RNA–Protein interactions for RNA: ENST00000477941.2

PDE4DIP-212, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-212ENST00000477941 SHANK3Q9BYB0 1731 aa18.23■□□□□ 0.51
PDE4DIP-212ENST00000477941 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
PDE4DIP-212ENST00000477941 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
PDE4DIP-212ENST00000477941 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
PDE4DIP-212ENST00000477941 HSP90AB2PQ58FF8 381 aa18.22■□□□□ 0.51
PDE4DIP-212ENST00000477941 CARD14Q9BXL6 1004 aa18.22■□□□□ 0.51
PDE4DIP-212ENST00000477941 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
PDE4DIP-212ENST00000477941 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
PDE4DIP-212ENST00000477941 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
PDE4DIP-212ENST00000477941 YY1P25490 414 aa18.2■□□□□ 0.5
PDE4DIP-212ENST00000477941 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
PDE4DIP-212ENST00000477941 RAPGEF4Q8WZA2 1011 aa18.2■□□□□ 0.5
PDE4DIP-212ENST00000477941 INSRP06213 1382 aa18.19■□□□□ 0.5
PDE4DIP-212ENST00000477941 FLT4P35916 1363 aa18.19■□□□□ 0.5
PDE4DIP-212ENST00000477941 NSD2O96028 1365 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 KCNQ4P56696 695 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 AKT1S1Q96B36 256 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 SGIP1Q9BQI5 828 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 FHDC1Q9C0D6 1143 aaPredicted RBP18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 CGNL1Q0VF96 1302 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 CLSPNQ9HAW4 1339 aa18.18■□□□□ 0.5
PDE4DIP-212ENST00000477941 KIF24Q5T7B8 1368 aa18.17■□□□□ 0.5
PDE4DIP-212ENST00000477941 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
PDE4DIP-212ENST00000477941 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
PDE4DIP-212ENST00000477941 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
PDE4DIP-212ENST00000477941 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
PDE4DIP-212ENST00000477941 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
PDE4DIP-212ENST00000477941 LY75O60449 1722 aa18.15■□□□□ 0.5
PDE4DIP-212ENST00000477941 ARXQ96QS3 562 aa18.14■□□□□ 0.49
PDE4DIP-212ENST00000477941 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
PDE4DIP-212ENST00000477941 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.49
PDE4DIP-212ENST00000477941 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.49
PDE4DIP-212ENST00000477941 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
PDE4DIP-212ENST00000477941 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
PDE4DIP-212ENST00000477941 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
PDE4DIP-212ENST00000477941 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
PDE4DIP-212ENST00000477941 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
PDE4DIP-212ENST00000477941 CYP27B1O15528 508 aa18.1■□□□□ 0.49
PDE4DIP-212ENST00000477941 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
PDE4DIP-212ENST00000477941 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
PDE4DIP-212ENST00000477941 MPRIPQ6WCQ1 1025 aa18.09■□□□□ 0.49
PDE4DIP-212ENST00000477941 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.49
PDE4DIP-212ENST00000477941 MAP2P11137 1827 aaKnown RBP18.08■□□□□ 0.48
PDE4DIP-212ENST00000477941 POLD1P28340 1107 aa18.08■□□□□ 0.48
PDE4DIP-212ENST00000477941 MAP3K5Q99683 1374 aa18.07■□□□□ 0.48
PDE4DIP-212ENST00000477941 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
PDE4DIP-212ENST00000477941 TNNT2P45379 298 aaPredicted RBP18.07■□□□□ 0.48
PDE4DIP-212ENST00000477941 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDE4DIP-212ENST00000477941 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
PDE4DIP-212ENST00000477941 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
PDE4DIP-212ENST00000477941 TOGARAM1Q9Y4F4 1720 aa18.06■□□□□ 0.48
PDE4DIP-212ENST00000477941 PALLDQ8WX93 1383 aa18.06■□□□□ 0.48
PDE4DIP-212ENST00000477941 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
PDE4DIP-212ENST00000477941 MSH5O43196 834 aa18.05■□□□□ 0.48
PDE4DIP-212ENST00000477941 HSPA5P11021 654 aaKnown RBP18.05■□□□□ 0.48
PDE4DIP-212ENST00000477941 CCER1Q8TC90 406 aaPredicted RBP18.05■□□□□ 0.48
PDE4DIP-212ENST00000477941 EYA1Q99502 592 aa18.05■□□□□ 0.48
PDE4DIP-212ENST00000477941 C5P01031 1676 aa18.05■□□□□ 0.48
PDE4DIP-212ENST00000477941 COL24A1Q17RW2 1714 aa18.04■□□□□ 0.48
PDE4DIP-212ENST00000477941 COL23A1Q86Y22 540 aaPredicted RBP18.04■□□□□ 0.48
PDE4DIP-212ENST00000477941 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
PDE4DIP-212ENST00000477941 ITGB4P16144 1822 aa18.04■□□□□ 0.48
PDE4DIP-212ENST00000477941 PIGBQ92521 554 aa18.02■□□□□ 0.48
PDE4DIP-212ENST00000477941 PANK3Q9H999 370 aa18.02■□□□□ 0.48
PDE4DIP-212ENST00000477941 EIF4A2Q14240 407 aaKnown RBP18.01■□□□□ 0.47
PDE4DIP-212ENST00000477941 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
PDE4DIP-212ENST00000477941 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
PDE4DIP-212ENST00000477941 TAF1LQ8IZX4 1826 aa18■□□□□ 0.47
PDE4DIP-212ENST00000477941 GPR162Q16538 588 aa18■□□□□ 0.47
PDE4DIP-212ENST00000477941 MSL1Q68DK7 614 aa18■□□□□ 0.47
PDE4DIP-212ENST00000477941 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18■□□□□ 0.47
PDE4DIP-212ENST00000477941 CHD4Q14839 1912 aa18■□□□□ 0.47
PDE4DIP-212ENST00000477941 PELP1Q8IZL8 1130 aaKnown RBP17.99■□□□□ 0.47
PDE4DIP-212ENST00000477941 NLGN2Q8NFZ4 835 aa17.99■□□□□ 0.47
PDE4DIP-212ENST00000477941 PHKG2P15735 406 aa17.98■□□□□ 0.47
PDE4DIP-212ENST00000477941 HMGB2P26583 209 aaKnown RBP17.98■□□□□ 0.47
PDE4DIP-212ENST00000477941 ZNF784Q8NCA9 323 aaPredicted RBP17.98■□□□□ 0.47
PDE4DIP-212ENST00000477941 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
PDE4DIP-212ENST00000477941 C4BP0C0L5 1744 aa17.98■□□□□ 0.47
PDE4DIP-212ENST00000477941 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
PDE4DIP-212ENST00000477941 AK7Q96M32 723 aa17.97■□□□□ 0.47
PDE4DIP-212ENST00000477941 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
PDE4DIP-212ENST00000477941 LOC102724428A0A0B4J2F2 783 aa17.95■□□□□ 0.46
PDE4DIP-212ENST00000477941 SIK1P57059 783 aa17.95■□□□□ 0.46
PDE4DIP-212ENST00000477941 AMIGO3Q86WK7 504 aa17.95■□□□□ 0.46
PDE4DIP-212ENST00000477941 ASAP1Q9ULH1 1129 aa17.95■□□□□ 0.46
PDE4DIP-212ENST00000477941 IGSF1Q8N6C5 1336 aa17.95■□□□□ 0.46
PDE4DIP-212ENST00000477941 PHF14O94880 888 aa17.94■□□□□ 0.46
PDE4DIP-212ENST00000477941 SMIM5Q71RC9 77 aa17.94■□□□□ 0.46
PDE4DIP-212ENST00000477941 MORC1Q86VD1 984 aa17.94■□□□□ 0.46
PDE4DIP-212ENST00000477941 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
PDE4DIP-212ENST00000477941 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
PDE4DIP-212ENST00000477941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.92■□□□□ 0.46
PDE4DIP-212ENST00000477941 PLEKHG2Q9H7P9 1386 aa17.91■□□□□ 0.46
PDE4DIP-212ENST00000477941 ATP6V1AP38606 617 aa17.91■□□□□ 0.46
PDE4DIP-212ENST00000477941 ITPK1Q13572 414 aa17.91■□□□□ 0.46
PDE4DIP-212ENST00000477941 ATG3Q9NT62 314 aa17.91■□□□□ 0.46
PDE4DIP-212ENST00000477941 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
PDE4DIP-212ENST00000477941 YBX3P16989 372 aaKnown RBP eCLIP17.9■□□□□ 0.461e-11■■■□□ 17.5
PDE4DIP-212ENST00000477941 GNPATO15228 680 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms