RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 POLKQ9UBT6 870 aa16.11■□□□□ 0.17
SKI-202ENST00000478223 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
SKI-202ENST00000478223 NSD2O96028 1365 aa16.11■□□□□ 0.17
SKI-202ENST00000478223 LRP5O75197 1615 aa16.1■□□□□ 0.17
SKI-202ENST00000478223 PPM1GO15355 546 aaPredicted RBP16.1■□□□□ 0.17
SKI-202ENST00000478223 CASZ1Q86V15 1759 aa16.09■□□□□ 0.17
SKI-202ENST00000478223 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
SKI-202ENST00000478223 KCNQ2O43526 872 aa16.09■□□□□ 0.17
SKI-202ENST00000478223 PAPPAQ13219 1627 aa16.08■□□□□ 0.17
SKI-202ENST00000478223 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.16
SKI-202ENST00000478223 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
SKI-202ENST00000478223 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
SKI-202ENST00000478223 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.16
SKI-202ENST00000478223 AMER1Q5JTC6 1135 aaPredicted RBP16.07■□□□□ 0.16
SKI-202ENST00000478223 PER1O15534 1290 aaPredicted RBP16.06■□□□□ 0.16
SKI-202ENST00000478223 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
SKI-202ENST00000478223 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
SKI-202ENST00000478223 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
SKI-202ENST00000478223 PLSCR1O15162 318 aa16.03■□□□□ 0.16
SKI-202ENST00000478223 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
SKI-202ENST00000478223 R3HDM1Q15032 1099 aaKnown RBP16.03■□□□□ 0.16
SKI-202ENST00000478223 MORC1Q86VD1 984 aa16.03■□□□□ 0.16
SKI-202ENST00000478223 PROM2Q8N271 834 aa16.03■□□□□ 0.16
SKI-202ENST00000478223 ZCRB1Q8TBF4 217 aaKnown RBP16.03■□□□□ 0.16
SKI-202ENST00000478223 EYA1Q99502 592 aa16.03■□□□□ 0.16
SKI-202ENST00000478223 C5P01031 1676 aa16.02■□□□□ 0.15
SKI-202ENST00000478223 SCN11AQ9UI33 1791 aa16.01■□□□□ 0.15
SKI-202ENST00000478223 TATP17735 454 aaPredicted RBP16.01■□□□□ 0.15
SKI-202ENST00000478223 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
SKI-202ENST00000478223 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
SKI-202ENST00000478223 ANO8Q9HCE9 1232 aaPredicted RBP16■□□□□ 0.15
SKI-202ENST00000478223 IGSF1Q8N6C5 1336 aa15.98■□□□□ 0.15
SKI-202ENST00000478223 CYP27B1O15528 508 aa15.98■□□□□ 0.15
SKI-202ENST00000478223 CNGB1Q14028 1251 aaPredicted RBP15.98■□□□□ 0.15
SKI-202ENST00000478223 TXNRD1Q16881 649 aa15.98■□□□□ 0.15
SKI-202ENST00000478223 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
SKI-202ENST00000478223 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
SKI-202ENST00000478223 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
SKI-202ENST00000478223 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
SKI-202ENST00000478223 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
SKI-202ENST00000478223 AEBP1Q8IUX7 1158 aa15.95■□□□□ 0.14
SKI-202ENST00000478223 SYTL4Q96C24 671 aaPredicted RBP15.95■□□□□ 0.14
SKI-202ENST00000478223 COL24A1Q17RW2 1714 aa15.94■□□□□ 0.14
SKI-202ENST00000478223 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
SKI-202ENST00000478223 UBR3Q6ZT12 1888 aa15.94■□□□□ 0.14
SKI-202ENST00000478223 IL13P35225 146 aa15.93■□□□□ 0.14
SKI-202ENST00000478223 MTHFSP49914 203 aa15.93■□□□□ 0.14
SKI-202ENST00000478223 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
SKI-202ENST00000478223 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
SKI-202ENST00000478223 KCNQ4P56696 695 aa15.92■□□□□ 0.14
SKI-202ENST00000478223 COL5A3P25940 1745 aaPredicted RBP15.91■□□□□ 0.14
SKI-202ENST00000478223 KDRP35968 1356 aa15.91■□□□□ 0.14
SKI-202ENST00000478223 ADAMTS7Q9UKP4 1686 aa15.91■□□□□ 0.14
SKI-202ENST00000478223 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
SKI-202ENST00000478223 DLG5Q8TDM6 1919 aa15.9■□□□□ 0.14
SKI-202ENST00000478223 ZNF827Q17R98 1081 aa15.9■□□□□ 0.14
SKI-202ENST00000478223 SPG7Q9UQ90 795 aa15.9■□□□□ 0.14
SKI-202ENST00000478223 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
SKI-202ENST00000478223 KDM6AO15550 1401 aaPredicted RBP15.89■□□□□ 0.13
SKI-202ENST00000478223 PHKG2P15735 406 aa15.89■□□□□ 0.13
SKI-202ENST00000478223 NKX1-1Q15270 411 aaPredicted RBP15.89■□□□□ 0.13
SKI-202ENST00000478223 SULT6B1Q6IMI4 303 aa15.89■□□□□ 0.13
SKI-202ENST00000478223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.89■□□□□ 0.13
SKI-202ENST00000478223 PLEKHG2Q9H7P9 1386 aa15.88■□□□□ 0.13
SKI-202ENST00000478223 SLC15A2Q16348 729 aa15.88■□□□□ 0.13
SKI-202ENST00000478223 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
SKI-202ENST00000478223 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
SKI-202ENST00000478223 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
SKI-202ENST00000478223 TJP1Q07157 1748 aa15.87■□□□□ 0.13
SKI-202ENST00000478223 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
SKI-202ENST00000478223 STK32BQ9NY57 414 aa15.86■□□□□ 0.13
SKI-202ENST00000478223 HMOX1P09601 288 aa15.85■□□□□ 0.13
SKI-202ENST00000478223 PIGBQ92521 554 aa15.85■□□□□ 0.13
SKI-202ENST00000478223 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
SKI-202ENST00000478223 UBR2Q8IWV8 1755 aa15.85■□□□□ 0.13
SKI-202ENST00000478223 DIAPH1O60610 1272 aaKnown RBP15.84■□□□□ 0.13
SKI-202ENST00000478223 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
SKI-202ENST00000478223 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
SKI-202ENST00000478223 AKT1S1Q96B36 256 aa15.84■□□□□ 0.13
SKI-202ENST00000478223 CICQ96RK0 1608 aaPredicted RBP15.83■□□□□ 0.13
SKI-202ENST00000478223 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
SKI-202ENST00000478223 CCNL1Q9UK58 526 aaPredicted RBP15.83■□□□□ 0.12
SKI-202ENST00000478223 C4AP0C0L4 1744 aa15.82■□□□□ 0.12
SKI-202ENST00000478223 ZBTB7AO95365 584 aa15.82■□□□□ 0.12
SKI-202ENST00000478223 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
SKI-202ENST00000478223 MRC1P22897 1456 aa15.81■□□□□ 0.12
SKI-202ENST00000478223 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
SKI-202ENST00000478223 PNPLA7Q6ZV29 1317 aa15.8■□□□□ 0.12
SKI-202ENST00000478223 AMOTQ4VCS5 1084 aa15.8■□□□□ 0.12
SKI-202ENST00000478223 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
SKI-202ENST00000478223 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
SKI-202ENST00000478223 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
SKI-202ENST00000478223 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
SKI-202ENST00000478223 PTGER2P43116 358 aa15.78■□□□□ 0.12
SKI-202ENST00000478223 DCAF5Q96JK2 942 aa15.78■□□□□ 0.12
SKI-202ENST00000478223 ATG3Q9NT62 314 aa15.78■□□□□ 0.12
SKI-202ENST00000478223 ERVV-2B6SEH9 535 aa15.77■□□□□ 0.12
SKI-202ENST00000478223 MTHFSDQ2M296 383 aaKnown RBP15.77■□□□□ 0.12
SKI-202ENST00000478223 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.12
SKI-202ENST00000478223 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms