RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
VCP-206ENST00000480327 IP6K1Q92551 441 aa12.51□□□□□ -0.41
VCP-206ENST00000480327 NSD2O96028 1365 aa12.51□□□□□ -0.41
VCP-206ENST00000480327 MEGF6O75095 1541 aa12.51□□□□□ -0.41
VCP-206ENST00000480327 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
VCP-206ENST00000480327 AKT1S1Q96B36 256 aa12.5□□□□□ -0.41
VCP-206ENST00000480327 TERF2IPQ9NYB0 399 aa12.5□□□□□ -0.41
VCP-206ENST00000480327 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
VCP-206ENST00000480327 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
VCP-206ENST00000480327 ITGB4P16144 1822 aa12.48□□□□□ -0.41
VCP-206ENST00000480327 TOGARAM1Q9Y4F4 1720 aa12.48□□□□□ -0.41
VCP-206ENST00000480327 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
VCP-206ENST00000480327 KCNQ4P56696 695 aa12.48□□□□□ -0.41
VCP-206ENST00000480327 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
VCP-206ENST00000480327 C5P01031 1676 aa12.48□□□□□ -0.41
VCP-206ENST00000480327 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
VCP-206ENST00000480327 PNPLA7Q6ZV29 1317 aa12.47□□□□□ -0.41
VCP-206ENST00000480327 HOXC9P31274 260 aa12.47□□□□□ -0.41
VCP-206ENST00000480327 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
VCP-206ENST00000480327 ARXQ96QS3 562 aa12.47□□□□□ -0.41
VCP-206ENST00000480327 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
VCP-206ENST00000480327 CARD14Q9BXL6 1004 aa12.46□□□□□ -0.41
VCP-206ENST00000480327 PANK3Q9H999 370 aa12.46□□□□□ -0.41
VCP-206ENST00000480327 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
VCP-206ENST00000480327 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
VCP-206ENST00000480327 PKD1L3Q7Z443 1732 aa12.45□□□□□ -0.42
VCP-206ENST00000480327 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
VCP-206ENST00000480327 NSD3Q9BZ95 1437 aa12.44□□□□□ -0.42
VCP-206ENST00000480327 RRS1Q15050 365 aaKnown RBP12.43□□□□□ -0.42
VCP-206ENST00000480327 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
VCP-206ENST00000480327 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
VCP-206ENST00000480327 COG3Q96JB2 828 aa12.43□□□□□ -0.42
VCP-206ENST00000480327 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
VCP-206ENST00000480327 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
VCP-206ENST00000480327 RTL1A6NKG5 1358 aa12.43□□□□□ -0.42
VCP-206ENST00000480327 FYB1O15117 783 aa12.42□□□□□ -0.42
VCP-206ENST00000480327 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
VCP-206ENST00000480327 USHBP1Q8N6Y0 703 aa12.42□□□□□ -0.42
VCP-206ENST00000480327 ZCRB1Q8TBF4 217 aaKnown RBP12.42□□□□□ -0.42
VCP-206ENST00000480327 UBR3Q6ZT12 1888 aa12.42□□□□□ -0.42
VCP-206ENST00000480327 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
VCP-206ENST00000480327 AMPHP49418 695 aa12.41□□□□□ -0.42
VCP-206ENST00000480327 NLGN2Q8NFZ4 835 aa12.41□□□□□ -0.42
VCP-206ENST00000480327 SLC16A10Q8TF71 515 aa12.41□□□□□ -0.42
VCP-206ENST00000480327 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
VCP-206ENST00000480327 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
VCP-206ENST00000480327 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
VCP-206ENST00000480327 DDX10Q13206 875 aaKnown RBP12.39□□□□□ -0.43
VCP-206ENST00000480327 HSP90AB2PQ58FF8 381 aa12.39□□□□□ -0.43
VCP-206ENST00000480327 COL23A1Q86Y22 540 aaPredicted RBP12.39□□□□□ -0.43
VCP-206ENST00000480327 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
VCP-206ENST00000480327 NCAPD2Q15021 1401 aa12.38□□□□□ -0.43
VCP-206ENST00000480327 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
VCP-206ENST00000480327 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
VCP-206ENST00000480327 INSRP06213 1382 aa12.38□□□□□ -0.43
VCP-206ENST00000480327 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
VCP-206ENST00000480327 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
VCP-206ENST00000480327 CYP27B1O15528 508 aa12.36□□□□□ -0.43
VCP-206ENST00000480327 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
VCP-206ENST00000480327 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
VCP-206ENST00000480327 FLT4P35916 1363 aa12.35□□□□□ -0.43
VCP-206ENST00000480327 PER1O15534 1290 aaPredicted RBP12.35□□□□□ -0.43
VCP-206ENST00000480327 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
VCP-206ENST00000480327 POLD1P28340 1107 aa12.35□□□□□ -0.43
VCP-206ENST00000480327 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
VCP-206ENST00000480327 GPR162Q16538 588 aa12.35□□□□□ -0.43
VCP-206ENST00000480327 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
VCP-206ENST00000480327 KIF24Q5T7B8 1368 aa12.34□□□□□ -0.43
VCP-206ENST00000480327 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
VCP-206ENST00000480327 EMILIN1Q9Y6C2 1016 aa12.34□□□□□ -0.43
VCP-206ENST00000480327 SMG6Q86US8 1419 aaKnown RBP12.34□□□□□ -0.43
VCP-206ENST00000480327 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
VCP-206ENST00000480327 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 TATP17735 454 aaPredicted RBP12.33□□□□□ -0.44
VCP-206ENST00000480327 C1QTNF8P60827 252 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 AMER1Q5JTC6 1135 aaPredicted RBP12.33□□□□□ -0.44
VCP-206ENST00000480327 SMIM5Q71RC9 77 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 MORC1Q86VD1 984 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 RAPGEF4Q8WZA2 1011 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
VCP-206ENST00000480327 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
VCP-206ENST00000480327 MPRIPQ6WCQ1 1025 aa12.31□□□□□ -0.44
VCP-206ENST00000480327 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
VCP-206ENST00000480327 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
VCP-206ENST00000480327 MSH5O43196 834 aa12.3□□□□□ -0.44
VCP-206ENST00000480327 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
VCP-206ENST00000480327 SENP3-EIF4A1A0A087X0R7 540 aa12.29□□□□□ -0.44
VCP-206ENST00000480327 PPM1GO15355 546 aaPredicted RBP12.29□□□□□ -0.44
VCP-206ENST00000480327 PIGBQ92521 554 aa12.29□□□□□ -0.44
VCP-206ENST00000480327 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
VCP-206ENST00000480327 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
VCP-206ENST00000480327 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
VCP-206ENST00000480327 EYA1Q99502 592 aa12.28□□□□□ -0.44
VCP-206ENST00000480327 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.44
VCP-206ENST00000480327 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
VCP-206ENST00000480327 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
VCP-206ENST00000480327 VIRMAQ69YN4 1812 aaKnown RBP12.27□□□□□ -0.45
VCP-206ENST00000480327 ADCY9O60503 1353 aa12.27□□□□□ -0.45
VCP-206ENST00000480327 ITPK1Q13572 414 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms