RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 MTFR1LQ9H019 292 aa18.7■□□□□ 0.58
PTPN7-212ENST00000480836 HSP90AB2PQ58FF8 381 aa18.69■□□□□ 0.58
PTPN7-212ENST00000480836 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
PTPN7-212ENST00000480836 TMF1P82094 1093 aa18.67■□□□□ 0.58
PTPN7-212ENST00000480836 SYTL4Q96C24 671 aaPredicted RBP18.66■□□□□ 0.58
PTPN7-212ENST00000480836 PNPLA7Q6ZV29 1317 aa18.66■□□□□ 0.58
PTPN7-212ENST00000480836 DOT1LQ8TEK3 1739 aa18.63■□□□□ 0.57
PTPN7-212ENST00000480836 ARXQ96QS3 562 aa18.63■□□□□ 0.57
PTPN7-212ENST00000480836 EMILIN1Q9Y6C2 1016 aa18.63■□□□□ 0.57
PTPN7-212ENST00000480836 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
PTPN7-212ENST00000480836 SLC24A1O60721 1099 aa18.61■□□□□ 0.57
PTPN7-212ENST00000480836 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
PTPN7-212ENST00000480836 TUBGCP6Q96RT7 1819 aa18.6■□□□□ 0.57
PTPN7-212ENST00000480836 LY75O60449 1722 aa18.6■□□□□ 0.57
PTPN7-212ENST00000480836 INSRP06213 1382 aa18.6■□□□□ 0.57
PTPN7-212ENST00000480836 CYP27B1O15528 508 aa18.6■□□□□ 0.57
PTPN7-212ENST00000480836 COL23A1Q86Y22 540 aaPredicted RBP18.58■□□□□ 0.56
PTPN7-212ENST00000480836 NSD3Q9BZ95 1437 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 COL24A1Q17RW2 1714 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 SMIM5Q71RC9 77 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 TFCP2L1Q9NZI6 479 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 CCNL1Q9UK58 526 aaPredicted RBP18.57■□□□□ 0.56
PTPN7-212ENST00000480836 KIF20BQ96Q89 1820 aa18.57■□□□□ 0.56
PTPN7-212ENST00000480836 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
PTPN7-212ENST00000480836 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
PTPN7-212ENST00000480836 RAPGEF4Q8WZA2 1011 aa18.56■□□□□ 0.56
PTPN7-212ENST00000480836 FLT4P35916 1363 aa18.55■□□□□ 0.56
PTPN7-212ENST00000480836 QSER1Q2KHR3 1735 aa18.55■□□□□ 0.56
PTPN7-212ENST00000480836 ZNF784Q8NCA9 323 aaPredicted RBP18.55■□□□□ 0.56
PTPN7-212ENST00000480836 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
PTPN7-212ENST00000480836 SLC16A10Q8TF71 515 aa18.55■□□□□ 0.56
PTPN7-212ENST00000480836 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
PTPN7-212ENST00000480836 UTRNP46939 3433 aa18.54■□□□□ 0.56
PTPN7-212ENST00000480836 MAP3K5Q99683 1374 aa18.54■□□□□ 0.56
PTPN7-212ENST00000480836 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
PTPN7-212ENST00000480836 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
PTPN7-212ENST00000480836 MPRIPQ6WCQ1 1025 aa18.53■□□□□ 0.56
PTPN7-212ENST00000480836 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
PTPN7-212ENST00000480836 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
PTPN7-212ENST00000480836 KLHL34Q8N239 644 aa18.52■□□□□ 0.56
PTPN7-212ENST00000480836 EYA1Q99502 592 aa18.52■□□□□ 0.56
PTPN7-212ENST00000480836 POLKQ9UBT6 870 aa18.52■□□□□ 0.56
PTPN7-212ENST00000480836 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
PTPN7-212ENST00000480836 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
PTPN7-212ENST00000480836 WASHC2AQ641Q2 1341 aa18.5■□□□□ 0.55
PTPN7-212ENST00000480836 MSL1Q68DK7 614 aa18.5■□□□□ 0.55
PTPN7-212ENST00000480836 PIGBQ92521 554 aa18.5■□□□□ 0.55
PTPN7-212ENST00000480836 PCDH11XQ9BZA7 1347 aa18.49■□□□□ 0.55
PTPN7-212ENST00000480836 PCDH11YQ9BZA8 1340 aa18.49■□□□□ 0.55
PTPN7-212ENST00000480836 SMG6Q86US8 1419 aaKnown RBP18.49■□□□□ 0.55
PTPN7-212ENST00000480836 TIMELESSQ9UNS1 1208 aa18.49■□□□□ 0.55
PTPN7-212ENST00000480836 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
PTPN7-212ENST00000480836 TNNT2P45379 298 aaPredicted RBP18.48■□□□□ 0.55
PTPN7-212ENST00000480836 NKX1-1Q15270 411 aaPredicted RBP18.48■□□□□ 0.55
PTPN7-212ENST00000480836 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
PTPN7-212ENST00000480836 MAP2P11137 1827 aaKnown RBP18.48■□□□□ 0.55
PTPN7-212ENST00000480836 ITGB4P16144 1822 aa18.48■□□□□ 0.55
PTPN7-212ENST00000480836 MSH5O43196 834 aa18.47■□□□□ 0.55
PTPN7-212ENST00000480836 YBX3P16989 372 aaKnown RBP eCLIP18.47■□□□□ 0.553e-8■□□□□ 10.5
PTPN7-212ENST00000480836 POLD1P28340 1107 aa18.47■□□□□ 0.55
PTPN7-212ENST00000480836 GPR162Q16538 588 aa18.47■□□□□ 0.55
PTPN7-212ENST00000480836 PKD1L3Q7Z443 1732 aa18.46■□□□□ 0.55
PTPN7-212ENST00000480836 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
PTPN7-212ENST00000480836 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
PTPN7-212ENST00000480836 C5P01031 1676 aa18.45■□□□□ 0.54
PTPN7-212ENST00000480836 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
PTPN7-212ENST00000480836 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
PTPN7-212ENST00000480836 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
PTPN7-212ENST00000480836 CHD4Q14839 1912 aa18.44■□□□□ 0.54
PTPN7-212ENST00000480836 ITPK1Q13572 414 aa18.43■□□□□ 0.54
PTPN7-212ENST00000480836 PELP1Q8IZL8 1130 aaKnown RBP18.43■□□□□ 0.54
PTPN7-212ENST00000480836 LINC00116Q8NCU8 138 aa18.43■□□□□ 0.54
PTPN7-212ENST00000480836 PANK3Q9H999 370 aa18.43■□□□□ 0.54
PTPN7-212ENST00000480836 PHKG2P15735 406 aa18.42■□□□□ 0.54
PTPN7-212ENST00000480836 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
PTPN7-212ENST00000480836 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
PTPN7-212ENST00000480836 ATG3Q9NT62 314 aa18.4■□□□□ 0.54
PTPN7-212ENST00000480836 SPG7Q9UQ90 795 aa18.4■□□□□ 0.54
PTPN7-212ENST00000480836 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
PTPN7-212ENST00000480836 LOC102724428A0A0B4J2F2 783 aa18.39■□□□□ 0.53
PTPN7-212ENST00000480836 SIK1P57059 783 aa18.39■□□□□ 0.53
PTPN7-212ENST00000480836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.53
PTPN7-212ENST00000480836 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.38■□□□□ 0.53
PTPN7-212ENST00000480836 PHF14O94880 888 aa18.38■□□□□ 0.53
PTPN7-212ENST00000480836 SMARCC1Q92922 1105 aaPredicted RBP18.38■□□□□ 0.53
PTPN7-212ENST00000480836 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
PTPN7-212ENST00000480836 EIF4G2P78344 907 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPN7-212ENST00000480836 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
PTPN7-212ENST00000480836 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
PTPN7-212ENST00000480836 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
PTPN7-212ENST00000480836 TMOD3Q9NYL9 352 aa18.36■□□□□ 0.53
PTPN7-212ENST00000480836 WWC3Q9ULE0 1092 aa18.36■□□□□ 0.53
PTPN7-212ENST00000480836 AK7Q96M32 723 aa18.35■□□□□ 0.53
PTPN7-212ENST00000480836 ATP6V1AP38606 617 aa18.34■□□□□ 0.53
PTPN7-212ENST00000480836 C1QTNF8P60827 252 aa18.34■□□□□ 0.53
PTPN7-212ENST00000480836 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
PTPN7-212ENST00000480836 CD2APQ9Y5K6 639 aa18.34■□□□□ 0.53
PTPN7-212ENST00000480836 GOLGB1Q14789 3259 aaKnown RBP18.33■□□□□ 0.52
PTPN7-212ENST00000480836 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms