RNA–Protein interactions for RNA: ENST00000480594.1

SLC1A4-203, Transcript of solute carrier family 1 member 4, humanhuman

TSL 2

Gene SLC1A4, Length 5,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-203ENST00000480594 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 PTPN14Q15678 1187 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 TMCO3Q6UWJ1 677 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 AFAP1Q8N556 730 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 NUTM2GQ5VZR2 741 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
SLC1A4-203ENST00000480594 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 TNPO1Q92973 898 aaKnown RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 NSD3Q9BZ95 1437 aa12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 CASTP20810 708 aaKnown RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 SH2B1Q9NRF2 756 aaPredicted RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
SLC1A4-203ENST00000480594 ZSCAN12O43309 604 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 RAB11FIP3O75154 756 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 C20orf194Q5TEA3 1177 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 SYCP1Q15431 976 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 MX1P20591 662 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 SKIDA1Q1XH10 827 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 WASF1Q92558 559 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 GNL3LQ9NVN8 582 aaKnown RBP12.79□□□□□ -0.36
SLC1A4-203ENST00000480594 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 SIL1Q9H173 461 aa12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 NEMFO60524 1076 aa12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
SLC1A4-203ENST00000480594 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.36
SLC1A4-203ENST00000480594 RTEL1-TNFRSF6BF6WH68 1400 aa12.77□□□□□ -0.36
SLC1A4-203ENST00000480594 SSFA2P28290 1259 aa12.77□□□□□ -0.36
SLC1A4-203ENST00000480594 CCDC148Q8NFR7 591 aa12.77□□□□□ -0.36
SLC1A4-203ENST00000480594 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.36
SLC1A4-203ENST00000480594 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 CCDC141Q6ZP82 1450 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 CTAGE5O15320 804 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 ATF3P18847 181 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 CCDC57Q2TAC2 916 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 MTMR7Q9Y216 660 aa12.77□□□□□ -0.37
SLC1A4-203ENST00000480594 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 ZRSR2Q15696 482 aaKnown RBP12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 CEP131Q9UPN4 1083 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 CAMK4Q16566 473 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 MAP3K1Q13233 1512 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 CCDC83Q8IWF9 413 aa12.76□□□□□ -0.37
SLC1A4-203ENST00000480594 UVSSAQ2YD98 709 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 HSP90AB3PQ58FF7 597 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 MCM3P25205 808 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 CBX1P83916 185 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 ZNF530Q6P9A1 599 aaPredicted RBP12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 TBC1D32Q96NH3 1257 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 C11orf95C9JLR9 678 aaPredicted RBP12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 MEX3CQ5U5Q3 659 aaKnown RBP12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 TANGO6Q9C0B7 1094 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
SLC1A4-203ENST00000480594 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 EXOC6BQ9Y2D4 811 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 KLHL40Q2TBA0 621 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 BMP2KLQ5H9B9 411 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 CALCOCO1Q9P1Z2 691 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 MAP9Q49MG5 647 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 DDX19AQ9NUU7 478 aaKnown RBP12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 IMMTQ16891 758 aaKnown RBP12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 CRACR2AQ9BSW2 395 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
SLC1A4-203ENST00000480594 IKQ13123 557 aaPredicted RBP12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 KIAA1328Q86T90 577 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 FAM193AP78312 1265 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 PRIMPOLQ96LW4 560 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 GSDMDP57764 484 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 TXNDC2Q86VQ3 553 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 NUP133Q8WUM0 1156 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 TNNT1P13805 278 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 CASQ1P31415 396 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 PRPF40BQ6NWY9 871 aaKnown RBP12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 FERMT3Q86UX7 667 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 ANKRD18AQ8IVF6 992 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 USP25Q9UHP3 1055 aa12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
SLC1A4-203ENST00000480594 KIF5CO60282 957 aa12.72□□□□□ -0.37
SLC1A4-203ENST00000480594 SOGA3Q5TF21 947 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms