RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 TRMT44Q8IYL2 757 aaKnown RBP9.26□□□□□ -0.93
TOP2B-206ENST00000475717 RNF135Q8IUD6 432 aa9.25□□□□□ -0.93
TOP2B-206ENST00000475717 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
TOP2B-206ENST00000475717 ITPKCQ96DU7 683 aa9.25□□□□□ -0.93
TOP2B-206ENST00000475717 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
TOP2B-206ENST00000475717 MRPL14Q6P1L8 145 aaKnown RBP9.24□□□□□ -0.93
TOP2B-206ENST00000475717 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
TOP2B-206ENST00000475717 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
TOP2B-206ENST00000475717 MAP4K5Q9Y4K4 846 aa9.24□□□□□ -0.93
TOP2B-206ENST00000475717 NCOA4Q13772 614 aa9.23□□□□□ -0.93
TOP2B-206ENST00000475717 SCARF1Q14162 830 aa9.23□□□□□ -0.93
TOP2B-206ENST00000475717 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
TOP2B-206ENST00000475717 ZFP42Q96MM3 310 aa9.23□□□□□ -0.93
TOP2B-206ENST00000475717 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
TOP2B-206ENST00000475717 KLF16Q9BXK1 252 aaPredicted RBP9.23□□□□□ -0.93
TOP2B-206ENST00000475717 ZMIZ1Q9ULJ6 1067 aa9.23□□□□□ -0.93
TOP2B-206ENST00000475717 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
TOP2B-206ENST00000475717 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
TOP2B-206ENST00000475717 CCDC116Q8IYX3 515 aa9.22□□□□□ -0.93
TOP2B-206ENST00000475717 MKRN1Q9UHC7 482 aaKnown RBP9.22□□□□□ -0.93
TOP2B-206ENST00000475717 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
TOP2B-206ENST00000475717 NOVA2Q9UNW9 492 aaKnown RBP9.22□□□□□ -0.93
TOP2B-206ENST00000475717 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 TMEM164Q5U3C3 297 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
TOP2B-206ENST00000475717 STK32AQ8WU08 396 aa9.21□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L21D6R901 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
TOP2B-206ENST00000475717 WFS1O76024 890 aa9.19□□□□□ -0.94
TOP2B-206ENST00000475717 EML3Q32P44 896 aa9.19□□□□□ -0.94
TOP2B-206ENST00000475717 CRTC2Q53ET0 693 aaPredicted RBP9.19□□□□□ -0.94
TOP2B-206ENST00000475717 B4GALNT3Q6L9W6 998 aa9.19□□□□□ -0.94
TOP2B-206ENST00000475717 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
TOP2B-206ENST00000475717 RASA1P20936 1047 aa9.18□□□□□ -0.94
TOP2B-206ENST00000475717 RAB15P59190 212 aa9.18□□□□□ -0.94
TOP2B-206ENST00000475717 PTK7Q13308 1070 aa9.18□□□□□ -0.94
TOP2B-206ENST00000475717 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
TOP2B-206ENST00000475717 CDV3Q9UKY7 258 aaKnown RBP9.18□□□□□ -0.94
TOP2B-206ENST00000475717 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
TOP2B-206ENST00000475717 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
TOP2B-206ENST00000475717 UPP2O95045 317 aa9.17□□□□□ -0.94
TOP2B-206ENST00000475717 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
TOP2B-206ENST00000475717 MEIOBQ8N635 442 aa9.17□□□□□ -0.94
TOP2B-206ENST00000475717 TERTO14746 1132 aaKnown RBP9.16□□□□□ -0.94
TOP2B-206ENST00000475717 BMP2P12643 396 aa9.16□□□□□ -0.94
TOP2B-206ENST00000475717 NFX1Q12986 1120 aaKnown RBP9.16□□□□□ -0.94
TOP2B-206ENST00000475717 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
TOP2B-206ENST00000475717 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
TOP2B-206ENST00000475717 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
TOP2B-206ENST00000475717 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
TOP2B-206ENST00000475717 IVNS1ABPQ9Y6Y0 642 aa9.16□□□□□ -0.94
TOP2B-206ENST00000475717 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
TOP2B-206ENST00000475717 TSGA10IPQ3SY00 556 aa9.15□□□□□ -0.94
TOP2B-206ENST00000475717 INTS6LQ5JSJ4 861 aaKnown RBP9.15□□□□□ -0.94
TOP2B-206ENST00000475717 TRIM50Q86XT4 487 aa9.15□□□□□ -0.94
TOP2B-206ENST00000475717 CCDC85AQ96PX6 553 aaPredicted RBP9.15□□□□□ -0.94
TOP2B-206ENST00000475717 NOD1Q9Y239 953 aa9.15□□□□□ -0.94
TOP2B-206ENST00000475717 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
TOP2B-206ENST00000475717 VEGFBP49765 207 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 ATP1A2P50993 1020 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 MFAP1P55081 439 aaKnown RBP9.14□□□□□ -0.95
TOP2B-206ENST00000475717 CBLBQ13191 982 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 NBPF20Q3BBV1 942 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 ANKMY2Q8IV38 441 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 OGFOD1Q8N543 542 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
TOP2B-206ENST00000475717 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
TOP2B-206ENST00000475717 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
TOP2B-206ENST00000475717 ZNF594Q96JF6 807 aaPredicted RBP9.13□□□□□ -0.95
TOP2B-206ENST00000475717 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
TOP2B-206ENST00000475717 MAN1A2O60476 641 aa9.12□□□□□ -0.95
TOP2B-206ENST00000475717 CLDN10P78369 228 aa9.12□□□□□ -0.95
TOP2B-206ENST00000475717 OXLD1Q5BKU9 147 aa9.12□□□□□ -0.95
TOP2B-206ENST00000475717 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
TOP2B-206ENST00000475717 NXF1Q9UBU9 619 aaKnown RBP9.12□□□□□ -0.95
TOP2B-206ENST00000475717 GNEQ9Y223 722 aaKnown RBP9.12□□□□□ -0.95
TOP2B-206ENST00000475717 ESPNB1AK53 854 aa9.11□□□□□ -0.95
TOP2B-206ENST00000475717 DPYDQ12882 1025 aa9.11□□□□□ -0.95
TOP2B-206ENST00000475717 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
TOP2B-206ENST00000475717 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
TOP2B-206ENST00000475717 FAM69CQ0P6D2 419 aa9.1□□□□□ -0.95
TOP2B-206ENST00000475717 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
TOP2B-206ENST00000475717 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
TOP2B-206ENST00000475717 LARGE2Q8N3Y3 721 aa9.1□□□□□ -0.95
TOP2B-206ENST00000475717 SLC16A10Q8TF71 515 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms