RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DNAJC5GQ8N7S2 189 aa16.11■□□□□ 0.17
LSM2-212ENST00000477182 ERBB3P21860 1342 aa16.11■□□□□ 0.17
LSM2-212ENST00000477182 ST20-MTHFSA0A0A6YYL1 179 aa16.1■□□□□ 0.17
LSM2-212ENST00000477182 LY75O60449 1722 aa16.09■□□□□ 0.17
LSM2-212ENST00000477182 HMGB2P26583 209 aaKnown RBP16.09■□□□□ 0.17
LSM2-212ENST00000477182 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
LSM2-212ENST00000477182 TOMM70O94826 608 aa16.07■□□□□ 0.16
LSM2-212ENST00000477182 KCNQ4P56696 695 aa16.07■□□□□ 0.16
LSM2-212ENST00000477182 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
LSM2-212ENST00000477182 DDX54Q8TDD1 881 aaKnown RBP16.06■□□□□ 0.16
LSM2-212ENST00000477182 CCNL1Q9UK58 526 aaPredicted RBP16.06■□□□□ 0.16
LSM2-212ENST00000477182 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 EVC2Q86UK5 1308 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 CAPN15O75808 1086 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 PRELPP51888 382 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 COL13A1Q5TAT6 717 aaPredicted RBP16.05■□□□□ 0.16
LSM2-212ENST00000477182 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
LSM2-212ENST00000477182 PRIM1P49642 420 aaKnown RBP16.04■□□□□ 0.16
LSM2-212ENST00000477182 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
LSM2-212ENST00000477182 TESK2Q96S53 571 aa16.04■□□□□ 0.16
LSM2-212ENST00000477182 TNS4Q8IZW8 715 aa16.03■□□□□ 0.16
LSM2-212ENST00000477182 LTN1O94822 1766 aa16.03■□□□□ 0.16
LSM2-212ENST00000477182 SBNO2Q9Y2G9 1366 aa16.02■□□□□ 0.16
LSM2-212ENST00000477182 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.15
LSM2-212ENST00000477182 WDR90Q96KV7 1748 aa16.02■□□□□ 0.15
LSM2-212ENST00000477182 IGSF1Q8N6C5 1336 aa16.01■□□□□ 0.15
LSM2-212ENST00000477182 JMYQ8N9B5 988 aa16.01■□□□□ 0.15
LSM2-212ENST00000477182 KLRG1Q96E93 195 aa16.01■□□□□ 0.15
LSM2-212ENST00000477182 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
LSM2-212ENST00000477182 NSD2O96028 1365 aa16■□□□□ 0.15
LSM2-212ENST00000477182 USP31Q70CQ4 1352 aa16■□□□□ 0.15
LSM2-212ENST00000477182 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
LSM2-212ENST00000477182 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
LSM2-212ENST00000477182 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
LSM2-212ENST00000477182 TMF1P82094 1093 aa15.98■□□□□ 0.15
LSM2-212ENST00000477182 C5P01031 1676 aa15.98■□□□□ 0.15
LSM2-212ENST00000477182 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
LSM2-212ENST00000477182 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
LSM2-212ENST00000477182 SLC24A1O60721 1099 aa15.96■□□□□ 0.15
LSM2-212ENST00000477182 MON2Q7Z3U7 1717 aa15.96■□□□□ 0.15
LSM2-212ENST00000477182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.95■□□□□ 0.14
LSM2-212ENST00000477182 C16orf71Q8IYS4 520 aaPredicted RBP15.95■□□□□ 0.14
LSM2-212ENST00000477182 ZCRB1Q8TBF4 217 aaKnown RBP15.95■□□□□ 0.14
LSM2-212ENST00000477182 POLR3GLQ9BT43 218 aa15.95■□□□□ 0.14
LSM2-212ENST00000477182 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
LSM2-212ENST00000477182 FSTL1Q12841 308 aa15.94■□□□□ 0.14
LSM2-212ENST00000477182 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
LSM2-212ENST00000477182 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
LSM2-212ENST00000477182 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
LSM2-212ENST00000477182 NSD3Q9BZ95 1437 aa15.93■□□□□ 0.14
LSM2-212ENST00000477182 IP6K1Q92551 441 aa15.92■□□□□ 0.14
LSM2-212ENST00000477182 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
LSM2-212ENST00000477182 CDCA8Q53HL2 280 aa15.91■□□□□ 0.14
LSM2-212ENST00000477182 NME9Q86XW9 330 aa15.91■□□□□ 0.14
LSM2-212ENST00000477182 AK7Q96M32 723 aa15.91■□□□□ 0.14
LSM2-212ENST00000477182 PCNTO95613 3336 aa15.91■□□□□ 0.14
LSM2-212ENST00000477182 LTV1Q96GA3 475 aaPredicted RBP15.9■□□□□ 0.14
LSM2-212ENST00000477182 C4BP0C0L5 1744 aa15.89■□□□□ 0.13
LSM2-212ENST00000477182 HTRA3P83110 453 aa15.89■□□□□ 0.13
LSM2-212ENST00000477182 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
LSM2-212ENST00000477182 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
LSM2-212ENST00000477182 PLEKHG2Q9H7P9 1386 aa15.87■□□□□ 0.13
LSM2-212ENST00000477182 UBR3Q6ZT12 1888 aa15.87■□□□□ 0.13
LSM2-212ENST00000477182 SLC34A2O95436 690 aa15.87■□□□□ 0.13
LSM2-212ENST00000477182 TGFB2P61812 414 aa15.87■□□□□ 0.13
LSM2-212ENST00000477182 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
LSM2-212ENST00000477182 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
LSM2-212ENST00000477182 PHF14O94880 888 aa15.86■□□□□ 0.13
LSM2-212ENST00000477182 SSFA2P28290 1259 aa15.86■□□□□ 0.13
LSM2-212ENST00000477182 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
LSM2-212ENST00000477182 HDGFL2Q7Z4V5 671 aaPredicted RBP15.86■□□□□ 0.13
LSM2-212ENST00000477182 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
LSM2-212ENST00000477182 BCS1LQ9Y276 419 aa15.86■□□□□ 0.13
LSM2-212ENST00000477182 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
LSM2-212ENST00000477182 KIF13BQ9NQT8 1826 aa15.85■□□□□ 0.13
LSM2-212ENST00000477182 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
LSM2-212ENST00000477182 TOGARAM1Q9Y4F4 1720 aa15.85■□□□□ 0.13
LSM2-212ENST00000477182 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
LSM2-212ENST00000477182 MEGF6O75095 1541 aa15.84■□□□□ 0.13
LSM2-212ENST00000477182 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
LSM2-212ENST00000477182 HSPA1AP0DMV8 641 aaKnown RBP15.83■□□□□ 0.12
LSM2-212ENST00000477182 HSPA1BP0DMV9 641 aaKnown RBP15.83■□□□□ 0.12
LSM2-212ENST00000477182 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
LSM2-212ENST00000477182 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
LSM2-212ENST00000477182 RGPD2P0DJD1 1756 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
LSM2-212ENST00000477182 HOXC9P31274 260 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 AMPHP49418 695 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
LSM2-212ENST00000477182 MPRIPQ6WCQ1 1025 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 AMIGO3Q86WK7 504 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 RAPGEF4Q8WZA2 1011 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 CD163L1Q9NR16 1453 aa15.82■□□□□ 0.12
LSM2-212ENST00000477182 C9orf131Q5VYM1 1079 aa15.81■□□□□ 0.12
LSM2-212ENST00000477182 PCDH11XQ9BZA7 1347 aa15.81■□□□□ 0.12
LSM2-212ENST00000477182 PCDH11YQ9BZA8 1340 aa15.81■□□□□ 0.12
LSM2-212ENST00000477182 KIAA1551Q9HCM1 1747 aa15.81■□□□□ 0.12
LSM2-212ENST00000477182 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms