RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 NSD2O96028 1365 aa10.71□□□□□ -0.69
SPTLC1-205ENST00000477888 RBM46Q8TBY0 533 aaKnown RBP10.71□□□□□ -0.69
SPTLC1-205ENST00000477888 SYTL4Q96C24 671 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-205ENST00000477888 CENPJQ9HC77 1338 aaPredicted RBP10.71□□□□□ -0.69
SPTLC1-205ENST00000477888 NMRK2Q9NPI5 230 aa10.71□□□□□ -0.69
SPTLC1-205ENST00000477888 NFAT5O94916 1531 aa10.7□□□□□ -0.7
SPTLC1-205ENST00000477888 ANKRD36BQ8N2N9 1353 aa10.7□□□□□ -0.7
SPTLC1-205ENST00000477888 TTC21AQ8NDW8 1320 aa10.7□□□□□ -0.7
SPTLC1-205ENST00000477888 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
SPTLC1-205ENST00000477888 FLAD1Q8NFF5 587 aa10.7□□□□□ -0.7
SPTLC1-205ENST00000477888 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
SPTLC1-205ENST00000477888 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
SPTLC1-205ENST00000477888 FSTL1Q12841 308 aa10.68□□□□□ -0.7
SPTLC1-205ENST00000477888 PIAS4Q8N2W9 510 aaPredicted RBP10.68□□□□□ -0.7
SPTLC1-205ENST00000477888 AMIGO3Q86WK7 504 aa10.67□□□□□ -0.7
SPTLC1-205ENST00000477888 USP31Q70CQ4 1352 aa10.66□□□□□ -0.7
SPTLC1-205ENST00000477888 USP47Q96K76 1375 aa10.65□□□□□ -0.7
SPTLC1-205ENST00000477888 HMGB2P26583 209 aaKnown RBP10.65□□□□□ -0.7
SPTLC1-205ENST00000477888 RGPD5Q99666 1765 aa10.65□□□□□ -0.71
SPTLC1-205ENST00000477888 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
SPTLC1-205ENST00000477888 TUBGCP6Q96RT7 1819 aa10.64□□□□□ -0.71
SPTLC1-205ENST00000477888 ZCRB1Q8TBF4 217 aaKnown RBP10.64□□□□□ -0.71
SPTLC1-205ENST00000477888 HSPA1AP0DMV8 641 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 HSPA1BP0DMV9 641 aaKnown RBP10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 SMIM5Q71RC9 77 aa10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 C16orf71Q8IYS4 520 aaPredicted RBP10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 IP6K1Q92551 441 aa10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
SPTLC1-205ENST00000477888 CICQ96RK0 1608 aaPredicted RBP10.62□□□□□ -0.71
SPTLC1-205ENST00000477888 ARHGAP27Q6ZUM4 889 aa10.62□□□□□ -0.71
SPTLC1-205ENST00000477888 NME9Q86XW9 330 aa10.62□□□□□ -0.71
SPTLC1-205ENST00000477888 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■■□□ 18.1
SPTLC1-205ENST00000477888 KTN1Q86UP2 1357 aaKnown RBP10.62□□□□□ -0.71
SPTLC1-205ENST00000477888 LY75O60449 1722 aa10.61□□□□□ -0.71
SPTLC1-205ENST00000477888 WDR90Q96KV7 1748 aa10.61□□□□□ -0.71
SPTLC1-205ENST00000477888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.61□□□□□ -0.71
SPTLC1-205ENST00000477888 TGFB2P61812 414 aa10.61□□□□□ -0.71
SPTLC1-205ENST00000477888 BCS1LQ9Y276 419 aa10.61□□□□□ -0.71
SPTLC1-205ENST00000477888 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
SPTLC1-205ENST00000477888 C9orf131Q5VYM1 1079 aa10.6□□□□□ -0.71
SPTLC1-205ENST00000477888 LTV1Q96GA3 475 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-205ENST00000477888 AK7Q96M32 723 aa10.6□□□□□ -0.71
SPTLC1-205ENST00000477888 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
SPTLC1-205ENST00000477888 ZBTB22O15209 634 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 PHF14O94880 888 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 SSFA2P28290 1259 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 SMC1BQ8NDV3 1235 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 RRAGCQ9HB90 399 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 PALLDQ8WX93 1383 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 SBNO2Q9Y2G9 1366 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 PXDNLA1KZ92 1463 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 QRICH2Q9H0J4 1663 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
SPTLC1-205ENST00000477888 MMP10P09238 476 aa10.58□□□□□ -0.72
SPTLC1-205ENST00000477888 C10orf71Q711Q0 1435 aa10.58□□□□□ -0.72
SPTLC1-205ENST00000477888 KDM2BQ8NHM5 1336 aa10.58□□□□□ -0.72
SPTLC1-205ENST00000477888 DPEP1P16444 411 aa10.57□□□□□ -0.72
SPTLC1-205ENST00000477888 KCNA3P22001 575 aa10.57□□□□□ -0.72
SPTLC1-205ENST00000477888 KIAA1210Q9ULL0 1709 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 PLEKHG2Q9H7P9 1386 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 FCHSD2O94868 740 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 MPRIPQ6WCQ1 1025 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 MEGF6O75095 1541 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 CGNL1Q0VF96 1302 aa10.56□□□□□ -0.72
SPTLC1-205ENST00000477888 KCPQ6ZWJ8 1503 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 HOXC9P31274 260 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 NSD3Q9BZ95 1437 aa10.55□□□□□ -0.72
SPTLC1-205ENST00000477888 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
SPTLC1-205ENST00000477888 MAP3K19Q56UN5 1328 aa10.54□□□□□ -0.72
SPTLC1-205ENST00000477888 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 SIK1P57059 783 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 AMER1Q5JTC6 1135 aaPredicted RBP10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 PIGBQ92521 554 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
SPTLC1-205ENST00000477888 GNPATO15228 680 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 CYP27B1O15528 508 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 FBLN1P23142 703 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 SLC12A5Q9H2X9 1139 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 PRDM10Q9NQV6 1147 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 C4BP0C0L5 1744 aa10.52□□□□□ -0.73
SPTLC1-205ENST00000477888 C5P01031 1676 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 FOXN1O15353 648 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 VEGFAP15692 232 aaPredicted RBP10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 AMPHP49418 695 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 TMF1P82094 1093 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 ITPK1Q13572 414 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 USHBP1Q8N6Y0 703 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 RAPGEF4Q8WZA2 1011 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 PIM2Q9P1W9 311 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 PCDH11XQ9BZA7 1347 aa10.51□□□□□ -0.73
SPTLC1-205ENST00000477888 PCDH11YQ9BZA8 1340 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms