RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
PTPN7-213ENST00000486116 IL2RBP14784 551 aa14.25□□□□□ -0.13
PTPN7-213ENST00000486116 KCNH5Q8NCM2 988 aa14.25□□□□□ -0.13
PTPN7-213ENST00000486116 ERBB3P21860 1342 aa14.24□□□□□ -0.13
PTPN7-213ENST00000486116 CABP1Q9NZU7 370 aa14.24□□□□□ -0.13
PTPN7-213ENST00000486116 KIF13BQ9NQT8 1826 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 N4BP2Q86UW6 1770 aaPredicted RBP14.22□□□□□ -0.13
PTPN7-213ENST00000486116 PKD1L3Q7Z443 1732 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 NMRK2Q9NPI5 230 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 NLRP2Q9NX02 1062 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 FAM208AQ9UK61 1670 aaKnown RBP14.22□□□□□ -0.13
PTPN7-213ENST00000486116 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 ANKRD36BQ8N2N9 1353 aa14.22□□□□□ -0.13
PTPN7-213ENST00000486116 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
PTPN7-213ENST00000486116 TTC21BQ7Z4L5 1316 aa14.21□□□□□ -0.13
PTPN7-213ENST00000486116 CCNL1Q9UK58 526 aaPredicted RBP14.21□□□□□ -0.13
PTPN7-213ENST00000486116 RBM46Q8TBY0 533 aaKnown RBP14.2□□□□□ -0.14
PTPN7-213ENST00000486116 RGPD2P0DJD1 1756 aa14.19□□□□□ -0.14
PTPN7-213ENST00000486116 BRCA1P38398 1863 aaKnown RBP14.19□□□□□ -0.14
PTPN7-213ENST00000486116 PRIM1P49642 420 aaKnown RBP14.19□□□□□ -0.14
PTPN7-213ENST00000486116 DDX54Q8TDD1 881 aaKnown RBP14.19□□□□□ -0.14
PTPN7-213ENST00000486116 SYTL4Q96C24 671 aaPredicted RBP14.19□□□□□ -0.14
PTPN7-213ENST00000486116 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
PTPN7-213ENST00000486116 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
PTPN7-213ENST00000486116 TNRC6CQ9HCJ0 1690 aaKnown RBP14.17□□□□□ -0.14
PTPN7-213ENST00000486116 CENPJQ9HC77 1338 aaPredicted RBP14.16□□□□□ -0.14
PTPN7-213ENST00000486116 TTC21AQ8NDW8 1320 aa14.15□□□□□ -0.14
PTPN7-213ENST00000486116 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.14
PTPN7-213ENST00000486116 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.14
PTPN7-213ENST00000486116 FSTL1Q12841 308 aa14.15□□□□□ -0.14
PTPN7-213ENST00000486116 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
PTPN7-213ENST00000486116 ARFGEF1Q9Y6D6 1849 aa14.15□□□□□ -0.14
PTPN7-213ENST00000486116 PXDNLA1KZ92 1463 aa14.14□□□□□ -0.15
PTPN7-213ENST00000486116 NBPF1Q3BBV0 1214 aa14.14□□□□□ -0.15
PTPN7-213ENST00000486116 AMIGO3Q86WK7 504 aa14.14□□□□□ -0.15
PTPN7-213ENST00000486116 USP47Q96K76 1375 aa14.13□□□□□ -0.15
PTPN7-213ENST00000486116 ITGB4P16144 1822 aa14.13□□□□□ -0.15
PTPN7-213ENST00000486116 FLAD1Q8NFF5 587 aa14.12□□□□□ -0.15
PTPN7-213ENST00000486116 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
PTPN7-213ENST00000486116 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
PTPN7-213ENST00000486116 SBF1O95248 1867 aa14.11□□□□□ -0.15
PTPN7-213ENST00000486116 C10orf71Q711Q0 1435 aa14.11□□□□□ -0.15
PTPN7-213ENST00000486116 C16orf71Q8IYS4 520 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-213ENST00000486116 ZNF692Q9BU19 519 aaPredicted RBP14.11□□□□□ -0.15
PTPN7-213ENST00000486116 MAP2P11137 1827 aaKnown RBP14.1□□□□□ -0.15
PTPN7-213ENST00000486116 MEGF6O75095 1541 aa14.1□□□□□ -0.15
PTPN7-213ENST00000486116 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
PTPN7-213ENST00000486116 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
PTPN7-213ENST00000486116 PCDH10Q9P2E7 1040 aa14.09□□□□□ -0.15
PTPN7-213ENST00000486116 PLEKHG2Q9H7P9 1386 aa14.08□□□□□ -0.16
PTPN7-213ENST00000486116 ARHGAP27Q6ZUM4 889 aa14.07□□□□□ -0.16
PTPN7-213ENST00000486116 BCS1LQ9Y276 419 aa14.07□□□□□ -0.16
PTPN7-213ENST00000486116 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
PTPN7-213ENST00000486116 PHF14O94880 888 aa14.06□□□□□ -0.16
PTPN7-213ENST00000486116 EVC2Q86UK5 1308 aa14.06□□□□□ -0.16
PTPN7-213ENST00000486116 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
PTPN7-213ENST00000486116 NME9Q86XW9 330 aa14.05□□□□□ -0.16
PTPN7-213ENST00000486116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
PTPN7-213ENST00000486116 ZCRB1Q8TBF4 217 aaKnown RBP14.05□□□□□ -0.16
PTPN7-213ENST00000486116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
PTPN7-213ENST00000486116 SMC1BQ8NDV3 1235 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 LTV1Q96GA3 475 aaPredicted RBP14.04□□□□□ -0.16
PTPN7-213ENST00000486116 AK7Q96M32 723 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 RRAGCQ9HB90 399 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 RAB3GAP2Q9H2M9 1393 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 CD163L1Q9NR16 1453 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
PTPN7-213ENST00000486116 A0A0G2JLW4 131 aa14.03□□□□□ -0.16
PTPN7-213ENST00000486116 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
PTPN7-213ENST00000486116 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
PTPN7-213ENST00000486116 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
PTPN7-213ENST00000486116 SSFA2P28290 1259 aa14.01□□□□□ -0.17
PTPN7-213ENST00000486116 TGFB2P61812 414 aa14.01□□□□□ -0.17
PTPN7-213ENST00000486116 IP6K1Q92551 441 aa14.01□□□□□ -0.17
PTPN7-213ENST00000486116 CCDC88AQ3V6T2 1871 aa14□□□□□ -0.17
PTPN7-213ENST00000486116 FCHSD2O94868 740 aa14□□□□□ -0.17
PTPN7-213ENST00000486116 MMP10P09238 476 aa14□□□□□ -0.17
PTPN7-213ENST00000486116 TIAM2Q8IVF5 1701 aa14□□□□□ -0.17
PTPN7-213ENST00000486116 DPEP1P16444 411 aa13.99□□□□□ -0.17
PTPN7-213ENST00000486116 HMGB2P26583 209 aaKnown RBP13.99□□□□□ -0.17
PTPN7-213ENST00000486116 FAM161AQ3B820 660 aa13.99□□□□□ -0.17
PTPN7-213ENST00000486116 RNF181Q9P0P0 153 aa13.98□□□□□ -0.17
PTPN7-213ENST00000486116 MPRIPQ6WCQ1 1025 aa13.97□□□□□ -0.17
PTPN7-213ENST00000486116 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
PTPN7-213ENST00000486116 FOXN1O15353 648 aa13.96□□□□□ -0.17
PTPN7-213ENST00000486116 KCNA3P22001 575 aa13.96□□□□□ -0.17
PTPN7-213ENST00000486116 VIRMAQ69YN4 1812 aaKnown RBP13.96□□□□□ -0.17
PTPN7-213ENST00000486116 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
PTPN7-213ENST00000486116 EDC4Q6P2E9 1401 aaKnown RBP13.95□□□□□ -0.18
PTPN7-213ENST00000486116 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
PTPN7-213ENST00000486116 GNPATO15228 680 aa13.94□□□□□ -0.18
PTPN7-213ENST00000486116 HOXC9P31274 260 aa13.94□□□□□ -0.18
PTPN7-213ENST00000486116 SMARCC1Q92922 1105 aaPredicted RBP13.94□□□□□ -0.18
PTPN7-213ENST00000486116 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
PTPN7-213ENST00000486116 CGNL1Q0VF96 1302 aa13.93□□□□□ -0.18
PTPN7-213ENST00000486116 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
PTPN7-213ENST00000486116 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
PTPN7-213ENST00000486116 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
PTPN7-213ENST00000486116 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
PTPN7-213ENST00000486116 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms