RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 IQSEC2Q5JU85 1478 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 KCNJ4P48050 445 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 AMPHP49418 695 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 ALDH1L2Q3SY69 923 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 NUCB1Q02818 461 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 ZNF830Q96NB3 372 aaPredicted RBP11.99□□□□□ -0.49
CMC1-209ENST00000477739 TSPYL4Q9UJ04 414 aa11.99□□□□□ -0.49
CMC1-209ENST00000477739 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 VAMP4O75379 141 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 IL13P35225 146 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
CMC1-209ENST00000477739 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 IFT57Q9NWB7 429 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 ALKQ9UM73 1620 aa11.98□□□□□ -0.49
CMC1-209ENST00000477739 HDAC1Q13547 482 aaPredicted RBP11.97□□□□□ -0.49
CMC1-209ENST00000477739 HSP90AB2PQ58FF8 381 aa11.97□□□□□ -0.49
CMC1-209ENST00000477739 API5Q9BZZ5 524 aaKnown RBP11.97□□□□□ -0.49
CMC1-209ENST00000477739 ZC3H13Q5T200 1668 aaKnown RBP11.97□□□□□ -0.49
CMC1-209ENST00000477739 ST18O60284 1047 aa11.97□□□□□ -0.49
CMC1-209ENST00000477739 ACEP12821 1306 aa11.97□□□□□ -0.49
CMC1-209ENST00000477739 ARHGEF28Q8N1W1 1705 aaKnown RBP11.96□□□□□ -0.49
CMC1-209ENST00000477739 PRDM10Q9NQV6 1147 aa11.96□□□□□ -0.49
CMC1-209ENST00000477739 BAG4O95429 457 aaKnown RBP11.96□□□□□ -0.49
CMC1-209ENST00000477739 TNRQ92752 1358 aa11.96□□□□□ -0.49
CMC1-209ENST00000477739 A2ML1A8K2U0 1454 aa11.96□□□□□ -0.5
CMC1-209ENST00000477739 SMC5Q8IY18 1101 aa11.96□□□□□ -0.5
CMC1-209ENST00000477739 CFAP44Q96MT7 982 aa11.96□□□□□ -0.5
CMC1-209ENST00000477739 G2E3Q7L622 706 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 TSC1Q92574 1164 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 SDSP20132 328 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 MRPL50Q8N5N7 158 aaKnown RBP11.95□□□□□ -0.5
CMC1-209ENST00000477739 ZBTB7BO15156 539 aaPredicted RBP11.95□□□□□ -0.5
CMC1-209ENST00000477739 FIBPO43427 364 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 CPA1P15085 419 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 GSPT1P15170 499 aaKnown RBP11.95□□□□□ -0.5
CMC1-209ENST00000477739 STK31Q9BXU1 1019 aa11.95□□□□□ -0.5
CMC1-209ENST00000477739 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
CMC1-209ENST00000477739 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
CMC1-209ENST00000477739 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
CMC1-209ENST00000477739 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
CMC1-209ENST00000477739 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
CMC1-209ENST00000477739 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
CMC1-209ENST00000477739 CD163L1Q9NR16 1453 aa11.94□□□□□ -0.5
CMC1-209ENST00000477739 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
CMC1-209ENST00000477739 C17orf53Q8N3J3 647 aaPredicted RBP11.94□□□□□ -0.5
CMC1-209ENST00000477739 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
CMC1-209ENST00000477739 TMEM131LA2VDJ0 1609 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 A0A0G2JS52 829 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 NLRP6P59044 892 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 INTS3Q68E01 1043 aaKnown RBP11.93□□□□□ -0.5
CMC1-209ENST00000477739 TCEANC2Q96MN5 208 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 LTKP29376 864 aa11.93□□□□□ -0.5
CMC1-209ENST00000477739 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
CMC1-209ENST00000477739 JARID2Q92833 1246 aaPredicted RBP11.93□□□□□ -0.5
CMC1-209ENST00000477739 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
CMC1-209ENST00000477739 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
CMC1-209ENST00000477739 KDM4AO75164 1064 aa11.92□□□□□ -0.5
CMC1-209ENST00000477739 SPC24Q8NBT2 197 aa11.92□□□□□ -0.5
CMC1-209ENST00000477739 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
CMC1-209ENST00000477739 RICTORQ6R327 1708 aa11.92□□□□□ -0.5
CMC1-209ENST00000477739 BMP2KLQ5H9B9 411 aa11.91□□□□□ -0.5
CMC1-209ENST00000477739 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
CMC1-209ENST00000477739 PLEKHM2Q8IWE5 1019 aa11.91□□□□□ -0.5
CMC1-209ENST00000477739 SURF6O75683 361 aaKnown RBP11.91□□□□□ -0.5
CMC1-209ENST00000477739 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
CMC1-209ENST00000477739 MYO5BQ9ULV0 1848 aa11.91□□□□□ -0.5
CMC1-209ENST00000477739 NSFL1CQ9UNZ2 370 aaKnown RBP11.91□□□□□ -0.5
CMC1-209ENST00000477739 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CMC1-209ENST00000477739 ATP7BP35670 1465 aa11.9□□□□□ -0.5
CMC1-209ENST00000477739 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 SIL1Q9H173 461 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 RBSNQ9H1K0 784 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 ROBO2Q9HCK4 1378 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 ZSCAN23Q3MJ62 389 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
CMC1-209ENST00000477739 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 CEBPZQ03701 1054 aaKnown RBP11.89□□□□□ -0.51
CMC1-209ENST00000477739 STK3Q13188 491 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 RAB3GAP1Q15042 981 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 DRC7Q8IY82 874 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 ZMYND15Q9H091 742 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 MED14O60244 1454 aa11.89□□□□□ -0.51
CMC1-209ENST00000477739 COL3A1P02461 1466 aaPredicted RBP11.89□□□□□ -0.51
CMC1-209ENST00000477739 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 LRRC7Q96NW7 1537 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 HMMRO75330 724 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 CLTCQ00610 1675 aaKnown RBP11.88□□□□□ -0.51
CMC1-209ENST00000477739 REC8O95072 547 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 FGD1P98174 961 aa11.88□□□□□ -0.51
CMC1-209ENST00000477739 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
CMC1-209ENST00000477739 MCCP23508 829 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms