RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PLEKHO1Q53GL0 409 aaPredicted RBP37.47■■■■□ 3.59
VEGFA-211ENST00000476772 HTATSF1O43719 755 aaKnown RBP37.46■■■■□ 3.59
VEGFA-211ENST00000476772 ZNF853P0CG23 659 aa37.46■■■■□ 3.59
VEGFA-211ENST00000476772 GNAI1P63096 354 aa37.46■■■■□ 3.59
VEGFA-211ENST00000476772 IRX6P78412 446 aaPredicted RBP37.46■■■■□ 3.59
VEGFA-211ENST00000476772 AMOTQ4VCS5 1084 aa37.46■■■■□ 3.59
VEGFA-211ENST00000476772 TOM1L2Q6ZVM7 507 aa37.46■■■■□ 3.59
VEGFA-211ENST00000476772 RAPGEF4Q8WZA2 1011 aa37.46■■■■□ 3.59
VEGFA-211ENST00000476772 MEGF6O75095 1541 aa37.45■■■■□ 3.59
VEGFA-211ENST00000476772 STRN4Q9NRL3 753 aa37.45■■■■□ 3.59
VEGFA-211ENST00000476772 LRRC37A3O60309 1634 aa37.44■■■■□ 3.58
VEGFA-211ENST00000476772 CFAP44Q96MT7 982 aa37.44■■■■□ 3.58
VEGFA-211ENST00000476772 BTG4Q9NY30 223 aa37.44■■■■□ 3.58
VEGFA-211ENST00000476772 CRB1P82279 1406 aa37.43■■■■□ 3.58
VEGFA-211ENST00000476772 RRP1P56182 461 aaKnown RBP37.43■■■■□ 3.58
VEGFA-211ENST00000476772 EVA1CP58658 441 aa37.43■■■■□ 3.58
VEGFA-211ENST00000476772 ZNF530Q6P9A1 599 aaPredicted RBP37.42■■■■□ 3.58
VEGFA-211ENST00000476772 TATP17735 454 aaPredicted RBP37.41■■■■□ 3.58
VEGFA-211ENST00000476772 EXOSC9Q06265 439 aaKnown RBP37.41■■■■□ 3.58
VEGFA-211ENST00000476772 LARP1Q6PKG0 1096 aaKnown RBP37.41■■■■□ 3.58
VEGFA-211ENST00000476772 NUTM2BA6NNL0 878 aaPredicted RBP37.4■■■■□ 3.58
VEGFA-211ENST00000476772 NUTM2EB1AL46 878 aaPredicted RBP37.4■■■■□ 3.58
VEGFA-211ENST00000476772 ADAMTS2O95450 1211 aa37.4■■■■□ 3.58
VEGFA-211ENST00000476772 NUTM2AQ8IVF1 878 aaPredicted RBP37.4■■■■□ 3.58
VEGFA-211ENST00000476772 MBIPQ9NS73 344 aa37.4■■■■□ 3.58
VEGFA-211ENST00000476772 JCADQ9P266 1359 aa37.4■■■■□ 3.58
VEGFA-211ENST00000476772 PLCH1Q4KWH8 1693 aa37.39■■■■□ 3.58
VEGFA-211ENST00000476772 CARD10Q9BWT7 1032 aa37.38■■■■□ 3.57
VEGFA-211ENST00000476772 AKAP4Q5JQC9 854 aa37.37■■■■□ 3.57
VEGFA-211ENST00000476772 IL17REQ8NFR9 667 aa37.37■■■■□ 3.57
VEGFA-211ENST00000476772 PLEKHG2Q9H7P9 1386 aa37.37■■■■□ 3.57
VEGFA-211ENST00000476772 PKD1L3Q7Z443 1732 aa37.35■■■■□ 3.57
VEGFA-211ENST00000476772 PARP4Q9UKK3 1724 aaKnown RBP37.35■■■■□ 3.57
VEGFA-211ENST00000476772 C1orf141Q5JVX7 400 aa37.34■■■■□ 3.57
VEGFA-211ENST00000476772 CHL1O00533 1208 aa37.33■■■■□ 3.57
VEGFA-211ENST00000476772 CT47B1P0C2W7 299 aaPredicted RBP37.33■■■■□ 3.57
VEGFA-211ENST00000476772 OVOS2A0A0G2JMS6 1433 aa37.32■■■■□ 3.57
VEGFA-211ENST00000476772 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.32■■■■□ 3.578e-31■□□□□ 9.1
VEGFA-211ENST00000476772 SPG7Q9UQ90 795 aa37.31■■■■□ 3.56
VEGFA-211ENST00000476772 CEMIPQ8WUJ3 1361 aa37.31■■■■□ 3.56
VEGFA-211ENST00000476772 BCAR3O75815 825 aa37.31■■■■□ 3.56
VEGFA-211ENST00000476772 VIRMAQ69YN4 1812 aaKnown RBP37.3■■■■□ 3.56
VEGFA-211ENST00000476772 RARSP54136 660 aaKnown RBP37.3■■■■□ 3.56
VEGFA-211ENST00000476772 NRAPQ86VF7 1730 aa37.3■■■■□ 3.56
VEGFA-211ENST00000476772 PLIN1O60240 522 aa37.29■■■■□ 3.56
VEGFA-211ENST00000476772 LGR6Q9HBX8 967 aa37.28■■■■□ 3.56
VEGFA-211ENST00000476772 MPRIPQ6WCQ1 1025 aa37.27■■■■□ 3.56
VEGFA-211ENST00000476772 HSPA1LP34931 641 aa37.26■■■■□ 3.56
VEGFA-211ENST00000476772 MIS18AQ9NYP9 233 aa37.25■■■■□ 3.55
VEGFA-211ENST00000476772 IL2RBP14784 551 aa37.25■■■■□ 3.55
VEGFA-211ENST00000476772 USP35Q9P2H5 1018 aa37.25■■■■□ 3.55
VEGFA-211ENST00000476772 TSPYL4Q9UJ04 414 aa37.25■■■■□ 3.55
VEGFA-211ENST00000476772 ADAMTS7Q9UKP4 1686 aa37.24■■■■□ 3.55
VEGFA-211ENST00000476772 NWD2Q9ULI1 1742 aa37.23■■■■□ 3.55
VEGFA-211ENST00000476772 RNMTO43148 476 aaKnown RBP37.23■■■■□ 3.55
VEGFA-211ENST00000476772 PHKG2P15735 406 aa37.23■■■■□ 3.55
VEGFA-211ENST00000476772 TSPYL6Q8N831 410 aa37.22■■■■□ 3.55
VEGFA-211ENST00000476772 TAF7Q15545 349 aaPredicted RBP37.21■■■■□ 3.55
VEGFA-211ENST00000476772 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.21■■■■□ 3.55
VEGFA-211ENST00000476772 SLIT2O94813 1529 aa37.21■■■■□ 3.55
VEGFA-211ENST00000476772 SPATA31A6Q5VVP1 1343 aa37.21■■■■□ 3.55
VEGFA-211ENST00000476772 C8orf58Q8NAV2 365 aa37.21■■■■□ 3.55
VEGFA-211ENST00000476772 BCL2L13Q9BXK5 485 aa37.21■■■■□ 3.55
VEGFA-211ENST00000476772 IFNL2Q8IZJ0 200 aa37.2■■■■□ 3.55
VEGFA-211ENST00000476772 CYP27B1O15528 508 aa37.19■■■■□ 3.54
VEGFA-211ENST00000476772 SCN11AQ9UI33 1791 aa37.18■■■■□ 3.54
VEGFA-211ENST00000476772 ELL2O00472 640 aaPredicted RBP37.18■■■■□ 3.54
VEGFA-211ENST00000476772 VAMP4O75379 141 aa37.18■■■■□ 3.54
VEGFA-211ENST00000476772 TWISTNBQ3B726 338 aaPredicted RBP37.18■■■■□ 3.54
VEGFA-211ENST00000476772 ERICH6BQ5W0A0 696 aa37.18■■■■□ 3.54
VEGFA-211ENST00000476772 ZCRB1Q8TBF4 217 aaKnown RBP37.18■■■■□ 3.54
VEGFA-211ENST00000476772 KDM6AO15550 1401 aaPredicted RBP37.17■■■■□ 3.54
VEGFA-211ENST00000476772 LRP6O75581 1613 aa37.17■■■■□ 3.54
VEGFA-211ENST00000476772 SHANK3Q9BYB0 1731 aa37.17■■■■□ 3.54
VEGFA-211ENST00000476772 BABAM1Q9NWV8 329 aa37.17■■■■□ 3.54
VEGFA-211ENST00000476772 TEFQ10587 303 aa37.16■■■■□ 3.54
VEGFA-211ENST00000476772 KRT24Q2M2I5 525 aa37.15■■■■□ 3.54
VEGFA-211ENST00000476772 SSH1Q8WYL5 1049 aa37.15■■■■□ 3.54
VEGFA-211ENST00000476772 DISP2A7MBM2 1401 aa37.15■■■■□ 3.54
VEGFA-211ENST00000476772 PCDH11XQ9BZA7 1347 aa37.14■■■■□ 3.54
VEGFA-211ENST00000476772 PCDH11YQ9BZA8 1340 aa37.14■■■■□ 3.54
VEGFA-211ENST00000476772 SIPA1L3O60292 1781 aaPredicted RBP37.14■■■■□ 3.54
VEGFA-211ENST00000476772 WNK3Q9BYP7 1800 aa37.14■■■■□ 3.54
VEGFA-211ENST00000476772 ZNF428Q96B54 188 aa37.14■■■■□ 3.54
VEGFA-211ENST00000476772 SMC4Q9NTJ3 1288 aa37.14■■■■□ 3.54
VEGFA-211ENST00000476772 KDM3BQ7LBC6 1761 aa37.13■■■■□ 3.53
VEGFA-211ENST00000476772 C20orf194Q5TEA3 1177 aa37.13■■■■□ 3.53
VEGFA-211ENST00000476772 C8orf37Q96NL8 207 aa37.12■■■■□ 3.53
VEGFA-211ENST00000476772 ALDH1L2Q3SY69 923 aa37.12■■■■□ 3.53
VEGFA-211ENST00000476772 FRAT1Q92837 279 aaPredicted RBP37.1■■■■□ 3.53
VEGFA-211ENST00000476772 HSP90AB1P08238 724 aaKnown RBP37.09■■■■□ 3.53
VEGFA-211ENST00000476772 CANXP27824 592 aaKnown RBP37.09■■■■□ 3.53
VEGFA-211ENST00000476772 NGLY1Q96IV0 654 aa37.09■■■■□ 3.53
VEGFA-211ENST00000476772 DCAF5Q96JK2 942 aa37.09■■■■□ 3.53
VEGFA-211ENST00000476772 SPATA31A1Q5TZJ5 1347 aa37.08■■■■□ 3.53
VEGFA-211ENST00000476772 BTBD11A6QL63 1104 aa37.06■■■■□ 3.52
VEGFA-211ENST00000476772 MRC1P22897 1456 aa37.06■■■■□ 3.52
VEGFA-211ENST00000476772 UNC5CLQ8IV45 518 aa37.05■■■■□ 3.52
VEGFA-211ENST00000476772 EXOC6Q8TAG9 804 aa37.05■■■■□ 3.52
VEGFA-211ENST00000476772 SPATA31A5Q5VU36 1347 aa37.04■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms