RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
PDZD11-204ENST00000486461 PRDM10Q9NQV6 1147 aa8.83□□□□□ -1
PDZD11-204ENST00000486461 NLRP2Q9NX02 1062 aa8.83□□□□□ -1
PDZD11-204ENST00000486461 PLEKHG2Q9H7P9 1386 aa8.83□□□□□ -1
PDZD11-204ENST00000486461 C10orf71Q711Q0 1435 aa8.82□□□□□ -1
PDZD11-204ENST00000486461 HMGB2P26583 209 aaKnown RBP8.82□□□□□ -1
PDZD11-204ENST00000486461 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
PDZD11-204ENST00000486461 DDX54Q8TDD1 881 aaKnown RBP8.82□□□□□ -1
PDZD11-204ENST00000486461 MPHOSPH9Q99550 1183 aa8.82□□□□□ -1
PDZD11-204ENST00000486461 RRAGCQ9HB90 399 aa8.82□□□□□ -1
PDZD11-204ENST00000486461 BCS1LQ9Y276 419 aa8.82□□□□□ -1
PDZD11-204ENST00000486461 KCPQ6ZWJ8 1503 aa8.81□□□□□ -1
PDZD11-204ENST00000486461 SRPK2P78362 688 aaKnown RBP8.81□□□□□ -1
PDZD11-204ENST00000486461 C9orf131Q5VYM1 1079 aa8.81□□□□□ -1
PDZD11-204ENST00000486461 FOXN1O15353 648 aa8.8□□□□□ -1
PDZD11-204ENST00000486461 KDM2AQ9Y2K7 1162 aa8.8□□□□□ -1
PDZD11-204ENST00000486461 ANKRD36BQ8N2N9 1353 aa8.8□□□□□ -1
PDZD11-204ENST00000486461 ERBB3P21860 1342 aa8.8□□□□□ -1
PDZD11-204ENST00000486461 TNRC6CQ9HCJ0 1690 aaKnown RBP8.79□□□□□ -1
PDZD11-204ENST00000486461 USP47Q96K76 1375 aa8.79□□□□□ -1
PDZD11-204ENST00000486461 ABHD8Q96I13 439 aa8.79□□□□□ -1
PDZD11-204ENST00000486461 PXDNLA1KZ92 1463 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 NSD2O96028 1365 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 DOT1LQ8TEK3 1739 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 KIAA1210Q9ULL0 1709 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 FCHSD2O94868 740 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 CTCFP49711 727 aaPredicted RBP8.78□□□□□ -1
PDZD11-204ENST00000486461 TGFB2P61812 414 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 AIDAQ96BJ3 306 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 CABP1Q9NZU7 370 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 C5P01031 1676 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 USP54Q70EL1 1684 aa8.78□□□□□ -1
PDZD11-204ENST00000486461 PKD1L3Q7Z443 1732 aa8.77□□□□□ -1
PDZD11-204ENST00000486461 N4BP2Q86UW6 1770 aaPredicted RBP8.77□□□□□ -1.01
PDZD11-204ENST00000486461 A0A0G2JLW4 131 aa8.77□□□□□ -1.01
PDZD11-204ENST00000486461 AK7Q96M32 723 aa8.77□□□□□ -1.01
PDZD11-204ENST00000486461 CABP2Q9NPB3 220 aa8.77□□□□□ -1.01
PDZD11-204ENST00000486461 NFAT5O94916 1531 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 QRICH2Q9H0J4 1663 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 TAF1LQ8IZX4 1826 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 PHF14O94880 888 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 RGS19P49795 217 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 DCAF11Q8TEB1 546 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 RNF181Q9P0P0 153 aa8.76□□□□□ -1.01
PDZD11-204ENST00000486461 MKRN1Q9UHC7 482 aaKnown RBP8.76□□□□□ -1.01
PDZD11-204ENST00000486461 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
PDZD11-204ENST00000486461 CCDC85CA6NKD9 419 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 VEGFAP15692 232 aaPredicted RBP8.75□□□□□ -1.01
PDZD11-204ENST00000486461 SMIM5Q71RC9 77 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 PPARGC1BQ86YN6 1023 aaKnown RBP8.75□□□□□ -1.01
PDZD11-204ENST00000486461 ANKRD24Q8TF21 1146 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 TTC21BQ7Z4L5 1316 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 KIF13BQ9NQT8 1826 aa8.75□□□□□ -1.01
PDZD11-204ENST00000486461 LBX1P52954 281 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 STAC3Q96MF2 364 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 CREBZFQ9NS37 354 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 TTC21AQ8NDW8 1320 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 KIAA1551Q9HCM1 1747 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 PDE4DIPQ5VU43 2346 aa8.74□□□□□ -1.01
PDZD11-204ENST00000486461 ARFGEF1Q9Y6D6 1849 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 UBR3Q6ZT12 1888 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 MMP10P09238 476 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 DPEP1P16444 411 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 SSFA2P28290 1259 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 AMIGO3Q86WK7 504 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
PDZD11-204ENST00000486461 C4BP0C0L5 1744 aa8.73□□□□□ -1.01
PDZD11-204ENST00000486461 BRCA1P38398 1863 aaKnown RBP8.72□□□□□ -1.01
PDZD11-204ENST00000486461 TOGARAM1Q9Y4F4 1720 aa8.72□□□□□ -1.01
PDZD11-204ENST00000486461 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
PDZD11-204ENST00000486461 SBF1O95248 1867 aa8.72□□□□□ -1.01
PDZD11-204ENST00000486461 PALLDQ8WX93 1383 aa8.72□□□□□ -1.01
PDZD11-204ENST00000486461 LTN1O94822 1766 aa8.71□□□□□ -1.01
PDZD11-204ENST00000486461 ZC3H4Q9UPT8 1303 aaKnown RBP8.71□□□□□ -1.02
PDZD11-204ENST00000486461 CNTNAP1P78357 1384 aa8.71□□□□□ -1.02
PDZD11-204ENST00000486461 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
PDZD11-204ENST00000486461 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
PDZD11-204ENST00000486461 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
PDZD11-204ENST00000486461 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
PDZD11-204ENST00000486461 PIM2Q9P1W9 311 aa8.7□□□□□ -1.02
PDZD11-204ENST00000486461 CENPJQ9HC77 1338 aaPredicted RBP8.7□□□□□ -1.02
PDZD11-204ENST00000486461 HSPA8P11142 646 aaKnown RBP8.69□□□□□ -1.02
PDZD11-204ENST00000486461 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
PDZD11-204ENST00000486461 SMARCC1Q92922 1105 aaPredicted RBP8.69□□□□□ -1.02
PDZD11-204ENST00000486461 LTV1Q96GA3 475 aaPredicted RBP8.69□□□□□ -1.02
PDZD11-204ENST00000486461 CFAP44Q96MT7 982 aa8.69□□□□□ -1.02
PDZD11-204ENST00000486461 KCNA3P22001 575 aa8.68□□□□□ -1.02
PDZD11-204ENST00000486461 MPRIPQ6WCQ1 1025 aa8.68□□□□□ -1.02
PDZD11-204ENST00000486461 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
PDZD11-204ENST00000486461 FAM208AQ9UK61 1670 aaKnown RBP8.68□□□□□ -1.02
PDZD11-204ENST00000486461 GNPATO15228 680 aa8.67□□□□□ -1.02
PDZD11-204ENST00000486461 VEGFBP49765 207 aa8.67□□□□□ -1.02
PDZD11-204ENST00000486461 TMF1P82094 1093 aa8.67□□□□□ -1.02
PDZD11-204ENST00000486461 CHADLQ6NUI6 762 aa8.67□□□□□ -1.02
PDZD11-204ENST00000486461 VIRMAQ69YN4 1812 aaKnown RBP8.66□□□□□ -1.02
PDZD11-204ENST00000486461 USP31Q70CQ4 1352 aa8.66□□□□□ -1.02
PDZD11-204ENST00000486461 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
PDZD11-204ENST00000486461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDZD11-204ENST00000486461 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms