RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 GDPD2Q9HCC8 539 aa6.72□□□□□ -1.33
NPHP3-207ENST00000476742 TBC1D2BQ9UPU7 963 aa6.72□□□□□ -1.33
NPHP3-207ENST00000476742 ZBBXA8MT70 800 aa6.71□□□□□ -1.34
NPHP3-207ENST00000476742 ABL2P42684 1182 aa6.71□□□□□ -1.34
NPHP3-207ENST00000476742 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
NPHP3-207ENST00000476742 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
NPHP3-207ENST00000476742 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
NPHP3-207ENST00000476742 ZNF330Q9Y3S2 320 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-207ENST00000476742 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
NPHP3-207ENST00000476742 ZNF592Q92610 1267 aa6.7□□□□□ -1.34
NPHP3-207ENST00000476742 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
NPHP3-207ENST00000476742 SEMA6BQ9H3T3 888 aa6.7□□□□□ -1.34
NPHP3-207ENST00000476742 COG6Q9Y2V7 657 aa6.7□□□□□ -1.34
NPHP3-207ENST00000476742 NR1H3Q13133 447 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 WASHC4Q2M389 1173 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
NPHP3-207ENST00000476742 ADAM32Q8TC27 787 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 SLC10A4Q96EP9 437 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
NPHP3-207ENST00000476742 ADH1CP00326 375 aa6.68□□□□□ -1.34
NPHP3-207ENST00000476742 ARID5BQ14865 1188 aa6.68□□□□□ -1.34
NPHP3-207ENST00000476742 FOXD4L6Q3SYB3 417 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-207ENST00000476742 ERFEQ4G0M1 354 aa6.68□□□□□ -1.34
NPHP3-207ENST00000476742 FOXD4L3Q6VB84 417 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-207ENST00000476742 TRMT44Q8IYL2 757 aaKnown RBP6.68□□□□□ -1.34
NPHP3-207ENST00000476742 MPNDQ8N594 471 aa6.68□□□□□ -1.34
NPHP3-207ENST00000476742 C1QTNF2Q9BXJ5 285 aa6.68□□□□□ -1.34
NPHP3-207ENST00000476742 CDV3Q9UKY7 258 aaKnown RBP6.68□□□□□ -1.34
NPHP3-207ENST00000476742 FBXO45P0C2W1 286 aa6.67□□□□□ -1.34
NPHP3-207ENST00000476742 WDR4P57081 412 aaKnown RBP6.67□□□□□ -1.34
NPHP3-207ENST00000476742 MCCD1P59942 119 aaPredicted RBP6.67□□□□□ -1.34
NPHP3-207ENST00000476742 NNTQ13423 1086 aa6.67□□□□□ -1.34
NPHP3-207ENST00000476742 C6orf118Q5T5N4 469 aa6.67□□□□□ -1.34
NPHP3-207ENST00000476742 DZIP3Q86Y13 1208 aaKnown RBP6.67□□□□□ -1.34
NPHP3-207ENST00000476742 POM121Q96HA1 1249 aa6.67□□□□□ -1.34
NPHP3-207ENST00000476742 GPR37L1O60883 481 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 EIF4G2P78344 907 aaKnown RBP eCLIP6.66□□□□□ -1.34
NPHP3-207ENST00000476742 PTSQ03393 145 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 FZD5Q13467 585 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 VASH1Q7L8A9 365 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-207ENST00000476742 CDK15Q96Q40 435 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 KLF16Q9BXK1 252 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-207ENST00000476742 MAP4K5Q9Y4K4 846 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 TLL2Q9Y6L7 1015 aa6.66□□□□□ -1.34
NPHP3-207ENST00000476742 SOS2Q07890 1332 aaPredicted RBP6.66□□□□□ -1.34
NPHP3-207ENST00000476742 IRF5Q13568 498 aa6.65□□□□□ -1.34
NPHP3-207ENST00000476742 NBPF20Q3BBV1 942 aa6.65□□□□□ -1.34
NPHP3-207ENST00000476742 OCSTAMPQ9BR26 566 aa6.65□□□□□ -1.34
NPHP3-207ENST00000476742 PCDHB9Q9Y5E1 797 aa6.65□□□□□ -1.34
NPHP3-207ENST00000476742 A6NJR5 290 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 TXKP42681 527 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 NR5A1Q13285 461 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
NPHP3-207ENST00000476742 SV2AQ7L0J3 742 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 ERICH6Q7L0X2 663 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 VWA5B2Q8N398 1253 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 CLUAP1Q96AJ1 413 aa6.64□□□□□ -1.35
NPHP3-207ENST00000476742 SOX11P35716 441 aa6.63□□□□□ -1.35
NPHP3-207ENST00000476742 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
NPHP3-207ENST00000476742 PROSER2Q86WR7 435 aaPredicted RBP6.63□□□□□ -1.35
NPHP3-207ENST00000476742 CCDC155Q8N6L0 562 aa6.63□□□□□ -1.35
NPHP3-207ENST00000476742 SEMA3FQ13275 785 aa6.62□□□□□ -1.35
NPHP3-207ENST00000476742 NEDD1Q8NHV4 660 aa6.62□□□□□ -1.35
NPHP3-207ENST00000476742 TRIM52Q96A61 297 aa6.62□□□□□ -1.35
NPHP3-207ENST00000476742 KCTD15Q96SI1 283 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-207ENST00000476742 BMP2P12643 396 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 FSHRP23945 695 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 GRM5P41594 1212 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 DHX9Q08211 1270 aaKnown RBP6.61□□□□□ -1.35
NPHP3-207ENST00000476742 RNF20Q5VTR2 975 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 C14orf37Q86TY3 774 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 ZMYND15Q9H091 742 aa6.61□□□□□ -1.35
NPHP3-207ENST00000476742 CCDC125Q86Z20 511 aa6.6□□□□□ -1.35
NPHP3-207ENST00000476742 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
NPHP3-207ENST00000476742 CCDC116Q8IYX3 515 aa6.59□□□□□ -1.35
NPHP3-207ENST00000476742 FNBP4Q8N3X1 1017 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-207ENST00000476742 CDC14CA4D256 554 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
NPHP3-207ENST00000476742 UPP2O95045 317 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 ITGA6P23229 1130 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 RAB15P59190 212 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 INTS6LQ5JSJ4 861 aaKnown RBP6.58□□□□□ -1.36
NPHP3-207ENST00000476742 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 CEP126Q9P2H0 1117 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
NPHP3-207ENST00000476742 ESPNB1AK53 854 aa6.57□□□□□ -1.36
NPHP3-207ENST00000476742 TRAK2O60296 914 aa6.57□□□□□ -1.36
NPHP3-207ENST00000476742 BCRP11274 1271 aa6.57□□□□□ -1.36
NPHP3-207ENST00000476742 SLFNL1Q499Z3 407 aa6.57□□□□□ -1.36
NPHP3-207ENST00000476742 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
NPHP3-207ENST00000476742 NR3C2P08235 984 aa6.56□□□□□ -1.36
NPHP3-207ENST00000476742 COL8A1P27658 744 aa6.56□□□□□ -1.36
NPHP3-207ENST00000476742 PPP1R26Q5T8A7 1209 aaPredicted RBP6.56□□□□□ -1.36
NPHP3-207ENST00000476742 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
NPHP3-207ENST00000476742 SLC35F4A4IF30 521 aa6.55□□□□□ -1.36
NPHP3-207ENST00000476742 POM121CA8CG34 1229 aa6.55□□□□□ -1.36
NPHP3-207ENST00000476742 C1QTNF9BB2RNN3 333 aa6.55□□□□□ -1.36
NPHP3-207ENST00000476742 ZIC2O95409 532 aaPredicted RBP6.55□□□□□ -1.36
NPHP3-207ENST00000476742 RNF135Q8IUD6 432 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms