RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 INSRP06213 1382 aa22.8■■□□□ 1.24
CDK11A-214ENST00000474916 FLT4P35916 1363 aa22.8■■□□□ 1.24
CDK11A-214ENST00000474916 PAPPAQ13219 1627 aa22.8■■□□□ 1.24
CDK11A-214ENST00000474916 YY1P25490 414 aa22.78■■□□□ 1.24
CDK11A-214ENST00000474916 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
CDK11A-214ENST00000474916 ZCRB1Q8TBF4 217 aaKnown RBP22.76■■□□□ 1.23
CDK11A-214ENST00000474916 NSD2O96028 1365 aa22.76■■□□□ 1.23
CDK11A-214ENST00000474916 CGNL1Q0VF96 1302 aa22.75■■□□□ 1.23
CDK11A-214ENST00000474916 KIF24Q5T7B8 1368 aa22.75■■□□□ 1.23
CDK11A-214ENST00000474916 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
CDK11A-214ENST00000474916 PANK3Q9H999 370 aa22.74■■□□□ 1.23
CDK11A-214ENST00000474916 LRRC4BQ9NT99 713 aa22.73■■□□□ 1.23
CDK11A-214ENST00000474916 LY75O60449 1722 aa22.72■■□□□ 1.23
CDK11A-214ENST00000474916 PKD1L3Q7Z443 1732 aa22.72■■□□□ 1.23
CDK11A-214ENST00000474916 TOGARAM1Q9Y4F4 1720 aa22.72■■□□□ 1.23
CDK11A-214ENST00000474916 TNNT2P45379 298 aaPredicted RBP22.72■■□□□ 1.23
CDK11A-214ENST00000474916 PRIM1P49642 420 aaKnown RBP22.72■■□□□ 1.23
CDK11A-214ENST00000474916 TUBGCP6Q96RT7 1819 aa22.71■■□□□ 1.23
CDK11A-214ENST00000474916 SLC15A2Q16348 729 aa22.71■■□□□ 1.23
CDK11A-214ENST00000474916 SYTL4Q96C24 671 aaPredicted RBP22.71■■□□□ 1.23
CDK11A-214ENST00000474916 POLKQ9UBT6 870 aa22.71■■□□□ 1.23
CDK11A-214ENST00000474916 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
CDK11A-214ENST00000474916 KCNQ4P56696 695 aa22.7■■□□□ 1.22
CDK11A-214ENST00000474916 ZNF827Q17R98 1081 aa22.7■■□□□ 1.22
CDK11A-214ENST00000474916 RAPGEF4Q8WZA2 1011 aa22.7■■□□□ 1.22
CDK11A-214ENST00000474916 STK32BQ9NY57 414 aa22.7■■□□□ 1.22
CDK11A-214ENST00000474916 ZBTB7AO95365 584 aa22.69■■□□□ 1.22
CDK11A-214ENST00000474916 SPON1Q9HCB6 807 aa22.69■■□□□ 1.22
CDK11A-214ENST00000474916 WASHC2AQ641Q2 1341 aa22.68■■□□□ 1.22
CDK11A-214ENST00000474916 TATP17735 454 aaPredicted RBP22.68■■□□□ 1.22
CDK11A-214ENST00000474916 ITGB4P16144 1822 aa22.68■■□□□ 1.22
CDK11A-214ENST00000474916 EYA1Q99502 592 aa22.66■■□□□ 1.22
CDK11A-214ENST00000474916 CYP27B1O15528 508 aa22.65■■□□□ 1.22
CDK11A-214ENST00000474916 ATF5Q9Y2D1 282 aaPredicted RBP22.65■■□□□ 1.22
CDK11A-214ENST00000474916 KIF7Q2M1P5 1343 aa22.63■■□□□ 1.21
CDK11A-214ENST00000474916 QSER1Q2KHR3 1735 aa22.63■■□□□ 1.21
CDK11A-214ENST00000474916 PTGER2P43116 358 aa22.63■■□□□ 1.21
CDK11A-214ENST00000474916 EIF4A2Q14240 407 aaKnown RBP22.63■■□□□ 1.21
CDK11A-214ENST00000474916 PCDH11XQ9BZA7 1347 aa22.62■■□□□ 1.21
CDK11A-214ENST00000474916 PCDH11YQ9BZA8 1340 aa22.62■■□□□ 1.21
CDK11A-214ENST00000474916 AKT1S1Q96B36 256 aa22.61■■□□□ 1.21
CDK11A-214ENST00000474916 PPP1R1BQ9UD71 204 aaPredicted RBP22.61■■□□□ 1.21
CDK11A-214ENST00000474916 UTRNP46939 3433 aa22.61■■□□□ 1.21
CDK11A-214ENST00000474916 TAF1LQ8IZX4 1826 aa22.59■■□□□ 1.21
CDK11A-214ENST00000474916 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
CDK11A-214ENST00000474916 SGIP1Q9BQI5 828 aa22.57■■□□□ 1.2
CDK11A-214ENST00000474916 C5P01031 1676 aa22.57■■□□□ 1.2
CDK11A-214ENST00000474916 MPRIPQ6WCQ1 1025 aa22.56■■□□□ 1.2
CDK11A-214ENST00000474916 PNPLA7Q6ZV29 1317 aa22.56■■□□□ 1.2
CDK11A-214ENST00000474916 AMER1Q5JTC6 1135 aaPredicted RBP22.55■■□□□ 1.2
CDK11A-214ENST00000474916 MORC1Q86VD1 984 aa22.55■■□□□ 1.2
CDK11A-214ENST00000474916 MTFR1LQ9H019 292 aa22.55■■□□□ 1.2
CDK11A-214ENST00000474916 CCNL1Q9UK58 526 aaPredicted RBP22.55■■□□□ 1.2
CDK11A-214ENST00000474916 IGSF1Q8N6C5 1336 aa22.55■■□□□ 1.2
CDK11A-214ENST00000474916 COL24A1Q17RW2 1714 aa22.54■■□□□ 1.2
CDK11A-214ENST00000474916 KNSTRNQ9Y448 316 aa22.53■■□□□ 1.2
CDK11A-214ENST00000474916 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
CDK11A-214ENST00000474916 SPG7Q9UQ90 795 aa22.52■■□□□ 1.2
CDK11A-214ENST00000474916 PALLDQ8WX93 1383 aa22.51■■□□□ 1.19
CDK11A-214ENST00000474916 PIGBQ92521 554 aa22.51■■□□□ 1.19
CDK11A-214ENST00000474916 PHKG2P15735 406 aa22.5■■□□□ 1.19
CDK11A-214ENST00000474916 AEBP1Q8IUX7 1158 aa22.5■■□□□ 1.19
CDK11A-214ENST00000474916 TFCP2L1Q9NZI6 479 aa22.5■■□□□ 1.19
CDK11A-214ENST00000474916 PER1O15534 1290 aaPredicted RBP22.49■■□□□ 1.19
CDK11A-214ENST00000474916 FHDC1Q9C0D6 1143 aaPredicted RBP22.49■■□□□ 1.19
CDK11A-214ENST00000474916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.49■■□□□ 1.19
CDK11A-214ENST00000474916 CHD4Q14839 1912 aa22.48■■□□□ 1.19
CDK11A-214ENST00000474916 C4BP0C0L5 1744 aa22.48■■□□□ 1.19
CDK11A-214ENST00000474916 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
CDK11A-214ENST00000474916 IFNL2Q8IZJ0 200 aa22.46■■□□□ 1.19
CDK11A-214ENST00000474916 UBR3Q6ZT12 1888 aa22.45■■□□□ 1.19
CDK11A-214ENST00000474916 GOLGB1Q14789 3259 aaKnown RBP22.45■■□□□ 1.18
CDK11A-214ENST00000474916 DCAF8L1A6NGE4 600 aa22.45■■□□□ 1.18
CDK11A-214ENST00000474916 SMIM5Q71RC9 77 aa22.45■■□□□ 1.18
CDK11A-214ENST00000474916 COL23A1Q86Y22 540 aaPredicted RBP22.45■■□□□ 1.18
CDK11A-214ENST00000474916 ARXQ96QS3 562 aa22.45■■□□□ 1.18
CDK11A-214ENST00000474916 SYT17Q9BSW7 474 aa22.45■■□□□ 1.18
CDK11A-214ENST00000474916 IL13P35225 146 aa22.44■■□□□ 1.18
CDK11A-214ENST00000474916 CC2D1BQ5T0F9 858 aaKnown RBP22.44■■□□□ 1.18
CDK11A-214ENST00000474916 ZNF784Q8NCA9 323 aaPredicted RBP22.44■■□□□ 1.18
CDK11A-214ENST00000474916 ASAP1Q9ULH1 1129 aa22.44■■□□□ 1.18
CDK11A-214ENST00000474916 KDM6AO15550 1401 aaPredicted RBP22.43■■□□□ 1.18
CDK11A-214ENST00000474916 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
CDK11A-214ENST00000474916 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
CDK11A-214ENST00000474916 MTHFSP49914 203 aa22.41■■□□□ 1.18
CDK11A-214ENST00000474916 SULT6B1Q6IMI4 303 aa22.41■■□□□ 1.18
CDK11A-214ENST00000474916 SLC16A10Q8TF71 515 aa22.41■■□□□ 1.18
CDK11A-214ENST00000474916 VIRMAQ69YN4 1812 aaKnown RBP22.41■■□□□ 1.18
CDK11A-214ENST00000474916 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
CDK11A-214ENST00000474916 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
CDK11A-214ENST00000474916 ATG3Q9NT62 314 aa22.4■■□□□ 1.18
CDK11A-214ENST00000474916 KDRP35968 1356 aa22.39■■□□□ 1.18
CDK11A-214ENST00000474916 PLEKHG2Q9H7P9 1386 aa22.39■■□□□ 1.18
CDK11A-214ENST00000474916 LOC102724428A0A0B4J2F2 783 aa22.39■■□□□ 1.17
CDK11A-214ENST00000474916 MSH5O43196 834 aa22.39■■□□□ 1.17
CDK11A-214ENST00000474916 SIK1P57059 783 aa22.39■■□□□ 1.17
CDK11A-214ENST00000474916 ITPK1Q13572 414 aa22.39■■□□□ 1.17
CDK11A-214ENST00000474916 MSL1Q68DK7 614 aa22.39■■□□□ 1.17
CDK11A-214ENST00000474916 ZNF530Q6P9A1 599 aaPredicted RBP22.39■■□□□ 1.17
CDK11A-214ENST00000474916 PLEKHO1Q53GL0 409 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms