RNA–Protein interactions for RNA: ENST00000485435.6

SURF4-206, Transcript of surfeit 4, humanhuman

TSL 1 (best) BASIC

Gene SURF4, Length 1,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4-206ENST00000485435 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
SURF4-206ENST00000485435 PNPLA7Q6ZV29 1317 aa25.77■■□□□ 1.72
SURF4-206ENST00000485435 NSD2O96028 1365 aa25.77■■□□□ 1.72
SURF4-206ENST00000485435 PRIM1P49642 420 aaKnown RBP25.76■■□□□ 1.71
SURF4-206ENST00000485435 MEGF6O75095 1541 aa25.75■■□□□ 1.71
SURF4-206ENST00000485435 ST20-MTHFSA0A0A6YYL1 179 aa25.75■■□□□ 1.71
SURF4-206ENST00000485435 POLD1P28340 1107 aa25.75■■□□□ 1.71
SURF4-206ENST00000485435 AMPHP49418 695 aa25.75■■□□□ 1.71
SURF4-206ENST00000485435 ZCRB1Q8TBF4 217 aaKnown RBP25.75■■□□□ 1.71
SURF4-206ENST00000485435 SYTL4Q96C24 671 aaPredicted RBP25.74■■□□□ 1.71
SURF4-206ENST00000485435 TFCP2L1Q9NZI6 479 aa25.73■■□□□ 1.71
SURF4-206ENST00000485435 CGNL1Q0VF96 1302 aa25.72■■□□□ 1.71
SURF4-206ENST00000485435 FBLN1P23142 703 aa25.7■■□□□ 1.7
SURF4-206ENST00000485435 GPR162Q16538 588 aa25.69■■□□□ 1.7
SURF4-206ENST00000485435 KCNQ4P56696 695 aa25.68■■□□□ 1.7
SURF4-206ENST00000485435 SMG6Q86US8 1419 aaKnown RBP25.68■■□□□ 1.7
SURF4-206ENST00000485435 NBPF6Q5VWK0 638 aa25.67■■□□□ 1.7
SURF4-206ENST00000485435 NBPF4Q96M43 638 aa25.67■■□□□ 1.7
SURF4-206ENST00000485435 CCNL1Q9UK58 526 aaPredicted RBP25.67■■□□□ 1.7
SURF4-206ENST00000485435 USP47Q96K76 1375 aa25.67■■□□□ 1.7
SURF4-206ENST00000485435 KIF20BQ96Q89 1820 aa25.66■■□□□ 1.7
SURF4-206ENST00000485435 FYB1O15117 783 aa25.66■■□□□ 1.7
SURF4-206ENST00000485435 RRS1Q15050 365 aaKnown RBP25.65■■□□□ 1.7
SURF4-206ENST00000485435 KIF24Q5T7B8 1368 aa25.65■■□□□ 1.7
SURF4-206ENST00000485435 C5P01031 1676 aa25.64■■□□□ 1.7
SURF4-206ENST00000485435 HMGB2P26583 209 aaKnown RBP25.64■■□□□ 1.7
SURF4-206ENST00000485435 KLHL34Q8N239 644 aa25.64■■□□□ 1.7
SURF4-206ENST00000485435 RAPGEF4Q8WZA2 1011 aa25.64■■□□□ 1.7
SURF4-206ENST00000485435 C1QTNF8P60827 252 aa25.63■■□□□ 1.69
SURF4-206ENST00000485435 INSRP06213 1382 aa25.63■■□□□ 1.69
SURF4-206ENST00000485435 TAF1LQ8IZX4 1826 aa25.63■■□□□ 1.69
SURF4-206ENST00000485435 TMF1P82094 1093 aa25.62■■□□□ 1.69
SURF4-206ENST00000485435 GGNBP2Q9H3C7 697 aa25.62■■□□□ 1.69
SURF4-206ENST00000485435 FLT4P35916 1363 aa25.6■■□□□ 1.69
SURF4-206ENST00000485435 TATP17735 454 aaPredicted RBP25.6■■□□□ 1.69
SURF4-206ENST00000485435 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
SURF4-206ENST00000485435 NLGN2Q8NFZ4 835 aa25.6■■□□□ 1.69
SURF4-206ENST00000485435 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
SURF4-206ENST00000485435 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
SURF4-206ENST00000485435 COL23A1Q86Y22 540 aaPredicted RBP25.59■■□□□ 1.69
SURF4-206ENST00000485435 PELP1Q8IZL8 1130 aaKnown RBP25.57■■□□□ 1.68
SURF4-206ENST00000485435 ITGB4P16144 1822 aa25.57■■□□□ 1.68
SURF4-206ENST00000485435 PKD1L3Q7Z443 1732 aa25.57■■□□□ 1.68
SURF4-206ENST00000485435 SENP3-EIF4A1A0A087X0R7 540 aa25.56■■□□□ 1.68
SURF4-206ENST00000485435 GRIN3BO60391 1043 aa25.56■■□□□ 1.68
SURF4-206ENST00000485435 CDCA8Q53HL2 280 aa25.56■■□□□ 1.68
SURF4-206ENST00000485435 HSP90AB2PQ58FF8 381 aa25.56■■□□□ 1.68
SURF4-206ENST00000485435 CEP350Q5VT06 3117 aa25.56■■□□□ 1.68
SURF4-206ENST00000485435 TOGARAM1Q9Y4F4 1720 aa25.55■■□□□ 1.68
SURF4-206ENST00000485435 MSH5O43196 834 aa25.55■■□□□ 1.68
SURF4-206ENST00000485435 FLAD1Q8NFF5 587 aa25.55■■□□□ 1.68
SURF4-206ENST00000485435 PALLDQ8WX93 1383 aa25.55■■□□□ 1.68
SURF4-206ENST00000485435 NCAPD2Q15021 1401 aa25.54■■□□□ 1.68
SURF4-206ENST00000485435 ANKRD26Q9UPS8 1709 aa25.53■■□□□ 1.68
SURF4-206ENST00000485435 C4BP0C0L5 1744 aa25.52■■□□□ 1.68
SURF4-206ENST00000485435 CYP27B1O15528 508 aa25.52■■□□□ 1.68
SURF4-206ENST00000485435 GIGYF1O75420 1035 aaPredicted RBP25.52■■□□□ 1.68
SURF4-206ENST00000485435 YBX3P16989 372 aaKnown RBP eCLIP25.52■■□□□ 1.687e-7■■□□□ 12.9
SURF4-206ENST00000485435 UBR3Q6ZT12 1888 aa25.5■■□□□ 1.67
SURF4-206ENST00000485435 SMARCC1Q92922 1105 aaPredicted RBP25.5■■□□□ 1.67
SURF4-206ENST00000485435 CD2APQ9Y5K6 639 aa25.5■■□□□ 1.67
SURF4-206ENST00000485435 MSL1Q68DK7 614 aa25.49■■□□□ 1.67
SURF4-206ENST00000485435 MPRIPQ6WCQ1 1025 aa25.49■■□□□ 1.67
SURF4-206ENST00000485435 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
SURF4-206ENST00000485435 MAP2P11137 1827 aaKnown RBP25.47■■□□□ 1.67
SURF4-206ENST00000485435 NKX1-1Q15270 411 aaPredicted RBP25.46■■□□□ 1.67
SURF4-206ENST00000485435 CARD14Q9BXL6 1004 aa25.46■■□□□ 1.67
SURF4-206ENST00000485435 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
SURF4-206ENST00000485435 AK7Q96M32 723 aa25.43■■□□□ 1.66
SURF4-206ENST00000485435 PIGBQ92521 554 aa25.42■■□□□ 1.66
SURF4-206ENST00000485435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.42■■□□□ 1.66
SURF4-206ENST00000485435 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
SURF4-206ENST00000485435 WASHC2AQ641Q2 1341 aa25.41■■□□□ 1.66
SURF4-206ENST00000485435 ATP10DQ9P241 1426 aa25.39■■□□□ 1.66
SURF4-206ENST00000485435 SSFA2P28290 1259 aa25.39■■□□□ 1.66
SURF4-206ENST00000485435 AMIGO3Q86WK7 504 aa25.39■■□□□ 1.66
SURF4-206ENST00000485435 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.38■■□□□ 1.65
SURF4-206ENST00000485435 PLEKHG2Q9H7P9 1386 aa25.38■■□□□ 1.65
SURF4-206ENST00000485435 ADCY9O60503 1353 aa25.37■■□□□ 1.65
SURF4-206ENST00000485435 LOC102724428A0A0B4J2F2 783 aa25.37■■□□□ 1.65
SURF4-206ENST00000485435 SIK1P57059 783 aa25.37■■□□□ 1.65
SURF4-206ENST00000485435 PPM1GO15355 546 aaPredicted RBP25.36■■□□□ 1.65
SURF4-206ENST00000485435 EYA1Q99502 592 aa25.36■■□□□ 1.65
SURF4-206ENST00000485435 TMOD3Q9NYL9 352 aa25.35■■□□□ 1.65
SURF4-206ENST00000485435 PHF14O94880 888 aa25.34■■□□□ 1.65
SURF4-206ENST00000485435 LINC00116Q8NCU8 138 aa25.34■■□□□ 1.65
SURF4-206ENST00000485435 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
SURF4-206ENST00000485435 IGSF1Q8N6C5 1336 aa25.33■■□□□ 1.64
SURF4-206ENST00000485435 PHKG2P15735 406 aa25.32■■□□□ 1.64
SURF4-206ENST00000485435 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
SURF4-206ENST00000485435 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
SURF4-206ENST00000485435 ZNF831Q5JPB2 1677 aa25.32■■□□□ 1.64
SURF4-206ENST00000485435 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
SURF4-206ENST00000485435 GPBP1L1Q9HC44 474 aaPredicted RBP25.3■■□□□ 1.64
SURF4-206ENST00000485435 ASAP1Q9ULH1 1129 aa25.3■■□□□ 1.64
SURF4-206ENST00000485435 ITPK1Q13572 414 aa25.29■■□□□ 1.64
SURF4-206ENST00000485435 SMIM5Q71RC9 77 aa25.29■■□□□ 1.64
SURF4-206ENST00000485435 CICQ96RK0 1608 aaPredicted RBP25.28■■□□□ 1.64
SURF4-206ENST00000485435 GNPATO15228 680 aa25.28■■□□□ 1.64
SURF4-206ENST00000485435 ATP6V1AP38606 617 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms