RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 SWI5Q1ZZU3 235 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 PKDCCQ504Y2 493 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 ZNF511Q8NB15 262 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 FOXJ1Q92949 421 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 SLAIN2Q9P270 581 aa7.33□□□□□ -1.24
XPA-203ENST00000485042 FCF1Q9Y324 198 aaKnown RBP7.33□□□□□ -1.24
XPA-203ENST00000485042 S1PR4O95977 384 aa7.32□□□□□ -1.24
XPA-203ENST00000485042 NBPF20Q3BBV1 942 aa7.32□□□□□ -1.24
XPA-203ENST00000485042 SEC13P55735 322 aa7.31□□□□□ -1.24
XPA-203ENST00000485042 SIRT1Q96EB6 747 aa7.31□□□□□ -1.24
XPA-203ENST00000485042 KIAA1024Q9UPX6 916 aa7.31□□□□□ -1.24
XPA-203ENST00000485042 PRMT3O60678 531 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 USP4Q13107 963 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 C4orf48Q5BLP8 95 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
XPA-203ENST00000485042 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 TREML4Q6UXN2 200 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 SIX5Q8N196 739 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 AMOTL2Q9Y2J4 779 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 PCDHB11Q9Y5F2 797 aa7.3□□□□□ -1.24
XPA-203ENST00000485042 ABCC9O60706 1549 aa7.29□□□□□ -1.24
XPA-203ENST00000485042 E9PSI1 815 aa7.29□□□□□ -1.24
XPA-203ENST00000485042 ZBTB7BO15156 539 aaPredicted RBP7.29□□□□□ -1.24
XPA-203ENST00000485042 SLC19A1P41440 591 aa7.29□□□□□ -1.24
XPA-203ENST00000485042 TPCN2Q8NHX9 752 aa7.29□□□□□ -1.24
XPA-203ENST00000485042 SFI1A8K8P3 1242 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 SERPINB4P48594 390 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 RAB15P59190 212 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 PRR20EP86478 221 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 PRR20CP86479 221 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 PRR20DP86480 221 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 PRR20BP86481 221 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 PRR20AP86496 221 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 EMID1Q96A84 441 aaPredicted RBP7.28□□□□□ -1.24
XPA-203ENST00000485042 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
XPA-203ENST00000485042 CDV3Q9UKY7 258 aaKnown RBP7.28□□□□□ -1.24
XPA-203ENST00000485042 SOWAHDA6NJG2 315 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
XPA-203ENST00000485042 DKK1O94907 266 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 SCNN1AP37088 669 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 SH3BP2P78314 561 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 CCDC125Q86Z20 511 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 SEPT12Q8IYM1 358 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 HINFPQ9BQA5 517 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 C1QTNF2Q9BXJ5 285 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 BIN2Q9UBW5 565 aaPredicted RBP7.27□□□□□ -1.25
XPA-203ENST00000485042 PCDHGA11Q9Y5H2 935 aa7.27□□□□□ -1.25
XPA-203ENST00000485042 ESPNB1AK53 854 aa7.26□□□□□ -1.25
XPA-203ENST00000485042 RNF223E7ERA6 249 aa7.26□□□□□ -1.25
XPA-203ENST00000485042 MYCP01106 439 aaPredicted RBP7.26□□□□□ -1.25
XPA-203ENST00000485042 SPRYD7Q5W111 196 aa7.26□□□□□ -1.25
XPA-203ENST00000485042 ZNF598Q86UK7 904 aaKnown RBP7.26□□□□□ -1.25
XPA-203ENST00000485042 TRMT44Q8IYL2 757 aaKnown RBP7.26□□□□□ -1.25
XPA-203ENST00000485042 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
XPA-203ENST00000485042 ABL1P00519 1130 aa7.25□□□□□ -1.25
XPA-203ENST00000485042 C1orf216Q8TAB5 229 aa7.25□□□□□ -1.25
XPA-203ENST00000485042 KCTD15Q96SI1 283 aaPredicted RBP7.25□□□□□ -1.25
XPA-203ENST00000485042 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
XPA-203ENST00000485042 FAM187AA6NFU0 413 aa7.24□□□□□ -1.25
XPA-203ENST00000485042 PPEF1O14829 653 aaPredicted RBP7.24□□□□□ -1.25
XPA-203ENST00000485042 LGR5O75473 907 aa7.24□□□□□ -1.25
XPA-203ENST00000485042 VASH1Q7L8A9 365 aaPredicted RBP7.24□□□□□ -1.25
XPA-203ENST00000485042 TRIM32Q13049 653 aa7.23□□□□□ -1.25
XPA-203ENST00000485042 OCLNQ16625 522 aa7.23□□□□□ -1.25
XPA-203ENST00000485042 ERCC3P19447 782 aa7.22□□□□□ -1.25
XPA-203ENST00000485042 VARSP26640 1264 aaKnown RBP7.22□□□□□ -1.25
XPA-203ENST00000485042 MARSP56192 900 aaKnown RBP7.22□□□□□ -1.25
XPA-203ENST00000485042 TAS1R3Q7RTX0 852 aa7.22□□□□□ -1.25
XPA-203ENST00000485042 TSEN2Q8NCE0 465 aaKnown RBP7.22□□□□□ -1.25
XPA-203ENST00000485042 GDF9O60383 454 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 ZNF211Q13398 564 aaPredicted RBP7.21□□□□□ -1.26
XPA-203ENST00000485042 ARID5BQ14865 1188 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
XPA-203ENST00000485042 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 MKNK1Q9BUB5 465 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 ANO2Q9NQ90 1003 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 AAASQ9NRG9 546 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 EGFL7Q9UHF1 273 aa7.21□□□□□ -1.26
XPA-203ENST00000485042 H3BRB1 525 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 ERVH48-1M5A8F1 160 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 TNFRSF10AO00220 468 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 ST8SIA5O15466 376 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 SCTRP47872 440 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 WNT7BP56706 349 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 GLYCTKQ8IVS8 523 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.2□□□□□ -1.26
XPA-203ENST00000485042 TUT1Q9H6E5 874 aaKnown RBP7.2□□□□□ -1.26
XPA-203ENST00000485042 MAP4K5Q9Y4K4 846 aa7.2□□□□□ -1.26
XPA-203ENST00000485042 M0R2N6 131 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 WEE1P30291 646 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 DNAJC14Q6Y2X3 702 aaPredicted RBP7.19□□□□□ -1.26
XPA-203ENST00000485042 LIAT1Q6ZQX7 453 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 EHBP1Q8NDI1 1231 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
XPA-203ENST00000485042 TRIM52Q96A61 297 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
XPA-203ENST00000485042 RBM47A0AV96 593 aaKnown RBP7.18□□□□□ -1.26
XPA-203ENST00000485042 WFS1O76024 890 aa7.18□□□□□ -1.26
XPA-203ENST00000485042 SKOR1P84550 965 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms