RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 MRPL50Q8N5N7 158 aaKnown RBP21.32■■□□□ 1
SH3D21-203ENST00000480549 ORAI2Q96SN7 254 aa21.32■■□□□ 1
SH3D21-203ENST00000480549 PSME1Q06323 249 aa21.32■■□□□ 1
SH3D21-203ENST00000480549 CRB1P82279 1406 aa21.32■■□□□ 1
SH3D21-203ENST00000480549 IPO8O15397 1037 aaKnown RBP21.32■■□□□ 1
SH3D21-203ENST00000480549 MTHFSDQ2M296 383 aaKnown RBP21.32■■□□□ 1
SH3D21-203ENST00000480549 MCM10Q7L590 875 aa21.32■■□□□ 1
SH3D21-203ENST00000480549 KIF1AQ12756 1690 aa21.31■■□□□ 1
SH3D21-203ENST00000480549 TWISTNBQ3B726 338 aaPredicted RBP21.31■■□□□ 1
SH3D21-203ENST00000480549 PROSER2Q86WR7 435 aaPredicted RBP21.31■■□□□ 1
SH3D21-203ENST00000480549 TMEM57Q8N5G2 664 aa21.31■■□□□ 1
SH3D21-203ENST00000480549 CHL1O00533 1208 aa21.3■■□□□ 1
SH3D21-203ENST00000480549 LRRC37A3O60309 1634 aa21.3■■□□□ 1
SH3D21-203ENST00000480549 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
SH3D21-203ENST00000480549 FOXO3O43524 673 aa21.3■■□□□ 1
SH3D21-203ENST00000480549 A0A0U1RQG5 324 aaPredicted RBP21.29■■□□□ 1
SH3D21-203ENST00000480549 ELL2O00472 640 aaPredicted RBP21.29■■□□□ 1
SH3D21-203ENST00000480549 HSP90AA2PQ14568 343 aaPredicted RBP21.29■■□□□ 1
SH3D21-203ENST00000480549 ITPRIPQ8IWB1 547 aa21.29■■□□□ 1
SH3D21-203ENST00000480549 SLIT3O75094 1523 aa21.28■■□□□ 1
SH3D21-203ENST00000480549 C1orf167Q5SNV9 1468 aa21.28■■□□□ 1
SH3D21-203ENST00000480549 RGS3P49796 1198 aa21.28■■□□□ 1
SH3D21-203ENST00000480549 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
SH3D21-203ENST00000480549 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
SH3D21-203ENST00000480549 IP6K1Q92551 441 aa21.26■□□□□ 0.99
SH3D21-203ENST00000480549 RGPD2P0DJD1 1756 aa21.25■□□□□ 0.99
SH3D21-203ENST00000480549 GAS2L2Q8NHY3 880 aa21.25■□□□□ 0.99
SH3D21-203ENST00000480549 C19orf44Q9H6X5 657 aa21.25■□□□□ 0.99
SH3D21-203ENST00000480549 KIAA0232Q92628 1395 aa21.25■□□□□ 0.99
SH3D21-203ENST00000480549 RWDD1Q9H446 243 aaPredicted RBP21.25■□□□□ 0.99
SH3D21-203ENST00000480549 ZBTB40Q9NUA8 1239 aa21.25■□□□□ 0.99
SH3D21-203ENST00000480549 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
SH3D21-203ENST00000480549 XPCQ01831 940 aaPredicted RBP21.24■□□□□ 0.99
SH3D21-203ENST00000480549 C8orf34Q49A92 452 aa21.24■□□□□ 0.99
SH3D21-203ENST00000480549 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
SH3D21-203ENST00000480549 KRT24Q2M2I5 525 aa21.23■□□□□ 0.99
SH3D21-203ENST00000480549 NAP1L5Q96NT1 182 aaPredicted RBP21.23■□□□□ 0.99
SH3D21-203ENST00000480549 ALS2Q96Q42 1657 aa21.23■□□□□ 0.99
SH3D21-203ENST00000480549 SLC4A3P48751 1232 aa21.23■□□□□ 0.99
SH3D21-203ENST00000480549 FAM161AQ3B820 660 aa21.22■□□□□ 0.99
SH3D21-203ENST00000480549 ABCC4O15439 1325 aa21.22■□□□□ 0.99
SH3D21-203ENST00000480549 MST1RQ04912 1400 aa21.22■□□□□ 0.99
SH3D21-203ENST00000480549 TMEM94Q12767 1356 aa21.21■□□□□ 0.99
SH3D21-203ENST00000480549 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
SH3D21-203ENST00000480549 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
SH3D21-203ENST00000480549 MSH6P52701 1360 aa21.21■□□□□ 0.99
SH3D21-203ENST00000480549 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
SH3D21-203ENST00000480549 RRAGDQ9NQL2 400 aaPredicted RBP21.21■□□□□ 0.99
SH3D21-203ENST00000480549 DCCP43146 1447 aa21.2■□□□□ 0.98
SH3D21-203ENST00000480549 USP19O94966 1318 aa21.2■□□□□ 0.98
SH3D21-203ENST00000480549 NCOA3Q9Y6Q9 1424 aa21.2■□□□□ 0.98
SH3D21-203ENST00000480549 PDZRN3Q9UPQ7 1066 aa21.19■□□□□ 0.98
SH3D21-203ENST00000480549 KRT28Q7Z3Y7 464 aa21.19■□□□□ 0.98
SH3D21-203ENST00000480549 USHBP1Q8N6Y0 703 aa21.19■□□□□ 0.98
SH3D21-203ENST00000480549 GCP02774 474 aa21.18■□□□□ 0.98
SH3D21-203ENST00000480549 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
SH3D21-203ENST00000480549 ZBTB7BO15156 539 aaPredicted RBP21.18■□□□□ 0.98
SH3D21-203ENST00000480549 NBPF6Q5VWK0 638 aa21.18■□□□□ 0.98
SH3D21-203ENST00000480549 NBPF4Q96M43 638 aa21.18■□□□□ 0.98
SH3D21-203ENST00000480549 XIRP1Q702N8 1843 aaKnown RBP21.17■□□□□ 0.98
SH3D21-203ENST00000480549 MAP3K5Q99683 1374 aa21.17■□□□□ 0.98
SH3D21-203ENST00000480549 GNAT3A8MTJ3 354 aa21.17■□□□□ 0.98
SH3D21-203ENST00000480549 ARHGEF25Q86VW2 580 aa21.17■□□□□ 0.98
SH3D21-203ENST00000480549 HSPA2P54652 639 aa21.17■□□□□ 0.98
SH3D21-203ENST00000480549 CAMTA1Q9Y6Y1 1673 aa21.17■□□□□ 0.98
SH3D21-203ENST00000480549 RGS12O14924 1447 aa21.16■□□□□ 0.98
SH3D21-203ENST00000480549 HSP90AA1P07900 732 aaKnown RBP21.16■□□□□ 0.98
SH3D21-203ENST00000480549 HAP1P54257 671 aaPredicted RBP21.16■□□□□ 0.98
SH3D21-203ENST00000480549 API5Q9BZZ5 524 aaKnown RBP21.16■□□□□ 0.98
SH3D21-203ENST00000480549 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
SH3D21-203ENST00000480549 MED1Q15648 1581 aaPredicted RBP21.15■□□□□ 0.98
SH3D21-203ENST00000480549 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
SH3D21-203ENST00000480549 STRCQ7RTU9 1775 aa21.14■□□□□ 0.98
SH3D21-203ENST00000480549 RGPD5Q99666 1765 aa21.14■□□□□ 0.98
SH3D21-203ENST00000480549 ATF3P18847 181 aa21.14■□□□□ 0.97
SH3D21-203ENST00000480549 IL17REQ8NFR9 667 aa21.14■□□□□ 0.97
SH3D21-203ENST00000480549 ZBTB7CA1YPR0 619 aa21.13■□□□□ 0.97
SH3D21-203ENST00000480549 LMO7Q8WWI1 1683 aa21.13■□□□□ 0.97
SH3D21-203ENST00000480549 RRP9O43818 475 aaKnown RBP21.13■□□□□ 0.97
SH3D21-203ENST00000480549 SMC5Q8IY18 1101 aa21.13■□□□□ 0.97
SH3D21-203ENST00000480549 FAM208AQ9UK61 1670 aaKnown RBP21.12■□□□□ 0.97
SH3D21-203ENST00000480549 LMTK3Q96Q04 1460 aa21.12■□□□□ 0.97
SH3D21-203ENST00000480549 LMOD2Q6P5Q4 547 aa21.12■□□□□ 0.97
SH3D21-203ENST00000480549 LRRC59Q96AG4 307 aaKnown RBP21.11■□□□□ 0.97
SH3D21-203ENST00000480549 DDRGK1Q96HY6 314 aa21.11■□□□□ 0.97
SH3D21-203ENST00000480549 RBM10P98175 930 aaKnown RBP21.11■□□□□ 0.97
SH3D21-203ENST00000480549 FRAT2O75474 233 aaPredicted RBP21.11■□□□□ 0.97
SH3D21-203ENST00000480549 CHMP4BQ9H444 224 aaKnown RBP21.11■□□□□ 0.97
SH3D21-203ENST00000480549 CEMIPQ8WUJ3 1361 aa21.09■□□□□ 0.97
SH3D21-203ENST00000480549 PTPRCP08575 1304 aa21.09■□□□□ 0.97
SH3D21-203ENST00000480549 INTS3Q68E01 1043 aaKnown RBP21.09■□□□□ 0.97
SH3D21-203ENST00000480549 CRYBG1Q9Y4K1 1723 aa21.08■□□□□ 0.97
SH3D21-203ENST00000480549 KDM4FA0A1W2PPD8 638 aa21.08■□□□□ 0.96
SH3D21-203ENST00000480549 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.96
SH3D21-203ENST00000480549 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.96
SH3D21-203ENST00000480549 AXIN2Q9Y2T1 843 aa21.08■□□□□ 0.96
SH3D21-203ENST00000480549 C1orf115Q9H7X2 142 aa21.07■□□□□ 0.96
SH3D21-203ENST00000480549 KDM3BQ7LBC6 1761 aa21.07■□□□□ 0.96
SH3D21-203ENST00000480549 CADPS2Q86UW7 1296 aa21.07■□□□□ 0.96
SH3D21-203ENST00000480549 ANKRD24Q8TF21 1146 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms