RNA–Protein interactions for RNA: ENST00000476010.5

SFI1-220, Transcript of SFI1 centrin binding protein, humanhuman

TSL 4

Gene SFI1, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-220ENST00000476010 COL23A1Q86Y22 540 aaPredicted RBP16.44■□□□□ 0.22
SFI1-220ENST00000476010 USP47Q96K76 1375 aa16.42■□□□□ 0.22
SFI1-220ENST00000476010 KIF3CO14782 793 aa16.42■□□□□ 0.22
SFI1-220ENST00000476010 DDX54Q8TDD1 881 aaKnown RBP16.42■□□□□ 0.22
SFI1-220ENST00000476010 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
SFI1-220ENST00000476010 MSH5O43196 834 aa16.41■□□□□ 0.22
SFI1-220ENST00000476010 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
SFI1-220ENST00000476010 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
SFI1-220ENST00000476010 NSD3Q9BZ95 1437 aa16.4■□□□□ 0.22
SFI1-220ENST00000476010 KCNQ4P56696 695 aa16.4■□□□□ 0.22
SFI1-220ENST00000476010 ZNF526Q8TF50 670 aaPredicted RBP16.4■□□□□ 0.22
SFI1-220ENST00000476010 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
SFI1-220ENST00000476010 EDC4Q6P2E9 1401 aaKnown RBP16.39■□□□□ 0.21
SFI1-220ENST00000476010 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
SFI1-220ENST00000476010 IP6K1Q92551 441 aa16.38■□□□□ 0.21
SFI1-220ENST00000476010 WDR90Q96KV7 1748 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 TOMM70O94826 608 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 TRIM26Q12899 539 aaPredicted RBP16.37■□□□□ 0.21
SFI1-220ENST00000476010 MSL1Q68DK7 614 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
SFI1-220ENST00000476010 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 CGNL1Q0VF96 1302 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
SFI1-220ENST00000476010 NME9Q86XW9 330 aa16.36■□□□□ 0.21
SFI1-220ENST00000476010 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
SFI1-220ENST00000476010 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
SFI1-220ENST00000476010 MEGF6O75095 1541 aa16.35■□□□□ 0.21
SFI1-220ENST00000476010 TOGARAM1Q9Y4F4 1720 aa16.33■□□□□ 0.21
SFI1-220ENST00000476010 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
SFI1-220ENST00000476010 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
SFI1-220ENST00000476010 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
SFI1-220ENST00000476010 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
SFI1-220ENST00000476010 KIF13BQ9NQT8 1826 aa16.31■□□□□ 0.2
SFI1-220ENST00000476010 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
SFI1-220ENST00000476010 JMYQ8N9B5 988 aa16.31■□□□□ 0.2
SFI1-220ENST00000476010 TERF2IPQ9NYB0 399 aa16.3■□□□□ 0.2
SFI1-220ENST00000476010 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
SFI1-220ENST00000476010 RBM46Q8TBY0 533 aaKnown RBP16.29■□□□□ 0.2
SFI1-220ENST00000476010 AK7Q96M32 723 aa16.29■□□□□ 0.2
SFI1-220ENST00000476010 A0A1W2PP64 1363 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 PCDH11XQ9BZA7 1347 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 PCDH11YQ9BZA8 1340 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 SSFA2P28290 1259 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 HOXC9P31274 260 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
SFI1-220ENST00000476010 KLRG1Q96E93 195 aa16.28■□□□□ 0.2
SFI1-220ENST00000476010 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
SFI1-220ENST00000476010 PRELPP51888 382 aa16.27■□□□□ 0.2
SFI1-220ENST00000476010 LTV1Q96GA3 475 aaPredicted RBP16.27■□□□□ 0.2
SFI1-220ENST00000476010 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
SFI1-220ENST00000476010 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
SFI1-220ENST00000476010 SMG6Q86US8 1419 aaKnown RBP16.27■□□□□ 0.19
SFI1-220ENST00000476010 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
SFI1-220ENST00000476010 FSTL1Q12841 308 aa16.26■□□□□ 0.19
SFI1-220ENST00000476010 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
SFI1-220ENST00000476010 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
SFI1-220ENST00000476010 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
SFI1-220ENST00000476010 C10orf71Q711Q0 1435 aa16.26■□□□□ 0.19
SFI1-220ENST00000476010 RAPGEF4Q8WZA2 1011 aa16.25■□□□□ 0.19
SFI1-220ENST00000476010 ITGB4P16144 1822 aa16.24■□□□□ 0.19
SFI1-220ENST00000476010 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
SFI1-220ENST00000476010 AMPHP49418 695 aa16.24■□□□□ 0.19
SFI1-220ENST00000476010 TGFB2P61812 414 aa16.24■□□□□ 0.19
SFI1-220ENST00000476010 TNS4Q8IZW8 715 aa16.23■□□□□ 0.19
SFI1-220ENST00000476010 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
SFI1-220ENST00000476010 COG3Q96JB2 828 aa16.23■□□□□ 0.19
SFI1-220ENST00000476010 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
SFI1-220ENST00000476010 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
SFI1-220ENST00000476010 TNRC6CQ9HCJ0 1690 aaKnown RBP16.22■□□□□ 0.19
SFI1-220ENST00000476010 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
SFI1-220ENST00000476010 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
SFI1-220ENST00000476010 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
SFI1-220ENST00000476010 TATP17735 454 aaPredicted RBP16.21■□□□□ 0.19
SFI1-220ENST00000476010 SLC12A5Q9H2X9 1139 aa16.21■□□□□ 0.19
SFI1-220ENST00000476010 NMRK2Q9NPI5 230 aa16.21■□□□□ 0.19
SFI1-220ENST00000476010 ARFGEF1Q9Y6D6 1849 aa16.21■□□□□ 0.19
SFI1-220ENST00000476010 PHF14O94880 888 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 NBPF6Q5VWK0 638 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 NBPF4Q96M43 638 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 KIF24Q5T7B8 1368 aa16.2■□□□□ 0.18
SFI1-220ENST00000476010 N4BP2Q86UW6 1770 aaPredicted RBP16.2■□□□□ 0.18
SFI1-220ENST00000476010 KDM2BQ8NHM5 1336 aa16.19■□□□□ 0.18
SFI1-220ENST00000476010 BCS1LQ9Y276 419 aa16.18■□□□□ 0.18
SFI1-220ENST00000476010 CAPN15O75808 1086 aa16.17■□□□□ 0.18
SFI1-220ENST00000476010 MMP10P09238 476 aa16.17■□□□□ 0.18
SFI1-220ENST00000476010 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
SFI1-220ENST00000476010 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
SFI1-220ENST00000476010 INSRP06213 1382 aa16.16■□□□□ 0.18
SFI1-220ENST00000476010 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
SFI1-220ENST00000476010 SIK1P57059 783 aa16.16■□□□□ 0.18
SFI1-220ENST00000476010 CYP27B1O15528 508 aa16.15■□□□□ 0.18
SFI1-220ENST00000476010 NKX1-1Q15270 411 aaPredicted RBP16.15■□□□□ 0.18
SFI1-220ENST00000476010 ARHGAP27Q6ZUM4 889 aa16.15■□□□□ 0.18
SFI1-220ENST00000476010 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
SFI1-220ENST00000476010 LINC00116Q8NCU8 138 aa16.15■□□□□ 0.18
SFI1-220ENST00000476010 NCAPD2Q15021 1401 aa16.14■□□□□ 0.17
SFI1-220ENST00000476010 GNPATO15228 680 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms