RNA–Protein interactions for RNA: ENST00000477012.5

RNF7-203, Transcript of ring finger protein 7, humanhuman

TSL 1 (best)

Gene RNF7, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-203ENST00000477012 ZNF827Q17R98 1081 aa22.8■■□□□ 1.24
RNF7-203ENST00000477012 MTFR1LQ9H019 292 aa22.8■■□□□ 1.24
RNF7-203ENST00000477012 LRRC4BQ9NT99 713 aa22.8■■□□□ 1.24
RNF7-203ENST00000477012 SGIP1Q9BQI5 828 aa22.79■■□□□ 1.24
RNF7-203ENST00000477012 YY1P25490 414 aa22.78■■□□□ 1.24
RNF7-203ENST00000477012 NSD2O96028 1365 aa22.77■■□□□ 1.24
RNF7-203ENST00000477012 COL24A1Q17RW2 1714 aa22.77■■□□□ 1.23
RNF7-203ENST00000477012 DCAF8L1A6NGE4 600 aa22.76■■□□□ 1.23
RNF7-203ENST00000477012 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
RNF7-203ENST00000477012 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
RNF7-203ENST00000477012 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
RNF7-203ENST00000477012 SMG6Q86US8 1419 aaKnown RBP22.75■■□□□ 1.23
RNF7-203ENST00000477012 ANKRD26Q9UPS8 1709 aa22.75■■□□□ 1.23
RNF7-203ENST00000477012 CDCA8Q53HL2 280 aa22.75■■□□□ 1.23
RNF7-203ENST00000477012 PRIM1P49642 420 aaKnown RBP22.74■■□□□ 1.23
RNF7-203ENST00000477012 SLC27A3Q5K4L6 730 aa22.74■■□□□ 1.23
RNF7-203ENST00000477012 USHBP1Q8N6Y0 703 aa22.74■■□□□ 1.23
RNF7-203ENST00000477012 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
RNF7-203ENST00000477012 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
RNF7-203ENST00000477012 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
RNF7-203ENST00000477012 INSRP06213 1382 aa22.73■■□□□ 1.23
RNF7-203ENST00000477012 FLT4P35916 1363 aa22.73■■□□□ 1.23
RNF7-203ENST00000477012 SYT17Q9BSW7 474 aa22.72■■□□□ 1.23
RNF7-203ENST00000477012 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
RNF7-203ENST00000477012 NSD3Q9BZ95 1437 aa22.72■■□□□ 1.23
RNF7-203ENST00000477012 HSP90AB2PQ58FF8 381 aa22.71■■□□□ 1.23
RNF7-203ENST00000477012 CGNL1Q0VF96 1302 aa22.71■■□□□ 1.23
RNF7-203ENST00000477012 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
RNF7-203ENST00000477012 PKD1L3Q7Z443 1732 aa22.7■■□□□ 1.22
RNF7-203ENST00000477012 MAP2P11137 1827 aaKnown RBP22.69■■□□□ 1.22
RNF7-203ENST00000477012 TOGARAM1Q9Y4F4 1720 aa22.69■■□□□ 1.22
RNF7-203ENST00000477012 KCNQ4P56696 695 aa22.69■■□□□ 1.22
RNF7-203ENST00000477012 CHD4Q14839 1912 aa22.69■■□□□ 1.22
RNF7-203ENST00000477012 MAP3K5Q99683 1374 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 PNPLA7Q6ZV29 1317 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 RAPGEF4Q8WZA2 1011 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 ARXQ96QS3 562 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 ITGB4P16144 1822 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 C5P01031 1676 aa22.68■■□□□ 1.22
RNF7-203ENST00000477012 TAF1LQ8IZX4 1826 aa22.66■■□□□ 1.22
RNF7-203ENST00000477012 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
RNF7-203ENST00000477012 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
RNF7-203ENST00000477012 NCAPD2Q15021 1401 aa22.65■■□□□ 1.22
RNF7-203ENST00000477012 GOLGB1Q14789 3259 aaKnown RBP22.64■■□□□ 1.22
RNF7-203ENST00000477012 PCDH11XQ9BZA7 1347 aa22.64■■□□□ 1.22
RNF7-203ENST00000477012 PCDH11YQ9BZA8 1340 aa22.64■■□□□ 1.22
RNF7-203ENST00000477012 SLC16A10Q8TF71 515 aa22.64■■□□□ 1.21
RNF7-203ENST00000477012 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
RNF7-203ENST00000477012 CCNL1Q9UK58 526 aaPredicted RBP22.63■■□□□ 1.21
RNF7-203ENST00000477012 CYP27B1O15528 508 aa22.6■■□□□ 1.21
RNF7-203ENST00000477012 POLD1P28340 1107 aa22.58■■□□□ 1.21
RNF7-203ENST00000477012 PPM1GO15355 546 aaPredicted RBP22.57■■□□□ 1.2
RNF7-203ENST00000477012 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
RNF7-203ENST00000477012 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
RNF7-203ENST00000477012 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
RNF7-203ENST00000477012 UBR3Q6ZT12 1888 aa22.54■■□□□ 1.2
RNF7-203ENST00000477012 MPRIPQ6WCQ1 1025 aa22.54■■□□□ 1.2
RNF7-203ENST00000477012 COL23A1Q86Y22 540 aaPredicted RBP22.54■■□□□ 1.2
RNF7-203ENST00000477012 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
RNF7-203ENST00000477012 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
RNF7-203ENST00000477012 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
RNF7-203ENST00000477012 EYA1Q99502 592 aa22.52■■□□□ 1.2
RNF7-203ENST00000477012 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
RNF7-203ENST00000477012 ZNF784Q8NCA9 323 aaPredicted RBP22.51■■□□□ 1.19
RNF7-203ENST00000477012 MSH5O43196 834 aa22.5■■□□□ 1.19
RNF7-203ENST00000477012 NLGN2Q8NFZ4 835 aa22.49■■□□□ 1.19
RNF7-203ENST00000477012 SPG7Q9UQ90 795 aa22.49■■□□□ 1.19
RNF7-203ENST00000477012 GPR162Q16538 588 aa22.48■■□□□ 1.19
RNF7-203ENST00000477012 PIGBQ92521 554 aa22.48■■□□□ 1.19
RNF7-203ENST00000477012 SMARCC1Q92922 1105 aaPredicted RBP22.48■■□□□ 1.19
RNF7-203ENST00000477012 HSPA5P11021 654 aaKnown RBP22.47■■□□□ 1.19
RNF7-203ENST00000477012 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.19
RNF7-203ENST00000477012 EIF4A2Q14240 407 aaKnown RBP22.47■■□□□ 1.19
RNF7-203ENST00000477012 MSL1Q68DK7 614 aa22.47■■□□□ 1.19
RNF7-203ENST00000477012 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.47■■□□□ 1.19
RNF7-203ENST00000477012 TNNT2P45379 298 aaPredicted RBP22.46■■□□□ 1.19
RNF7-203ENST00000477012 HMGB2P26583 209 aaKnown RBP22.45■■□□□ 1.18
RNF7-203ENST00000477012 PHKG2P15735 406 aa22.44■■□□□ 1.18
RNF7-203ENST00000477012 AMIGO3Q86WK7 504 aa22.44■■□□□ 1.18
RNF7-203ENST00000477012 FLAD1Q8NFF5 587 aa22.44■■□□□ 1.18
RNF7-203ENST00000477012 PLEKHG2Q9H7P9 1386 aa22.44■■□□□ 1.18
RNF7-203ENST00000477012 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
RNF7-203ENST00000477012 AK7Q96M32 723 aa22.43■■□□□ 1.18
RNF7-203ENST00000477012 PANK3Q9H999 370 aa22.43■■□□□ 1.18
RNF7-203ENST00000477012 IGSF1Q8N6C5 1336 aa22.42■■□□□ 1.18
RNF7-203ENST00000477012 IFNL2Q8IZJ0 200 aa22.42■■□□□ 1.18
RNF7-203ENST00000477012 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
RNF7-203ENST00000477012 LOC102724428A0A0B4J2F2 783 aa22.4■■□□□ 1.18
RNF7-203ENST00000477012 SIK1P57059 783 aa22.4■■□□□ 1.18
RNF7-203ENST00000477012 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
RNF7-203ENST00000477012 YBX3P16989 372 aaKnown RBP eCLIP22.39■■□□□ 1.173e-7■■■■□ 19.4
RNF7-203ENST00000477012 SMIM5Q71RC9 77 aa22.39■■□□□ 1.17
RNF7-203ENST00000477012 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
RNF7-203ENST00000477012 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.17
RNF7-203ENST00000477012 COL5A3P25940 1745 aaPredicted RBP22.38■■□□□ 1.17
RNF7-203ENST00000477012 PHF14O94880 888 aa22.38■■□□□ 1.17
RNF7-203ENST00000477012 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.37■■□□□ 1.17
RNF7-203ENST00000477012 ITPK1Q13572 414 aa22.37■■□□□ 1.17
RNF7-203ENST00000477012 KDRP35968 1356 aa22.37■■□□□ 1.17
RNF7-203ENST00000477012 SSFA2P28290 1259 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms