RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
RAB11FIP3-209ENST00000483002 MEGF6O75095 1541 aa23.03■■□□□ 1.28
RAB11FIP3-209ENST00000483002 SMG6Q86US8 1419 aaKnown RBP23.02■■□□□ 1.28
RAB11FIP3-209ENST00000483002 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
RAB11FIP3-209ENST00000483002 KCNQ4P56696 695 aa23.01■■□□□ 1.27
RAB11FIP3-209ENST00000483002 SLC27A3Q5K4L6 730 aa23.01■■□□□ 1.27
RAB11FIP3-209ENST00000483002 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
RAB11FIP3-209ENST00000483002 YY1P25490 414 aa23■■□□□ 1.27
RAB11FIP3-209ENST00000483002 POLR3GLQ9BT43 218 aa23■■□□□ 1.27
RAB11FIP3-209ENST00000483002 INSRP06213 1382 aa23■■□□□ 1.27
RAB11FIP3-209ENST00000483002 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
RAB11FIP3-209ENST00000483002 EMILIN1Q9Y6C2 1016 aa22.99■■□□□ 1.27
RAB11FIP3-209ENST00000483002 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
RAB11FIP3-209ENST00000483002 FLT4P35916 1363 aa22.99■■□□□ 1.27
RAB11FIP3-209ENST00000483002 KIF20BQ96Q89 1820 aa22.98■■□□□ 1.27
RAB11FIP3-209ENST00000483002 PPM1GO15355 546 aaPredicted RBP22.98■■□□□ 1.27
RAB11FIP3-209ENST00000483002 AKT1S1Q96B36 256 aa22.98■■□□□ 1.27
RAB11FIP3-209ENST00000483002 FHDC1Q9C0D6 1143 aaPredicted RBP22.98■■□□□ 1.27
RAB11FIP3-209ENST00000483002 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
RAB11FIP3-209ENST00000483002 MYOM1P52179 1685 aa22.97■■□□□ 1.27
RAB11FIP3-209ENST00000483002 SGIP1Q9BQI5 828 aa22.97■■□□□ 1.27
RAB11FIP3-209ENST00000483002 SYT17Q9BSW7 474 aa22.97■■□□□ 1.27
RAB11FIP3-209ENST00000483002 NSD2O96028 1365 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 KIF24Q5T7B8 1368 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 DOT1LQ8TEK3 1739 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 ARXQ96QS3 562 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 SHANK3Q9BYB0 1731 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 TFCP2L1Q9NZI6 479 aa22.95■■□□□ 1.26
RAB11FIP3-209ENST00000483002 CCNL1Q9UK58 526 aaPredicted RBP22.93■■□□□ 1.26
RAB11FIP3-209ENST00000483002 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
RAB11FIP3-209ENST00000483002 PCDH11XQ9BZA7 1347 aa22.91■■□□□ 1.26
RAB11FIP3-209ENST00000483002 PCDH11YQ9BZA8 1340 aa22.91■■□□□ 1.26
RAB11FIP3-209ENST00000483002 SLC16A10Q8TF71 515 aa22.91■■□□□ 1.26
RAB11FIP3-209ENST00000483002 CYP27B1O15528 508 aa22.89■■□□□ 1.25
RAB11FIP3-209ENST00000483002 EIF4G2P78344 907 aaKnown RBP eCLIP22.89■■□□□ 1.25
RAB11FIP3-209ENST00000483002 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
RAB11FIP3-209ENST00000483002 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
RAB11FIP3-209ENST00000483002 WASHC2AQ641Q2 1341 aa22.88■■□□□ 1.25
RAB11FIP3-209ENST00000483002 TNNT2P45379 298 aaPredicted RBP22.88■■□□□ 1.25
RAB11FIP3-209ENST00000483002 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
RAB11FIP3-209ENST00000483002 POLD1P28340 1107 aa22.87■■□□□ 1.25
RAB11FIP3-209ENST00000483002 POLKQ9UBT6 870 aa22.87■■□□□ 1.25
RAB11FIP3-209ENST00000483002 LY75O60449 1722 aa22.87■■□□□ 1.25
RAB11FIP3-209ENST00000483002 MSH5O43196 834 aa22.86■■□□□ 1.25
RAB11FIP3-209ENST00000483002 KLHL34Q8N239 644 aa22.86■■□□□ 1.25
RAB11FIP3-209ENST00000483002 EYA1Q99502 592 aa22.86■■□□□ 1.25
RAB11FIP3-209ENST00000483002 MAP2P11137 1827 aaKnown RBP22.86■■□□□ 1.25
RAB11FIP3-209ENST00000483002 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
RAB11FIP3-209ENST00000483002 PANK3Q9H999 370 aa22.83■■□□□ 1.25
RAB11FIP3-209ENST00000483002 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
RAB11FIP3-209ENST00000483002 QSER1Q2KHR3 1735 aa22.82■■□□□ 1.24
RAB11FIP3-209ENST00000483002 PALLDQ8WX93 1383 aa22.81■■□□□ 1.24
RAB11FIP3-209ENST00000483002 TUBGCP6Q96RT7 1819 aa22.81■■□□□ 1.24
RAB11FIP3-209ENST00000483002 MAP3K5Q99683 1374 aa22.8■■□□□ 1.24
RAB11FIP3-209ENST00000483002 PIGBQ92521 554 aa22.8■■□□□ 1.24
RAB11FIP3-209ENST00000483002 SMARCC1Q92922 1105 aaPredicted RBP22.8■■□□□ 1.24
RAB11FIP3-209ENST00000483002 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
RAB11FIP3-209ENST00000483002 NKX1-1Q15270 411 aaPredicted RBP22.79■■□□□ 1.24
RAB11FIP3-209ENST00000483002 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
RAB11FIP3-209ENST00000483002 HMGB2P26583 209 aaKnown RBP22.78■■□□□ 1.24
RAB11FIP3-209ENST00000483002 GPR162Q16538 588 aa22.78■■□□□ 1.24
RAB11FIP3-209ENST00000483002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAB11FIP3-209ENST00000483002 ANKRD26Q9UPS8 1709 aa22.78■■□□□ 1.24
RAB11FIP3-209ENST00000483002 PKD1L3Q7Z443 1732 aa22.77■■□□□ 1.23
RAB11FIP3-209ENST00000483002 ITGB4P16144 1822 aa22.76■■□□□ 1.23
RAB11FIP3-209ENST00000483002 MSL1Q68DK7 614 aa22.76■■□□□ 1.23
RAB11FIP3-209ENST00000483002 IFNL2Q8IZJ0 200 aa22.76■■□□□ 1.23
RAB11FIP3-209ENST00000483002 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
RAB11FIP3-209ENST00000483002 TOGARAM1Q9Y4F4 1720 aa22.74■■□□□ 1.23
RAB11FIP3-209ENST00000483002 PHKG2P15735 406 aa22.74■■□□□ 1.23
RAB11FIP3-209ENST00000483002 FLAD1Q8NFF5 587 aa22.74■■□□□ 1.23
RAB11FIP3-209ENST00000483002 TMOD3Q9NYL9 352 aa22.74■■□□□ 1.23
RAB11FIP3-209ENST00000483002 UTRNP46939 3433 aa22.74■■□□□ 1.23
RAB11FIP3-209ENST00000483002 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
RAB11FIP3-209ENST00000483002 AK7Q96M32 723 aa22.73■■□□□ 1.23
RAB11FIP3-209ENST00000483002 C5P01031 1676 aa22.73■■□□□ 1.23
RAB11FIP3-209ENST00000483002 COL24A1Q17RW2 1714 aa22.73■■□□□ 1.23
RAB11FIP3-209ENST00000483002 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
RAB11FIP3-209ENST00000483002 ASAP1Q9ULH1 1129 aa22.72■■□□□ 1.23
RAB11FIP3-209ENST00000483002 ZNF784Q8NCA9 323 aaPredicted RBP22.71■■□□□ 1.23
RAB11FIP3-209ENST00000483002 TAF1LQ8IZX4 1826 aa22.71■■□□□ 1.23
RAB11FIP3-209ENST00000483002 LOC102724428A0A0B4J2F2 783 aa22.7■■□□□ 1.22
RAB11FIP3-209ENST00000483002 SIK1P57059 783 aa22.7■■□□□ 1.22
RAB11FIP3-209ENST00000483002 SMIM5Q71RC9 77 aa22.7■■□□□ 1.22
RAB11FIP3-209ENST00000483002 CHD4Q14839 1912 aa22.7■■□□□ 1.22
RAB11FIP3-209ENST00000483002 IGSF1Q8N6C5 1336 aa22.69■■□□□ 1.22
RAB11FIP3-209ENST00000483002 PHF14O94880 888 aa22.69■■□□□ 1.22
RAB11FIP3-209ENST00000483002 KNSTRNQ9Y448 316 aa22.69■■□□□ 1.22
RAB11FIP3-209ENST00000483002 AMIGO3Q86WK7 504 aa22.68■■□□□ 1.22
RAB11FIP3-209ENST00000483002 ATP6V1AP38606 617 aa22.67■■□□□ 1.22
RAB11FIP3-209ENST00000483002 PLEKHO1Q53GL0 409 aaPredicted RBP22.67■■□□□ 1.22
RAB11FIP3-209ENST00000483002 LINC00116Q8NCU8 138 aa22.67■■□□□ 1.22
RAB11FIP3-209ENST00000483002 C4BP0C0L5 1744 aa22.66■■□□□ 1.22
RAB11FIP3-209ENST00000483002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
RAB11FIP3-209ENST00000483002 ATG3Q9NT62 314 aa22.66■■□□□ 1.22
RAB11FIP3-209ENST00000483002 ITPK1Q13572 414 aa22.65■■□□□ 1.22
RAB11FIP3-209ENST00000483002 ERVV-2B6SEH9 535 aa22.63■■□□□ 1.21
RAB11FIP3-209ENST00000483002 HSP90AB1P08238 724 aaKnown RBP22.63■■□□□ 1.21
RAB11FIP3-209ENST00000483002 ZNF530Q6P9A1 599 aaPredicted RBP22.63■■□□□ 1.21
RAB11FIP3-209ENST00000483002 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms