RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 EIF4A2Q14240 407 aaKnown RBP20.41■□□□□ 0.86
SNX13-207ENST00000475800 SBF2Q86WG5 1849 aa20.41■□□□□ 0.86
SNX13-207ENST00000475800 NCAPD2Q15021 1401 aa20.4■□□□□ 0.86
SNX13-207ENST00000475800 RALBP1Q15311 655 aa20.4■□□□□ 0.86
SNX13-207ENST00000475800 TNS2Q63HR2 1409 aa20.39■□□□□ 0.85
SNX13-207ENST00000475800 EXOC5O00471 708 aa20.39■□□□□ 0.85
SNX13-207ENST00000475800 RAPGEF4Q8WZA2 1011 aa20.38■□□□□ 0.85
SNX13-207ENST00000475800 CFAP53Q96M91 514 aa20.38■□□□□ 0.85
SNX13-207ENST00000475800 EYA1Q99502 592 aa20.38■□□□□ 0.85
SNX13-207ENST00000475800 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
SNX13-207ENST00000475800 PPP2R1AP30153 589 aa20.37■□□□□ 0.85
SNX13-207ENST00000475800 BCL11BQ9C0K0 894 aaPredicted RBP20.37■□□□□ 0.85
SNX13-207ENST00000475800 ANO8Q9HCE9 1232 aaPredicted RBP20.37■□□□□ 0.85
SNX13-207ENST00000475800 PLEKHG2Q9H7P9 1386 aa20.36■□□□□ 0.85
SNX13-207ENST00000475800 IGSF1Q8N6C5 1336 aa20.36■□□□□ 0.85
SNX13-207ENST00000475800 ACSBG1Q96GR2 724 aa20.36■□□□□ 0.85
SNX13-207ENST00000475800 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
SNX13-207ENST00000475800 TATP17735 454 aaPredicted RBP20.35■□□□□ 0.85
SNX13-207ENST00000475800 IL13P35225 146 aa20.35■□□□□ 0.85
SNX13-207ENST00000475800 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
SNX13-207ENST00000475800 KAT6BQ8WYB5 2073 aa20.34■□□□□ 0.85
SNX13-207ENST00000475800 MEGF6O75095 1541 aa20.34■□□□□ 0.85
SNX13-207ENST00000475800 KCNQ2O43526 872 aa20.34■□□□□ 0.85
SNX13-207ENST00000475800 PDGFDQ9GZP0 370 aaPredicted RBP20.34■□□□□ 0.85
SNX13-207ENST00000475800 COL3A1P02461 1466 aaPredicted RBP20.33■□□□□ 0.85
SNX13-207ENST00000475800 PLSCR1O15162 318 aa20.33■□□□□ 0.85
SNX13-207ENST00000475800 PROM2Q8N271 834 aa20.33■□□□□ 0.85
SNX13-207ENST00000475800 SPON1Q9HCB6 807 aa20.33■□□□□ 0.85
SNX13-207ENST00000475800 BCL9O00512 1426 aa20.32■□□□□ 0.84
SNX13-207ENST00000475800 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
SNX13-207ENST00000475800 ZCRB1Q8TBF4 217 aaKnown RBP20.31■□□□□ 0.84
SNX13-207ENST00000475800 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
SNX13-207ENST00000475800 TXNRD1Q16881 649 aa20.3■□□□□ 0.84
SNX13-207ENST00000475800 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
SNX13-207ENST00000475800 SHANK3Q9BYB0 1731 aa20.3■□□□□ 0.84
SNX13-207ENST00000475800 MYBBP1AQ9BQG0 1328 aaKnown RBP20.29■□□□□ 0.84
SNX13-207ENST00000475800 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.845e-6■■■■□ 22.9
SNX13-207ENST00000475800 KDRP35968 1356 aa20.29■□□□□ 0.84
SNX13-207ENST00000475800 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
SNX13-207ENST00000475800 ATF5Q9Y2D1 282 aaPredicted RBP20.28■□□□□ 0.84
SNX13-207ENST00000475800 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
SNX13-207ENST00000475800 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
SNX13-207ENST00000475800 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.84
SNX13-207ENST00000475800 SPG7Q9UQ90 795 aa20.27■□□□□ 0.84
SNX13-207ENST00000475800 STK32BQ9NY57 414 aa20.26■□□□□ 0.83
SNX13-207ENST00000475800 RGPD3A6NKT7 1758 aaPredicted RBP20.26■□□□□ 0.83
SNX13-207ENST00000475800 RGPD4Q7Z3J3 1758 aa20.26■□□□□ 0.83
SNX13-207ENST00000475800 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
SNX13-207ENST00000475800 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
SNX13-207ENST00000475800 AMOTQ4VCS5 1084 aa20.24■□□□□ 0.83
SNX13-207ENST00000475800 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
SNX13-207ENST00000475800 AEBP1Q8IUX7 1158 aa20.23■□□□□ 0.83
SNX13-207ENST00000475800 SLC15A2Q16348 729 aa20.22■□□□□ 0.83
SNX13-207ENST00000475800 CASZ1Q86V15 1759 aa20.21■□□□□ 0.83
SNX13-207ENST00000475800 ANP32CO43423 234 aa20.21■□□□□ 0.83
SNX13-207ENST00000475800 NHSQ6T4R5 1651 aa20.21■□□□□ 0.83
SNX13-207ENST00000475800 HMOX1P09601 288 aa20.2■□□□□ 0.82
SNX13-207ENST00000475800 YY1P25490 414 aa20.2■□□□□ 0.82
SNX13-207ENST00000475800 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
SNX13-207ENST00000475800 DCAF8L1A6NGE4 600 aa20.19■□□□□ 0.82
SNX13-207ENST00000475800 IFNL2Q8IZJ0 200 aa20.19■□□□□ 0.82
SNX13-207ENST00000475800 BTAF1O14981 1849 aa20.18■□□□□ 0.82
SNX13-207ENST00000475800 CYP27B1O15528 508 aa20.18■□□□□ 0.82
SNX13-207ENST00000475800 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
SNX13-207ENST00000475800 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNX13-207ENST00000475800 DOT1LQ8TEK3 1739 aa20.18■□□□□ 0.82
SNX13-207ENST00000475800 FCHSD2O94868 740 aa20.17■□□□□ 0.82
SNX13-207ENST00000475800 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
SNX13-207ENST00000475800 KCNQ4P56696 695 aa20.17■□□□□ 0.82
SNX13-207ENST00000475800 NKX1-1Q15270 411 aaPredicted RBP20.17■□□□□ 0.82
SNX13-207ENST00000475800 PHKG2P15735 406 aa20.16■□□□□ 0.82
SNX13-207ENST00000475800 PTGER2P43116 358 aa20.16■□□□□ 0.82
SNX13-207ENST00000475800 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
SNX13-207ENST00000475800 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
SNX13-207ENST00000475800 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
SNX13-207ENST00000475800 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SNX13-207ENST00000475800 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
SNX13-207ENST00000475800 LRRC4BQ9NT99 713 aa20.14■□□□□ 0.81
SNX13-207ENST00000475800 FHDC1Q9C0D6 1143 aaPredicted RBP20.13■□□□□ 0.81
SNX13-207ENST00000475800 ITGB4P16144 1822 aa20.13■□□□□ 0.81
SNX13-207ENST00000475800 NEFMP07197 916 aa20.12■□□□□ 0.81
SNX13-207ENST00000475800 PRKAR2BP31323 418 aa20.12■□□□□ 0.81
SNX13-207ENST00000475800 PRIM1P49642 420 aaKnown RBP20.12■□□□□ 0.81
SNX13-207ENST00000475800 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
SNX13-207ENST00000475800 MTFR1LQ9H019 292 aa20.12■□□□□ 0.81
SNX13-207ENST00000475800 TOGARAM1Q9Y4F4 1720 aa20.11■□□□□ 0.81
SNX13-207ENST00000475800 AKAP4Q5JQC9 854 aa20.11■□□□□ 0.81
SNX13-207ENST00000475800 KLHL34Q8N239 644 aa20.11■□□□□ 0.81
SNX13-207ENST00000475800 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
SNX13-207ENST00000475800 VIRMAQ69YN4 1812 aaKnown RBP20.11■□□□□ 0.81
SNX13-207ENST00000475800 WDR43Q15061 677 aaKnown RBP eCLIP20.1■□□□□ 0.81
SNX13-207ENST00000475800 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
SNX13-207ENST00000475800 MTHFSDQ2M296 383 aaKnown RBP20.09■□□□□ 0.81
SNX13-207ENST00000475800 SYT17Q9BSW7 474 aa20.08■□□□□ 0.81
SNX13-207ENST00000475800 PAPPAQ13219 1627 aa20.07■□□□□ 0.8
SNX13-207ENST00000475800 ERVV-2B6SEH9 535 aa20.07■□□□□ 0.8
SNX13-207ENST00000475800 ARXQ96QS3 562 aa20.06■□□□□ 0.8
SNX13-207ENST00000475800 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
SNX13-207ENST00000475800 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
SNX13-207ENST00000475800 TFCP2L1Q9NZI6 479 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms