RNA–Protein interactions for RNA: ENST00000478620.2

COL19A1-203, Transcript of collagen type XIX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL19A1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-203ENST00000478620 DEFB132Q7Z7B7 95 aa28.19■■■□□ 2.1
COL19A1-203ENST00000478620 SPG7Q9UQ90 795 aa28.19■■■□□ 2.1
COL19A1-203ENST00000478620 ACSBG1Q96GR2 724 aa28.17■■■□□ 2.1
COL19A1-203ENST00000478620 U2SURPO15042 1029 aaKnown RBP28.16■■■□□ 2.1
COL19A1-203ENST00000478620 RALBP1Q15311 655 aa28.16■■■□□ 2.1
COL19A1-203ENST00000478620 BCL11BQ9C0K0 894 aaPredicted RBP28.15■■■□□ 2.1
COL19A1-203ENST00000478620 EN1Q05925 392 aaPredicted RBP28.14■■■□□ 2.1
COL19A1-203ENST00000478620 AEBP1Q8IUX7 1158 aa28.14■■■□□ 2.1
COL19A1-203ENST00000478620 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
COL19A1-203ENST00000478620 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
COL19A1-203ENST00000478620 NCAPD2Q15021 1401 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 HMOX1P09601 288 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 PLEKHO1Q53GL0 409 aaPredicted RBP28.13■■■□□ 2.09
COL19A1-203ENST00000478620 NUDCQ9Y266 331 aa28.13■■■□□ 2.09
COL19A1-203ENST00000478620 PARD3Q8TEW0 1356 aa28.12■■■□□ 2.09
COL19A1-203ENST00000478620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.12■■■□□ 2.09
COL19A1-203ENST00000478620 BCL9O00512 1426 aa28.11■■■□□ 2.09
COL19A1-203ENST00000478620 SYTL4Q96C24 671 aaPredicted RBP28.11■■■□□ 2.09
COL19A1-203ENST00000478620 EP400Q96L91 3159 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 RGPD1P0DJD0 1748 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 KCNQ2O43526 872 aa28.1■■■□□ 2.09
COL19A1-203ENST00000478620 KAT6BQ8WYB5 2073 aa28.09■■■□□ 2.09
COL19A1-203ENST00000478620 PTF1AQ7RTS3 328 aa28.09■■■□□ 2.09
COL19A1-203ENST00000478620 CYP27B1O15528 508 aa28.08■■■□□ 2.09
COL19A1-203ENST00000478620 AMOTQ4VCS5 1084 aa28.08■■■□□ 2.09
COL19A1-203ENST00000478620 IFNL2Q8IZJ0 200 aa28.07■■■□□ 2.08
COL19A1-203ENST00000478620 PRIM1P49642 420 aaKnown RBP28.06■■■□□ 2.08
COL19A1-203ENST00000478620 EZH2Q15910 746 aaKnown RBP28.06■■■□□ 2.08
COL19A1-203ENST00000478620 U2AF1L5P0DN76 240 aaPredicted RBP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 U2AF1Q01081 240 aaKnown RBP eCLIP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 ZNF530Q6P9A1 599 aaPredicted RBP28.04■■■□□ 2.08
COL19A1-203ENST00000478620 CAMKK2Q96RR4 588 aa28.03■■■□□ 2.08
COL19A1-203ENST00000478620 COL3A1P02461 1466 aaPredicted RBP28.02■■■□□ 2.08
COL19A1-203ENST00000478620 KDRP35968 1356 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
COL19A1-203ENST00000478620 PHKG2P15735 406 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 C1orf141Q5JVX7 400 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 SBF2Q86WG5 1849 aa28.02■■■□□ 2.08
COL19A1-203ENST00000478620 PLSCR1O15162 318 aa28.01■■■□□ 2.07
COL19A1-203ENST00000478620 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
COL19A1-203ENST00000478620 TNS1Q9HBL0 1735 aaKnown RBP28■■■□□ 2.07
COL19A1-203ENST00000478620 PLEKHG2Q9H7P9 1386 aa27.99■■■□□ 2.07
COL19A1-203ENST00000478620 HSP90AB1P08238 724 aaKnown RBP27.99■■■□□ 2.07
COL19A1-203ENST00000478620 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
COL19A1-203ENST00000478620 SHANK3Q9BYB0 1731 aa27.98■■■□□ 2.07
COL19A1-203ENST00000478620 MPRIPQ6WCQ1 1025 aa27.98■■■□□ 2.07
COL19A1-203ENST00000478620 PKD1L3Q7Z443 1732 aa27.97■■■□□ 2.07
COL19A1-203ENST00000478620 PRKAR2BP31323 418 aa27.94■■■□□ 2.06
COL19A1-203ENST00000478620 NHSQ6T4R5 1651 aa27.94■■■□□ 2.06
COL19A1-203ENST00000478620 FCHSD2O94868 740 aa27.93■■■□□ 2.06
COL19A1-203ENST00000478620 DCAF5Q96JK2 942 aa27.93■■■□□ 2.06
COL19A1-203ENST00000478620 ANP32CO43423 234 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 MTHFSDQ2M296 383 aaKnown RBP27.92■■■□□ 2.06
COL19A1-203ENST00000478620 AKAP4Q5JQC9 854 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 TMOD3Q9NYL9 352 aa27.92■■■□□ 2.06
COL19A1-203ENST00000478620 NEFMP07197 916 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 TXNRD1Q16881 649 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 NBPF14Q5TI25 921 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 RSPH6AQ9H0K4 717 aa27.91■■■□□ 2.06
COL19A1-203ENST00000478620 DOT1LQ8TEK3 1739 aa27.89■■■□□ 2.06
COL19A1-203ENST00000478620 GAS2L2Q8NHY3 880 aa27.89■■■□□ 2.06
COL19A1-203ENST00000478620 ERVV-2B6SEH9 535 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 CABP4P57796 275 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PROM2Q8N271 834 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PIGBQ92521 554 aa27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PNNQ9H307 717 aaKnown RBP27.88■■■□□ 2.05
COL19A1-203ENST00000478620 PHACTR3Q96KR7 559 aa27.87■■■□□ 2.05
COL19A1-203ENST00000478620 BTAF1O14981 1849 aa27.86■■■□□ 2.05
COL19A1-203ENST00000478620 SMARCC1Q92922 1105 aaPredicted RBP27.85■■■□□ 2.05
COL19A1-203ENST00000478620 WDR43Q15061 677 aaKnown RBP eCLIP27.84■■■□□ 2.05
COL19A1-203ENST00000478620 PSDA5PKW4 1024 aaPredicted RBP27.82■■■□□ 2.04
COL19A1-203ENST00000478620 GNAT3A8MTJ3 354 aa27.82■■■□□ 2.04
COL19A1-203ENST00000478620 LGR6Q9HBX8 967 aa27.82■■■□□ 2.04
COL19A1-203ENST00000478620 RNMTO43148 476 aaKnown RBP27.81■■■□□ 2.04
COL19A1-203ENST00000478620 R3HDM1Q15032 1099 aaKnown RBP27.81■■■□□ 2.04
COL19A1-203ENST00000478620 SLC27A3Q5K4L6 730 aa27.81■■■□□ 2.04
COL19A1-203ENST00000478620 NFATC2IPQ8NCF5 419 aa27.81■■■□□ 2.04
COL19A1-203ENST00000478620 CCNL1Q9UK58 526 aaPredicted RBP27.8■■■□□ 2.04
COL19A1-203ENST00000478620 KDM6AO15550 1401 aaPredicted RBP27.79■■■□□ 2.04
COL19A1-203ENST00000478620 MAPK8IP3Q9UPT6 1336 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 KCNQ4P56696 695 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 STK32BQ9NY57 414 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 ASAP1Q9ULH1 1129 aa27.79■■■□□ 2.04
COL19A1-203ENST00000478620 PALLDQ8WX93 1383 aa27.78■■■□□ 2.04
COL19A1-203ENST00000478620 TOGARAM1Q9Y4F4 1720 aa27.78■■■□□ 2.04
COL19A1-203ENST00000478620 MAP3K5Q99683 1374 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 ITGB4P16144 1822 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RTF1Q92541 710 aaKnown RBP27.77■■■□□ 2.04
COL19A1-203ENST00000478620 LRRC4BQ9NT99 713 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RGPD3A6NKT7 1758 aaPredicted RBP27.77■■■□□ 2.04
COL19A1-203ENST00000478620 RGPD4Q7Z3J3 1758 aa27.77■■■□□ 2.04
COL19A1-203ENST00000478620 ATG3Q9NT62 314 aa27.76■■■□□ 2.03
COL19A1-203ENST00000478620 SLC52A2Q9HAB3 445 aa27.75■■■□□ 2.03
COL19A1-203ENST00000478620 RREB1Q92766 1687 aa27.75■■■□□ 2.03
COL19A1-203ENST00000478620 HMGB2P26583 209 aaKnown RBP27.74■■■□□ 2.03
COL19A1-203ENST00000478620 TEFQ10587 303 aa27.74■■■□□ 2.03
COL19A1-203ENST00000478620 PLEKHF1Q96S99 279 aa27.74■■■□□ 2.03
COL19A1-203ENST00000478620 RBM42Q9BTD8 480 aaKnown RBP27.73■■■□□ 2.03
COL19A1-203ENST00000478620 NUP188Q5SRE5 1749 aa27.72■■■□□ 2.03
COL19A1-203ENST00000478620 IL17REQ8NFR9 667 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms