RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 SF3B2Q13435 895 aaKnown RBP18.83■□□□□ 0.6
HDLBP-240ENST00000484412 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
HDLBP-240ENST00000484412 USHBP1Q8N6Y0 703 aa18.82■□□□□ 0.6
HDLBP-240ENST00000484412 SPG7Q9UQ90 795 aa18.82■□□□□ 0.6
HDLBP-240ENST00000484412 MEGF6O75095 1541 aa18.82■□□□□ 0.6
HDLBP-240ENST00000484412 CFAP53Q96M91 514 aa18.81■□□□□ 0.6
HDLBP-240ENST00000484412 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
HDLBP-240ENST00000484412 TRIM37O94972 964 aa18.8■□□□□ 0.6
HDLBP-240ENST00000484412 BAG6P46379 1132 aa18.8■□□□□ 0.6
HDLBP-240ENST00000484412 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
HDLBP-240ENST00000484412 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
HDLBP-240ENST00000484412 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-240ENST00000484412 CYP27B1O15528 508 aa18.79■□□□□ 0.6
HDLBP-240ENST00000484412 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
HDLBP-240ENST00000484412 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
HDLBP-240ENST00000484412 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
HDLBP-240ENST00000484412 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
HDLBP-240ENST00000484412 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
HDLBP-240ENST00000484412 DDX54Q8TDD1 881 aaKnown RBP18.78■□□□□ 0.6
HDLBP-240ENST00000484412 NUDCQ9Y266 331 aa18.78■□□□□ 0.6
HDLBP-240ENST00000484412 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
HDLBP-240ENST00000484412 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
HDLBP-240ENST00000484412 FCHSD2O94868 740 aa18.75■□□□□ 0.59
HDLBP-240ENST00000484412 APBA3O96018 575 aa18.75■□□□□ 0.59
HDLBP-240ENST00000484412 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
HDLBP-240ENST00000484412 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
HDLBP-240ENST00000484412 PHKG2P15735 406 aa18.74■□□□□ 0.59
HDLBP-240ENST00000484412 DEFB132Q7Z7B7 95 aa18.73■□□□□ 0.59
HDLBP-240ENST00000484412 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
HDLBP-240ENST00000484412 MYBBP1AQ9BQG0 1328 aaKnown RBP18.73■□□□□ 0.59
HDLBP-240ENST00000484412 KCNQ2O43526 872 aa18.72■□□□□ 0.59
HDLBP-240ENST00000484412 HMGB2P26583 209 aaKnown RBP18.72■□□□□ 0.59
HDLBP-240ENST00000484412 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
HDLBP-240ENST00000484412 TNS1Q9HBL0 1735 aaKnown RBP18.71■□□□□ 0.59
HDLBP-240ENST00000484412 ERVV-2B6SEH9 535 aa18.71■□□□□ 0.59
HDLBP-240ENST00000484412 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
HDLBP-240ENST00000484412 EP400Q96L91 3159 aa18.71■□□□□ 0.59
HDLBP-240ENST00000484412 PRIM1P49642 420 aaKnown RBP18.7■□□□□ 0.58
HDLBP-240ENST00000484412 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
HDLBP-240ENST00000484412 PROM2Q8N271 834 aa18.7■□□□□ 0.58
HDLBP-240ENST00000484412 RGPD3A6NKT7 1758 aaPredicted RBP18.69■□□□□ 0.58
HDLBP-240ENST00000484412 RGPD4Q7Z3J3 1758 aa18.69■□□□□ 0.58
HDLBP-240ENST00000484412 CNGB1Q14028 1251 aaPredicted RBP18.69■□□□□ 0.58
HDLBP-240ENST00000484412 EZH2Q15910 746 aaKnown RBP18.69■□□□□ 0.58
HDLBP-240ENST00000484412 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
HDLBP-240ENST00000484412 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
HDLBP-240ENST00000484412 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
HDLBP-240ENST00000484412 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
HDLBP-240ENST00000484412 U2SURPO15042 1029 aaKnown RBP18.67■□□□□ 0.58
HDLBP-240ENST00000484412 HMOX1P09601 288 aa18.67■□□□□ 0.58
HDLBP-240ENST00000484412 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
HDLBP-240ENST00000484412 MTHFSDQ2M296 383 aaKnown RBP18.66■□□□□ 0.58
HDLBP-240ENST00000484412 SLC27A3Q5K4L6 730 aa18.65■□□□□ 0.58
HDLBP-240ENST00000484412 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
HDLBP-240ENST00000484412 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDLBP-240ENST00000484412 C1orf141Q5JVX7 400 aa18.64■□□□□ 0.57
HDLBP-240ENST00000484412 ZNF530Q6P9A1 599 aaPredicted RBP18.64■□□□□ 0.57
HDLBP-240ENST00000484412 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
HDLBP-240ENST00000484412 PLEKHF1Q96S99 279 aa18.64■□□□□ 0.57
HDLBP-240ENST00000484412 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
HDLBP-240ENST00000484412 TXNRD1Q16881 649 aa18.63■□□□□ 0.57
HDLBP-240ENST00000484412 PIGBQ92521 554 aa18.63■□□□□ 0.57
HDLBP-240ENST00000484412 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
HDLBP-240ENST00000484412 NBPF14Q5TI25 921 aa18.61■□□□□ 0.57
HDLBP-240ENST00000484412 PHACTR3Q96KR7 559 aa18.61■□□□□ 0.57
HDLBP-240ENST00000484412 KAT6BQ8WYB5 2073 aa18.61■□□□□ 0.57
HDLBP-240ENST00000484412 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
HDLBP-240ENST00000484412 MPRIPQ6WCQ1 1025 aa18.6■□□□□ 0.57
HDLBP-240ENST00000484412 BTAF1O14981 1849 aa18.6■□□□□ 0.57
HDLBP-240ENST00000484412 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
HDLBP-240ENST00000484412 SYTL4Q96C24 671 aaPredicted RBP18.59■□□□□ 0.57
HDLBP-240ENST00000484412 RREB1Q92766 1687 aa18.59■□□□□ 0.57
HDLBP-240ENST00000484412 ADAMTS7Q9UKP4 1686 aa18.59■□□□□ 0.57
HDLBP-240ENST00000484412 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.56
HDLBP-240ENST00000484412 ANP32CO43423 234 aa18.58■□□□□ 0.56
HDLBP-240ENST00000484412 TMOD3Q9NYL9 352 aa18.58■□□□□ 0.56
HDLBP-240ENST00000484412 ITGB4P16144 1822 aa18.58■□□□□ 0.56
HDLBP-240ENST00000484412 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
HDLBP-240ENST00000484412 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
HDLBP-240ENST00000484412 IL17REQ8NFR9 667 aa18.57■□□□□ 0.56
HDLBP-240ENST00000484412 LGR6Q9HBX8 967 aa18.57■□□□□ 0.56
HDLBP-240ENST00000484412 CABP4P57796 275 aa18.56■□□□□ 0.56
HDLBP-240ENST00000484412 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
HDLBP-240ENST00000484412 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
HDLBP-240ENST00000484412 LY75O60449 1722 aa18.56■□□□□ 0.56
HDLBP-240ENST00000484412 TOGARAM1Q9Y4F4 1720 aa18.55■□□□□ 0.56
HDLBP-240ENST00000484412 NEFMP07197 916 aa18.55■□□□□ 0.56
HDLBP-240ENST00000484412 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
HDLBP-240ENST00000484412 ATG3Q9NT62 314 aa18.55■□□□□ 0.56
HDLBP-240ENST00000484412 CEMIPQ8WUJ3 1361 aa18.55■□□□□ 0.56
HDLBP-240ENST00000484412 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
HDLBP-240ENST00000484412 SLC15A2Q16348 729 aa18.53■□□□□ 0.56
HDLBP-240ENST00000484412 MAP3K5Q99683 1374 aa18.53■□□□□ 0.56
HDLBP-240ENST00000484412 NCBP3Q53F19 620 aaKnown RBP18.52■□□□□ 0.56
HDLBP-240ENST00000484412 AKT1S1Q96B36 256 aa18.52■□□□□ 0.56
HDLBP-240ENST00000484412 ASAP1Q9ULH1 1129 aa18.52■□□□□ 0.56
HDLBP-240ENST00000484412 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
HDLBP-240ENST00000484412 PALLDQ8WX93 1383 aa18.52■□□□□ 0.55
HDLBP-240ENST00000484412 NUP188Q5SRE5 1749 aa18.52■□□□□ 0.55
HDLBP-240ENST00000484412 ZNF831Q5JPB2 1677 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms