RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 NHSQ6T4R5 1651 aa20.68■□□□□ 0.9
PRKN-207ENST00000479615 EMILIN1Q9Y6C2 1016 aa20.68■□□□□ 0.9
PRKN-207ENST00000479615 PPM1GO15355 546 aaPredicted RBP20.67■□□□□ 0.9
PRKN-207ENST00000479615 SLC27A3Q5K4L6 730 aa20.67■□□□□ 0.9
PRKN-207ENST00000479615 SLC15A2Q16348 729 aa20.66■□□□□ 0.9
PRKN-207ENST00000479615 POLKQ9UBT6 870 aa20.66■□□□□ 0.9
PRKN-207ENST00000479615 MEGF6O75095 1541 aa20.65■□□□□ 0.9
PRKN-207ENST00000479615 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
PRKN-207ENST00000479615 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
PRKN-207ENST00000479615 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
PRKN-207ENST00000479615 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
PRKN-207ENST00000479615 USHBP1Q8N6Y0 703 aa20.64■□□□□ 0.89
PRKN-207ENST00000479615 KNSTRNQ9Y448 316 aa20.64■□□□□ 0.89
PRKN-207ENST00000479615 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
PRKN-207ENST00000479615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.62■□□□□ 0.89
PRKN-207ENST00000479615 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
PRKN-207ENST00000479615 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
PRKN-207ENST00000479615 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
PRKN-207ENST00000479615 MORC1Q86VD1 984 aa20.6■□□□□ 0.89
PRKN-207ENST00000479615 PPP1R1BQ9UD71 204 aaPredicted RBP20.6■□□□□ 0.89
PRKN-207ENST00000479615 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.89
PRKN-207ENST00000479615 EYA1Q99502 592 aa20.58■□□□□ 0.89
PRKN-207ENST00000479615 ANKRD26Q9UPS8 1709 aa20.57■□□□□ 0.88
PRKN-207ENST00000479615 BTAF1O14981 1849 aa20.57■□□□□ 0.88
PRKN-207ENST00000479615 RGPD2P0DJD1 1756 aa20.57■□□□□ 0.88
PRKN-207ENST00000479615 NKX1-1Q15270 411 aaPredicted RBP20.56■□□□□ 0.88
PRKN-207ENST00000479615 MTFR1LQ9H019 292 aa20.56■□□□□ 0.88
PRKN-207ENST00000479615 KIF7Q2M1P5 1343 aa20.55■□□□□ 0.88
PRKN-207ENST00000479615 KAT6BQ8WYB5 2073 aa20.55■□□□□ 0.88
PRKN-207ENST00000479615 CYP27B1O15528 508 aa20.55■□□□□ 0.88
PRKN-207ENST00000479615 EIF4A2Q14240 407 aaKnown RBP20.55■□□□□ 0.88
PRKN-207ENST00000479615 LRRC4BQ9NT99 713 aa20.55■□□□□ 0.88
PRKN-207ENST00000479615 SLC16A10Q8TF71 515 aa20.54■□□□□ 0.88
PRKN-207ENST00000479615 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
PRKN-207ENST00000479615 SMARCC1Q92922 1105 aaPredicted RBP20.53■□□□□ 0.88
PRKN-207ENST00000479615 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
PRKN-207ENST00000479615 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
PRKN-207ENST00000479615 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
PRKN-207ENST00000479615 IFNL2Q8IZJ0 200 aa20.52■□□□□ 0.88
PRKN-207ENST00000479615 CCNL1Q9UK58 526 aaPredicted RBP20.52■□□□□ 0.88
PRKN-207ENST00000479615 IGSF1Q8N6C5 1336 aa20.52■□□□□ 0.87
PRKN-207ENST00000479615 SHANK3Q9BYB0 1731 aa20.51■□□□□ 0.87
PRKN-207ENST00000479615 AMER1Q5JTC6 1135 aaPredicted RBP20.51■□□□□ 0.87
PRKN-207ENST00000479615 CASZ1Q86V15 1759 aa20.5■□□□□ 0.87
PRKN-207ENST00000479615 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
PRKN-207ENST00000479615 PDGFDQ9GZP0 370 aaPredicted RBP20.5■□□□□ 0.87
PRKN-207ENST00000479615 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
PRKN-207ENST00000479615 PAPPAQ13219 1627 aa20.49■□□□□ 0.87
PRKN-207ENST00000479615 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
PRKN-207ENST00000479615 PTGER2P43116 358 aa20.49■□□□□ 0.87
PRKN-207ENST00000479615 ZNF827Q17R98 1081 aa20.49■□□□□ 0.87
PRKN-207ENST00000479615 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
PRKN-207ENST00000479615 DOT1LQ8TEK3 1739 aa20.49■□□□□ 0.87
PRKN-207ENST00000479615 PLEKHO1Q53GL0 409 aaPredicted RBP20.48■□□□□ 0.87
PRKN-207ENST00000479615 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
PRKN-207ENST00000479615 PER1O15534 1290 aaPredicted RBP20.47■□□□□ 0.87
PRKN-207ENST00000479615 PHKG2P15735 406 aa20.47■□□□□ 0.87
PRKN-207ENST00000479615 PKD1L3Q7Z443 1732 aa20.47■□□□□ 0.87
PRKN-207ENST00000479615 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
PRKN-207ENST00000479615 FLAD1Q8NFF5 587 aa20.45■□□□□ 0.86
PRKN-207ENST00000479615 SGIP1Q9BQI5 828 aa20.45■□□□□ 0.86
PRKN-207ENST00000479615 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
PRKN-207ENST00000479615 NPC1L1Q9UHC9 1359 aa20.45■□□□□ 0.86
PRKN-207ENST00000479615 PIGBQ92521 554 aa20.44■□□□□ 0.86
PRKN-207ENST00000479615 LY75O60449 1722 aa20.44■□□□□ 0.86
PRKN-207ENST00000479615 ERVV-2B6SEH9 535 aa20.43■□□□□ 0.86
PRKN-207ENST00000479615 POLD1P28340 1107 aa20.43■□□□□ 0.86
PRKN-207ENST00000479615 DCAF5Q96JK2 942 aa20.43■□□□□ 0.86
PRKN-207ENST00000479615 ARXQ96QS3 562 aa20.43■□□□□ 0.86
PRKN-207ENST00000479615 PNPLA7Q6ZV29 1317 aa20.43■□□□□ 0.86
PRKN-207ENST00000479615 IL13P35225 146 aa20.41■□□□□ 0.86
PRKN-207ENST00000479615 KCNQ4P56696 695 aa20.41■□□□□ 0.86
PRKN-207ENST00000479615 KDRP35968 1356 aa20.4■□□□□ 0.86
PRKN-207ENST00000479615 MTHFSP49914 203 aa20.4■□□□□ 0.86
PRKN-207ENST00000479615 SULT6B1Q6IMI4 303 aa20.4■□□□□ 0.86
PRKN-207ENST00000479615 C1orf141Q5JVX7 400 aa20.39■□□□□ 0.85
PRKN-207ENST00000479615 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
PRKN-207ENST00000479615 QSER1Q2KHR3 1735 aa20.39■□□□□ 0.85
PRKN-207ENST00000479615 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
PRKN-207ENST00000479615 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
PRKN-207ENST00000479615 LOC102724428A0A0B4J2F2 783 aa20.37■□□□□ 0.85
PRKN-207ENST00000479615 SIK1P57059 783 aa20.37■□□□□ 0.85
PRKN-207ENST00000479615 CC2D1BQ5T0F9 858 aaKnown RBP20.37■□□□□ 0.85
PRKN-207ENST00000479615 FHDC1Q9C0D6 1143 aaPredicted RBP20.37■□□□□ 0.85
PRKN-207ENST00000479615 MSH5O43196 834 aa20.36■□□□□ 0.85
PRKN-207ENST00000479615 AK7Q96M32 723 aa20.36■□□□□ 0.85
PRKN-207ENST00000479615 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
PRKN-207ENST00000479615 COL23A1Q86Y22 540 aaPredicted RBP20.35■□□□□ 0.85
PRKN-207ENST00000479615 CABP4P57796 275 aa20.34■□□□□ 0.85
PRKN-207ENST00000479615 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
PRKN-207ENST00000479615 ATG3Q9NT62 314 aa20.34■□□□□ 0.85
PRKN-207ENST00000479615 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
PRKN-207ENST00000479615 TOGARAM1Q9Y4F4 1720 aa20.33■□□□□ 0.85
PRKN-207ENST00000479615 ATP6V1AP38606 617 aa20.33■□□□□ 0.85
PRKN-207ENST00000479615 ITGB4P16144 1822 aa20.32■□□□□ 0.84
PRKN-207ENST00000479615 SSFA2P28290 1259 aa20.32■□□□□ 0.84
PRKN-207ENST00000479615 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
PRKN-207ENST00000479615 C5P01031 1676 aa20.3■□□□□ 0.84
PRKN-207ENST00000479615 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
PRKN-207ENST00000479615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms