RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 DEFB132Q7Z7B7 95 aa28.19■■■□□ 2.1
COL19A1-203ENST00000478620 SPG7Q9UQ90 795 aa28.19■■■□□ 2.1
COL19A1-203ENST00000478620 ACSBG1Q96GR2 724 aa28.17■■■□□ 2.1
COL19A1-203ENST00000478620 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
COL19A1-203ENST00000478620 RALBP1Q15311 655 aa28.16■■■□□ 2.1
COL19A1-203ENST00000478620 BCL11BQ9C0K0 894 aaPredicted RBP28.15■■■□□ 2.1
COL19A1-203ENST00000478620 EN1Q05925 392 aaPredicted RBP28.14■■■□□ 2.1
COL19A1-203ENST00000478620 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.1
COL19A1-203ENST00000478620 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
COL19A1-203ENST00000478620 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
COL19A1-203ENST00000478620 NCAPD2Q15021 1401 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 HMOX1P09601 288 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 PLEKHO1Q53GL0 409 aaPredicted RBP28.13■■■□□ 2.09
COL19A1-203ENST00000478620 NUDCQ9Y266 331 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 PARD3Q8TEW0 1356 aa28.12■■■□□ 2.09
COL19A1-203ENST00000478620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.12■■■□□ 2.09
COL19A1-203ENST00000478620 BCL9O00512 1426 aa28.11■■■□□ 2.09
COL19A1-203ENST00000478620 SYTL4Q96C24 671 aaPredicted RBP28.11■■■□□ 2.09
COL19A1-203ENST00000478620 EP400Q96L91 3159 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 RGPD1P0DJD0 1748 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 KCNQ2O43526 872 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 KAT6BQ8WYB5 2073 aa28.09■■■□□ 2.09
COL19A1-203ENST00000478620 PTF1AQ7RTS3 328 aa28.09■■■□□ 2.09
COL19A1-203ENST00000478620 CYP27B1O15528 508 aa28.08■■■□□ 2.09
COL19A1-203ENST00000478620 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
COL19A1-203ENST00000478620 IFNL2Q8IZJ0 200 aa28.07■■■□□ 2.08
COL19A1-203ENST00000478620 PRIM1P49642 420 aaKnown RBP28.06■■■□□ 2.08
COL19A1-203ENST00000478620 EZH2Q15910 746 aaKnown RBP28.06■■■□□ 2.08
COL19A1-203ENST00000478620 U2AF1L5P0DN76 240 aaPredicted RBP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 U2AF1Q01081 240 aaKnown RBP eCLIP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 ZNF530Q6P9A1 599 aaPredicted RBP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 CAMKK2Q96RR4 588 aa28.03■■■□□ 2.08
COL19A1-203ENST00000478620 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
COL19A1-203ENST00000478620 KDRP35968 1356 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
COL19A1-203ENST00000478620 PHKG2P15735 406 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 C1orf141Q5JVX7 400 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 SBF2Q86WG5 1849 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 PLSCR1O15162 318 aa28.01■■■□□ 2.07
COL19A1-203ENST00000478620 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
COL19A1-203ENST00000478620 TNS1Q9HBL0 1735 aaKnown RBP28■■■□□ 2.07
COL19A1-203ENST00000478620 PLEKHG2Q9H7P9 1386 aa27.99■■■□□ 2.07
COL19A1-203ENST00000478620 HSP90AB1P08238 724 aaKnown RBP27.99■■■□□ 2.07
COL19A1-203ENST00000478620 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
COL19A1-203ENST00000478620 SHANK3Q9BYB0 1731 aa27.98■■■□□ 2.07
COL19A1-203ENST00000478620 MPRIPQ6WCQ1 1025 aa27.98■■■□□ 2.07
COL19A1-203ENST00000478620 PKD1L3Q7Z443 1732 aa27.97■■■□□ 2.07
COL19A1-203ENST00000478620 PRKAR2BP31323 418 aa27.94■■■□□ 2.06
COL19A1-203ENST00000478620 NHSQ6T4R5 1651 aa27.94■■■□□ 2.06
COL19A1-203ENST00000478620 FCHSD2O94868 740 aa27.93■■■□□ 2.06
COL19A1-203ENST00000478620 DCAF5Q96JK2 942 aa27.93■■■□□ 2.06
COL19A1-203ENST00000478620 ANP32CO43423 234 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 MTHFSDQ2M296 383 aaKnown RBP27.92■■■□□ 2.06
COL19A1-203ENST00000478620 AKAP4Q5JQC9 854 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 TMOD3Q9NYL9 352 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 NEFMP07197 916 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 TXNRD1Q16881 649 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 NBPF14Q5TI25 921 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 DOT1LQ8TEK3 1739 aa27.89■■■□□ 2.06
COL19A1-203ENST00000478620 GAS2L2Q8NHY3 880 aa27.89■■■□□ 2.06
COL19A1-203ENST00000478620 ERVV-2B6SEH9 535 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 CABP4P57796 275 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PROM2Q8N271 834 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PIGBQ92521 554 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PNNQ9H307 717 aaKnown RBP27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
COL19A1-203ENST00000478620 BTAF1O14981 1849 aa27.86■■■□□ 2.05
COL19A1-203ENST00000478620 SMARCC1Q92922 1105 aaPredicted RBP27.85■■■□□ 2.05
COL19A1-203ENST00000478620 WDR43Q15061 677 aaKnown RBP eCLIP27.84■■■□□ 2.05
COL19A1-203ENST00000478620 PSDA5PKW4 1024 aaPredicted RBP27.82■■■□□ 2.04
COL19A1-203ENST00000478620 GNAT3A8MTJ3 354 aa27.82■■■□□ 2.04
COL19A1-203ENST00000478620 LGR6Q9HBX8 967 aa27.82■■■□□ 2.04
COL19A1-203ENST00000478620 RNMTO43148 476 aaKnown RBP27.81■■■□□ 2.04
COL19A1-203ENST00000478620 R3HDM1Q15032 1099 aaKnown RBP27.81■■■□□ 2.04
COL19A1-203ENST00000478620 SLC27A3Q5K4L6 730 aa27.81■■■□□ 2.04
COL19A1-203ENST00000478620 NFATC2IPQ8NCF5 419 aa27.81■■■□□ 2.04
COL19A1-203ENST00000478620 CCNL1Q9UK58 526 aaPredicted RBP27.8■■■□□ 2.04
COL19A1-203ENST00000478620 KDM6AO15550 1401 aaPredicted RBP27.79■■■□□ 2.04
COL19A1-203ENST00000478620 MAPK8IP3Q9UPT6 1336 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 KCNQ4P56696 695 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 STK32BQ9NY57 414 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 ASAP1Q9ULH1 1129 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
COL19A1-203ENST00000478620 TOGARAM1Q9Y4F4 1720 aa27.78■■■□□ 2.04
COL19A1-203ENST00000478620 MAP3K5Q99683 1374 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 ITGB4P16144 1822 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RTF1Q92541 710 aaKnown RBP27.77■■■□□ 2.04
COL19A1-203ENST00000478620 LRRC4BQ9NT99 713 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RGPD3A6NKT7 1758 aaPredicted RBP27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RGPD4Q7Z3J3 1758 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
COL19A1-203ENST00000478620 SLC52A2Q9HAB3 445 aa27.75■■■□□ 2.03
COL19A1-203ENST00000478620 RREB1Q92766 1687 aa27.75■■■□□ 2.03
COL19A1-203ENST00000478620 HMGB2P26583 209 aaKnown RBP27.74■■■□□ 2.03
COL19A1-203ENST00000478620 TEFQ10587 303 aa27.74■■■□□ 2.03
COL19A1-203ENST00000478620 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
COL19A1-203ENST00000478620 RBM42Q9BTD8 480 aaKnown RBP27.73■■■□□ 2.03
COL19A1-203ENST00000478620 NUP188Q5SRE5 1749 aa27.72■■■□□ 2.03
COL19A1-203ENST00000478620 IL17REQ8NFR9 667 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms