RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 ATP10DQ9P241 1426 aa17.55■□□□□ 0.4
NR1H3-220ENST00000481020 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
NR1H3-220ENST00000481020 DYNC1I1O14576 645 aa17.54■□□□□ 0.4
NR1H3-220ENST00000481020 IL13P35225 146 aa17.54■□□□□ 0.4
NR1H3-220ENST00000481020 IDI1Q13907 227 aa17.54■□□□□ 0.4
NR1H3-220ENST00000481020 SYAP1Q96A49 352 aaPredicted RBP17.54■□□□□ 0.4
NR1H3-220ENST00000481020 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
NR1H3-220ENST00000481020 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
NR1H3-220ENST00000481020 IL17RAQ96F46 866 aa17.53■□□□□ 0.4
NR1H3-220ENST00000481020 C1orf115Q9H7X2 142 aa17.53■□□□□ 0.4
NR1H3-220ENST00000481020 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
NR1H3-220ENST00000481020 ERC2O15083 957 aa17.52■□□□□ 0.4
NR1H3-220ENST00000481020 HMMRO75330 724 aa17.52■□□□□ 0.4
NR1H3-220ENST00000481020 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
NR1H3-220ENST00000481020 INTS4Q96HW7 963 aaKnown RBP17.52■□□□□ 0.4
NR1H3-220ENST00000481020 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.4
NR1H3-220ENST00000481020 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.39
NR1H3-220ENST00000481020 PHF14O94880 888 aa17.52■□□□□ 0.39
NR1H3-220ENST00000481020 ANAPC15P60006 121 aa17.52■□□□□ 0.39
NR1H3-220ENST00000481020 RBSNQ9H1K0 784 aa17.52■□□□□ 0.39
NR1H3-220ENST00000481020 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
NR1H3-220ENST00000481020 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
NR1H3-220ENST00000481020 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
NR1H3-220ENST00000481020 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
NR1H3-220ENST00000481020 SDSP20132 328 aa17.5■□□□□ 0.39
NR1H3-220ENST00000481020 FAM184AQ8NB25 1140 aa17.5■□□□□ 0.39
NR1H3-220ENST00000481020 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
NR1H3-220ENST00000481020 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
NR1H3-220ENST00000481020 STK26Q9P289 416 aa17.5■□□□□ 0.39
NR1H3-220ENST00000481020 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
NR1H3-220ENST00000481020 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
NR1H3-220ENST00000481020 MCCP23508 829 aa17.49■□□□□ 0.39
NR1H3-220ENST00000481020 CUL4AQ13619 759 aa17.49■□□□□ 0.39
NR1H3-220ENST00000481020 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
NR1H3-220ENST00000481020 RGS12O14924 1447 aa17.49■□□□□ 0.39
NR1H3-220ENST00000481020 CFAP65Q6ZU64 1925 aaKnown RBP17.48■□□□□ 0.39
NR1H3-220ENST00000481020 UVSSAQ2YD98 709 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 SASS6Q6UVJ0 657 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 GPT2Q8TD30 523 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 NRKQ7Z2Y5 1582 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
NR1H3-220ENST00000481020 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
NR1H3-220ENST00000481020 BRD1O95696 1058 aa17.47■□□□□ 0.39
NR1H3-220ENST00000481020 ZDHHC9Q9Y397 364 aa17.47■□□□□ 0.39
NR1H3-220ENST00000481020 MAP2P11137 1827 aaKnown RBP17.45■□□□□ 0.38
NR1H3-220ENST00000481020 ARHGEF10O15013 1369 aa17.45■□□□□ 0.38
NR1H3-220ENST00000481020 LETM1O95202 739 aaPredicted RBP17.44■□□□□ 0.38
NR1H3-220ENST00000481020 R3HCC1Q9Y3T6 440 aaKnown RBP17.44■□□□□ 0.38
NR1H3-220ENST00000481020 CHL1O00533 1208 aa17.44■□□□□ 0.38
NR1H3-220ENST00000481020 HMOX1P09601 288 aa17.44■□□□□ 0.38
NR1H3-220ENST00000481020 TSPY26PQ9H489 355 aa17.44■□□□□ 0.38
NR1H3-220ENST00000481020 TMEM63CQ9P1W3 806 aa17.44■□□□□ 0.38
NR1H3-220ENST00000481020 AGLP35573 1532 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 UQCRHLA0A096LP55 91 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 UQCRHP07919 91 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 CCT4P50991 539 aaKnown RBP17.43■□□□□ 0.38
NR1H3-220ENST00000481020 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
NR1H3-220ENST00000481020 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 PRIMPOLQ96LW4 560 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
NR1H3-220ENST00000481020 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 DLG5Q8TDM6 1919 aa17.43■□□□□ 0.38
NR1H3-220ENST00000481020 HMGN5P82970 282 aaKnown RBP17.42■□□□□ 0.38
NR1H3-220ENST00000481020 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
NR1H3-220ENST00000481020 ZGPATQ8N5A5 531 aaKnown RBP17.42■□□□□ 0.38
NR1H3-220ENST00000481020 TMX3Q96JJ7 454 aa17.42■□□□□ 0.38
NR1H3-220ENST00000481020 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
NR1H3-220ENST00000481020 AOX1Q06278 1338 aa17.42■□□□□ 0.38
NR1H3-220ENST00000481020 PKP1Q13835 747 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 COG3Q96JB2 828 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 MON2Q7Z3U7 1717 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
NR1H3-220ENST00000481020 PDE1AP54750 535 aa17.41■□□□□ 0.38
NR1H3-220ENST00000481020 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
NR1H3-220ENST00000481020 MSH6P52701 1360 aa17.4■□□□□ 0.38
NR1H3-220ENST00000481020 SYCE3A1L190 88 aa17.4■□□□□ 0.38
NR1H3-220ENST00000481020 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
NR1H3-220ENST00000481020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.37
NR1H3-220ENST00000481020 C16orf71Q8IYS4 520 aaPredicted RBP17.39■□□□□ 0.37
NR1H3-220ENST00000481020 EMILIN1Q9Y6C2 1016 aa17.39■□□□□ 0.37
NR1H3-220ENST00000481020 SOS1Q07889 1333 aaPredicted RBP17.39■□□□□ 0.37
NR1H3-220ENST00000481020 WDR33Q9C0J8 1336 aaKnown RBP17.39■□□□□ 0.37
NR1H3-220ENST00000481020 NEK4P51957 841 aa17.38■□□□□ 0.37
NR1H3-220ENST00000481020 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
NR1H3-220ENST00000481020 ESYT1Q9BSJ8 1104 aa17.38■□□□□ 0.37
NR1H3-220ENST00000481020 SALL3Q9BXA9 1300 aa17.38■□□□□ 0.37
NR1H3-220ENST00000481020 SETD1AO15047 1707 aaKnown RBP17.37■□□□□ 0.37
NR1H3-220ENST00000481020 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
NR1H3-220ENST00000481020 GTF2F1P35269 517 aaKnown RBP eCLIP17.37■□□□□ 0.37
NR1H3-220ENST00000481020 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
NR1H3-220ENST00000481020 STAP2Q9UGK3 403 aa17.37■□□□□ 0.37
NR1H3-220ENST00000481020 C3P01024 1663 aa17.37■□□□□ 0.37
NR1H3-220ENST00000481020 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
NR1H3-220ENST00000481020 TPM3P06753 285 aa17.36■□□□□ 0.37
NR1H3-220ENST00000481020 MYRIPQ8NFW9 859 aa17.35■□□□□ 0.37
NR1H3-220ENST00000481020 OTUD7AQ8TE49 926 aaPredicted RBP17.35■□□□□ 0.37
NR1H3-220ENST00000481020 FAM13BQ9NYF5 915 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms