RNA–Protein interactions for RNA: ENST00000482405.7

CD99-208, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 2

Gene CD99, Length 842 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-208ENST00000482405 PTF1AQ7RTS3 328 aa28.4■■■□□ 2.14
CD99-208ENST00000482405 EZH2Q15910 746 aaKnown RBP28.39■■■□□ 2.14
CD99-208ENST00000482405 SHANK3Q9BYB0 1731 aa28.39■■■□□ 2.14
CD99-208ENST00000482405 IGSF1Q8N6C5 1336 aa28.39■■■□□ 2.13
CD99-208ENST00000482405 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
CD99-208ENST00000482405 PLSCR1O15162 318 aa28.37■■■□□ 2.13
CD99-208ENST00000482405 MTHFSP49914 203 aa28.36■■■□□ 2.13
CD99-208ENST00000482405 KCNQ2O43526 872 aa28.35■■■□□ 2.13
CD99-208ENST00000482405 IL13P35225 146 aa28.34■■■□□ 2.13
CD99-208ENST00000482405 NHSQ6T4R5 1651 aa28.34■■■□□ 2.13
CD99-208ENST00000482405 PLEKHG2Q9H7P9 1386 aa28.34■■■□□ 2.13
CD99-208ENST00000482405 ACSBG1Q96GR2 724 aa28.33■■■□□ 2.13
CD99-208ENST00000482405 PCDH11XQ9BZA7 1347 aa28.32■■■□□ 2.12
CD99-208ENST00000482405 PCDH11YQ9BZA8 1340 aa28.32■■■□□ 2.12
CD99-208ENST00000482405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.31■■■□□ 2.12
CD99-208ENST00000482405 PKD1L3Q7Z443 1732 aa28.31■■■□□ 2.12
CD99-208ENST00000482405 RGPD3A6NKT7 1758 aaPredicted RBP28.31■■■□□ 2.12
CD99-208ENST00000482405 RGPD4Q7Z3J3 1758 aa28.31■■■□□ 2.12
CD99-208ENST00000482405 RREB1Q92766 1687 aa28.3■■■□□ 2.12
CD99-208ENST00000482405 CYP27B1O15528 508 aa28.29■■■□□ 2.12
CD99-208ENST00000482405 CNGB1Q14028 1251 aaPredicted RBP28.28■■■□□ 2.12
CD99-208ENST00000482405 SPG7Q9UQ90 795 aa28.27■■■□□ 2.12
CD99-208ENST00000482405 KDRP35968 1356 aa28.26■■■□□ 2.12
CD99-208ENST00000482405 PROM2Q8N271 834 aa28.25■■■□□ 2.11
CD99-208ENST00000482405 COL3A1P02461 1466 aaPredicted RBP28.25■■■□□ 2.11
CD99-208ENST00000482405 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
CD99-208ENST00000482405 PRIM1P49642 420 aaKnown RBP28.23■■■□□ 2.11
CD99-208ENST00000482405 AEBP1Q8IUX7 1158 aa28.23■■■□□ 2.11
CD99-208ENST00000482405 NUP188Q5SRE5 1749 aa28.23■■■□□ 2.11
CD99-208ENST00000482405 DIAPH1O60610 1272 aaKnown RBP28.22■■■□□ 2.11
CD99-208ENST00000482405 DOT1LQ8TEK3 1739 aa28.21■■■□□ 2.11
CD99-208ENST00000482405 SULT6B1Q6IMI4 303 aa28.21■■■□□ 2.11
CD99-208ENST00000482405 BTAF1O14981 1849 aa28.2■■■□□ 2.11
CD99-208ENST00000482405 PPP2R1AP30153 589 aa28.2■■■□□ 2.1
CD99-208ENST00000482405 PHKG2P15735 406 aa28.19■■■□□ 2.1
CD99-208ENST00000482405 TXNRD1Q16881 649 aa28.19■■■□□ 2.1
CD99-208ENST00000482405 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
CD99-208ENST00000482405 AMOTQ4VCS5 1084 aa28.17■■■□□ 2.1
CD99-208ENST00000482405 SYTL4Q96C24 671 aaPredicted RBP28.17■■■□□ 2.1
CD99-208ENST00000482405 DDX10Q13206 875 aaKnown RBP28.16■■■□□ 2.1
CD99-208ENST00000482405 PLEKHO1Q53GL0 409 aaPredicted RBP28.16■■■□□ 2.1
CD99-208ENST00000482405 NBPF14Q5TI25 921 aa28.15■■■□□ 2.1
CD99-208ENST00000482405 PSDA5PKW4 1024 aaPredicted RBP28.14■■■□□ 2.1
CD99-208ENST00000482405 R3HDM1Q15032 1099 aaKnown RBP28.14■■■□□ 2.1
CD99-208ENST00000482405 TOGARAM1Q9Y4F4 1720 aa28.14■■■□□ 2.1
CD99-208ENST00000482405 HMOX1P09601 288 aa28.11■■■□□ 2.09
CD99-208ENST00000482405 CFAP53Q96M91 514 aa28.11■■■□□ 2.09
CD99-208ENST00000482405 ANO8Q9HCE9 1232 aaPredicted RBP28.11■■■□□ 2.09
CD99-208ENST00000482405 KAT6BQ8WYB5 2073 aa28.11■■■□□ 2.09
CD99-208ENST00000482405 ZNF530Q6P9A1 599 aaPredicted RBP28.09■■■□□ 2.09
CD99-208ENST00000482405 LRRC4BQ9NT99 713 aa28.09■■■□□ 2.09
CD99-208ENST00000482405 HSP90AB1P08238 724 aaKnown RBP28.08■■■□□ 2.09
CD99-208ENST00000482405 SLC27A3Q5K4L6 730 aa28.08■■■□□ 2.09
CD99-208ENST00000482405 MPRIPQ6WCQ1 1025 aa28.07■■■□□ 2.08
CD99-208ENST00000482405 PIGBQ92521 554 aa28.07■■■□□ 2.08
CD99-208ENST00000482405 PAPPAQ13219 1627 aa28.07■■■□□ 2.08
CD99-208ENST00000482405 DCAF5Q96JK2 942 aa28.06■■■□□ 2.08
CD99-208ENST00000482405 U2SURPO15042 1029 aaKnown RBP28.05■■■□□ 2.08
CD99-208ENST00000482405 KDM6AO15550 1401 aaPredicted RBP28.05■■■□□ 2.08
CD99-208ENST00000482405 LY75O60449 1722 aa28.05■■■□□ 2.08
CD99-208ENST00000482405 RALBP1Q15311 655 aa28.05■■■□□ 2.08
CD99-208ENST00000482405 ITGB4P16144 1822 aa28.04■■■□□ 2.08
CD99-208ENST00000482405 SRCAPQ6ZRS2 3230 aa28.03■■■□□ 2.08
CD99-208ENST00000482405 ERVV-2B6SEH9 535 aa28.03■■■□□ 2.08
CD99-208ENST00000482405 C1orf141Q5JVX7 400 aa28.03■■■□□ 2.08
CD99-208ENST00000482405 SLC15A2Q16348 729 aa28.02■■■□□ 2.08
CD99-208ENST00000482405 AKAP4Q5JQC9 854 aa28.02■■■□□ 2.08
CD99-208ENST00000482405 TMOD3Q9NYL9 352 aa28.02■■■□□ 2.08
CD99-208ENST00000482405 NUDCQ9Y266 331 aa28.02■■■□□ 2.08
CD99-208ENST00000482405 PALLDQ8WX93 1383 aa28.01■■■□□ 2.07
CD99-208ENST00000482405 STK32BQ9NY57 414 aa28.01■■■□□ 2.07
CD99-208ENST00000482405 MTHFSDQ2M296 383 aaKnown RBP28■■■□□ 2.07
CD99-208ENST00000482405 SMARCC1Q92922 1105 aaPredicted RBP28■■■□□ 2.07
CD99-208ENST00000482405 RSPH6AQ9H0K4 717 aa27.99■■■□□ 2.07
CD99-208ENST00000482405 CCNL1Q9UK58 526 aaPredicted RBP27.99■■■□□ 2.07
CD99-208ENST00000482405 AKT1S1Q96B36 256 aa27.98■■■□□ 2.07
CD99-208ENST00000482405 KCNQ4P56696 695 aa27.97■■■□□ 2.07
CD99-208ENST00000482405 ZNF827Q17R98 1081 aa27.97■■■□□ 2.07
CD99-208ENST00000482405 LRP5O75197 1615 aa27.96■■■□□ 2.07
CD99-208ENST00000482405 U2AF1L5P0DN76 240 aaPredicted RBP27.95■■■□□ 2.06
CD99-208ENST00000482405 U2AF1Q01081 240 aaKnown RBP eCLIP27.95■■■□□ 2.06
CD99-208ENST00000482405 ASAP1Q9ULH1 1129 aa27.95■■■□□ 2.06
CD99-208ENST00000482405 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
CD99-208ENST00000482405 FCHSD2O94868 740 aa27.94■■■□□ 2.06
CD99-208ENST00000482405 ATG3Q9NT62 314 aa27.94■■■□□ 2.06
CD99-208ENST00000482405 PRKAR2BP31323 418 aa27.93■■■□□ 2.06
CD99-208ENST00000482405 CABP4P57796 275 aa27.93■■■□□ 2.06
CD99-208ENST00000482405 CASZ1Q86V15 1759 aa27.93■■■□□ 2.06
CD99-208ENST00000482405 MYBBP1AQ9BQG0 1328 aaKnown RBP27.92■■■□□ 2.06
CD99-208ENST00000482405 GAS2L2Q8NHY3 880 aa27.92■■■□□ 2.06
CD99-208ENST00000482405 ADAMTS7Q9UKP4 1686 aa27.91■■■□□ 2.06
CD99-208ENST00000482405 PHACTR3Q96KR7 559 aa27.91■■■□□ 2.06
CD99-208ENST00000482405 PDGFDQ9GZP0 370 aaPredicted RBP27.91■■■□□ 2.06
CD99-208ENST00000482405 LGR6Q9HBX8 967 aa27.91■■■□□ 2.06
CD99-208ENST00000482405 LOC102724428A0A0B4J2F2 783 aa27.9■■■□□ 2.06
CD99-208ENST00000482405 RNMTO43148 476 aaKnown RBP27.9■■■□□ 2.06
CD99-208ENST00000482405 HMGB2P26583 209 aaKnown RBP27.9■■■□□ 2.06
CD99-208ENST00000482405 SIK1P57059 783 aa27.9■■■□□ 2.06
CD99-208ENST00000482405 PRKRIP1Q9H875 184 aaPredicted RBP27.9■■■□□ 2.06
CD99-208ENST00000482405 SCN11AQ9UI33 1791 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms