RNA–Protein interactions for RNA: ENST00000485987.1

LMO7-211, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-211ENST00000485987 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
LMO7-211ENST00000485987 STK26Q9P289 416 aa11.92□□□□□ -0.5
LMO7-211ENST00000485987 KCNA6P17658 529 aa11.91□□□□□ -0.5
LMO7-211ENST00000485987 AMOTL2Q9Y2J4 779 aa11.91□□□□□ -0.5
LMO7-211ENST00000485987 PPLO60437 1756 aa11.9□□□□□ -0.5
LMO7-211ENST00000485987 POGKQ9P215 609 aa11.9□□□□□ -0.5
LMO7-211ENST00000485987 SETBP1Q9Y6X0 1596 aa11.9□□□□□ -0.5
LMO7-211ENST00000485987 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
LMO7-211ENST00000485987 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
LMO7-211ENST00000485987 NBPF1Q3BBV0 1214 aa11.89□□□□□ -0.51
LMO7-211ENST00000485987 ZNF687Q8N1G0 1237 aa11.89□□□□□ -0.51
LMO7-211ENST00000485987 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
LMO7-211ENST00000485987 DNAJB2P25686 324 aa11.88□□□□□ -0.51
LMO7-211ENST00000485987 PROSER2Q86WR7 435 aaPredicted RBP11.88□□□□□ -0.51
LMO7-211ENST00000485987 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
LMO7-211ENST00000485987 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
LMO7-211ENST00000485987 METP08581 1390 aa11.88□□□□□ -0.51
LMO7-211ENST00000485987 POLR1AO95602 1720 aaPredicted RBP11.88□□□□□ -0.51
LMO7-211ENST00000485987 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
LMO7-211ENST00000485987 IFT172Q9UG01 1749 aa11.87□□□□□ -0.51
LMO7-211ENST00000485987 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
LMO7-211ENST00000485987 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
LMO7-211ENST00000485987 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
LMO7-211ENST00000485987 EIF3AQ14152 1382 aaKnown RBP11.87□□□□□ -0.51
LMO7-211ENST00000485987 PBX2P40425 430 aa11.86□□□□□ -0.51
LMO7-211ENST00000485987 EIF4G2P78344 907 aaKnown RBP eCLIP11.86□□□□□ -0.51
LMO7-211ENST00000485987 TMEM134Q9H6X4 195 aa11.86□□□□□ -0.51
LMO7-211ENST00000485987 ABCC11Q96J66 1382 aa11.86□□□□□ -0.51
LMO7-211ENST00000485987 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
LMO7-211ENST00000485987 LAMC1P11047 1609 aa11.86□□□□□ -0.51
LMO7-211ENST00000485987 YTHDC2Q9H6S0 1430 aaKnown RBP11.86□□□□□ -0.51
LMO7-211ENST00000485987 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
LMO7-211ENST00000485987 GOPCQ9HD26 462 aa11.85□□□□□ -0.51
LMO7-211ENST00000485987 RABGEF1Q9UJ41 708 aa11.85□□□□□ -0.51
LMO7-211ENST00000485987 PRAM1Q96QH2 718 aa11.84□□□□□ -0.51
LMO7-211ENST00000485987 SEPT9Q9UHD8 586 aaPredicted RBP11.84□□□□□ -0.51
LMO7-211ENST00000485987 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
LMO7-211ENST00000485987 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
LMO7-211ENST00000485987 ZNF335Q9H4Z2 1342 aaPredicted RBP11.84□□□□□ -0.51
LMO7-211ENST00000485987 GPRASP1Q5JY77 1395 aa11.83□□□□□ -0.52
LMO7-211ENST00000485987 DDX11L8A8MPP1 907 aa11.83□□□□□ -0.52
LMO7-211ENST00000485987 SH3D19Q5HYK7 790 aa11.82□□□□□ -0.52
LMO7-211ENST00000485987 WAPLQ7Z5K2 1190 aa11.82□□□□□ -0.52
LMO7-211ENST00000485987 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
LMO7-211ENST00000485987 CENPJQ9HC77 1338 aaPredicted RBP11.82□□□□□ -0.52
LMO7-211ENST00000485987 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
LMO7-211ENST00000485987 CD46P15529 392 aa11.81□□□□□ -0.52
LMO7-211ENST00000485987 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
LMO7-211ENST00000485987 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
LMO7-211ENST00000485987 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
LMO7-211ENST00000485987 NRXN3Q9Y4C0 1643 aa11.81□□□□□ -0.52
LMO7-211ENST00000485987 USP47Q96K76 1375 aa11.8□□□□□ -0.52
LMO7-211ENST00000485987 TRPM1Q7Z4N2 1603 aa11.8□□□□□ -0.52
LMO7-211ENST00000485987 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
LMO7-211ENST00000485987 SULF1Q8IWU6 871 aa11.8□□□□□ -0.52
LMO7-211ENST00000485987 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 TECPR2O15040 1411 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 PTCH1Q13635 1447 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 PTPRUQ92729 1446 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 NKTRP30414 1462 aaKnown RBP11.79□□□□□ -0.52
LMO7-211ENST00000485987 ATF3P18847 181 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 SKIV2LQ15477 1246 aaKnown RBP11.79□□□□□ -0.52
LMO7-211ENST00000485987 CDCA8Q53HL2 280 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 MYSM1Q5VVJ2 828 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 ERICH6Q7L0X2 663 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 TBC1D2Q9BYX2 928 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 POLR3EQ9NVU0 708 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 CPS1P31327 1500 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 ROBO2Q9HCK4 1378 aa11.79□□□□□ -0.52
LMO7-211ENST00000485987 NCOA3Q9Y6Q9 1424 aa11.78□□□□□ -0.52
LMO7-211ENST00000485987 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
LMO7-211ENST00000485987 MSH6P52701 1360 aa11.78□□□□□ -0.52
LMO7-211ENST00000485987 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
LMO7-211ENST00000485987 DLC1Q96QB1 1528 aa11.77□□□□□ -0.52
LMO7-211ENST00000485987 TMF1P82094 1093 aa11.77□□□□□ -0.53
LMO7-211ENST00000485987 SWT1Q5T5J6 900 aaKnown RBP11.77□□□□□ -0.53
LMO7-211ENST00000485987 PROCA1Q8NCQ7 364 aaPredicted RBP11.77□□□□□ -0.53
LMO7-211ENST00000485987 EVC2Q86UK5 1308 aa11.77□□□□□ -0.53
LMO7-211ENST00000485987 SRPK2P78362 688 aaKnown RBP11.76□□□□□ -0.53
LMO7-211ENST00000485987 RDH13Q8NBN7 331 aa11.76□□□□□ -0.53
LMO7-211ENST00000485987 SPIRE2Q8WWL2 714 aa11.76□□□□□ -0.53
LMO7-211ENST00000485987 ASXL1Q8IXJ9 1541 aa11.76□□□□□ -0.53
LMO7-211ENST00000485987 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
LMO7-211ENST00000485987 FAM98CQ17RN3 349 aaKnown RBP11.75□□□□□ -0.53
LMO7-211ENST00000485987 HIRIP3Q9BW71 556 aaPredicted RBP11.75□□□□□ -0.53
LMO7-211ENST00000485987 WASLO00401 505 aaPredicted RBP11.74□□□□□ -0.53
LMO7-211ENST00000485987 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
LMO7-211ENST00000485987 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
LMO7-211ENST00000485987 NWD1Q149M9 1564 aa11.74□□□□□ -0.53
LMO7-211ENST00000485987 CHD2O14647 1828 aaKnown RBP11.74□□□□□ -0.53
LMO7-211ENST00000485987 TK2O00142 265 aa11.73□□□□□ -0.53
LMO7-211ENST00000485987 SETD1AO15047 1707 aaKnown RBP11.73□□□□□ -0.53
LMO7-211ENST00000485987 TOM1O60784 492 aa11.73□□□□□ -0.53
LMO7-211ENST00000485987 LSM11P83369 360 aaKnown RBP eCLIP11.73□□□□□ -0.53
LMO7-211ENST00000485987 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
LMO7-211ENST00000485987 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
LMO7-211ENST00000485987 SBNO2Q9Y2G9 1366 aa11.72□□□□□ -0.53
LMO7-211ENST00000485987 SLC10A3P09131 477 aa11.72□□□□□ -0.53
LMO7-211ENST00000485987 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms