RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 CARD11Q9BXL7 1154 aa8.46□□□□□ -1.06
CPSF7-210ENST00000474684 ANKRD26Q9UPS8 1709 aa8.46□□□□□ -1.06
CPSF7-210ENST00000474684 IER5LQ5T953 404 aa8.45□□□□□ -1.06
CPSF7-210ENST00000474684 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
CPSF7-210ENST00000474684 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
CPSF7-210ENST00000474684 OVOS2A0A0G2JMS6 1433 aa8.45□□□□□ -1.06
CPSF7-210ENST00000474684 TRIM37O94972 964 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 BAG6P46379 1132 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 SF3B2Q13435 895 aaKnown RBP8.44□□□□□ -1.06
CPSF7-210ENST00000474684 NME9Q86XW9 330 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 TTC21AQ8NDW8 1320 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
CPSF7-210ENST00000474684 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
CPSF7-210ENST00000474684 PAPPAQ13219 1627 aa8.43□□□□□ -1.06
CPSF7-210ENST00000474684 MAP2P11137 1827 aaKnown RBP8.43□□□□□ -1.06
CPSF7-210ENST00000474684 EVA1CP58658 441 aa8.43□□□□□ -1.06
CPSF7-210ENST00000474684 EZH2Q15910 746 aaKnown RBP8.43□□□□□ -1.06
CPSF7-210ENST00000474684 ARHGEF25Q86VW2 580 aa8.43□□□□□ -1.06
CPSF7-210ENST00000474684 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPSF7-210ENST00000474684 TESK2Q96S53 571 aa8.43□□□□□ -1.06
CPSF7-210ENST00000474684 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
CPSF7-210ENST00000474684 PTF1AQ7RTS3 328 aa8.42□□□□□ -1.06
CPSF7-210ENST00000474684 SLC12A5Q9H2X9 1139 aa8.42□□□□□ -1.06
CPSF7-210ENST00000474684 USP47Q96K76 1375 aa8.42□□□□□ -1.06
CPSF7-210ENST00000474684 TOGARAM1Q9Y4F4 1720 aa8.42□□□□□ -1.06
CPSF7-210ENST00000474684 ITGB4P16144 1822 aa8.41□□□□□ -1.06
CPSF7-210ENST00000474684 LY75O60449 1722 aa8.41□□□□□ -1.06
CPSF7-210ENST00000474684 TRIM26Q12899 539 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-210ENST00000474684 FAM196AQ6ZSG2 479 aa8.41□□□□□ -1.06
CPSF7-210ENST00000474684 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
CPSF7-210ENST00000474684 CAMKK2Q96RR4 588 aa8.41□□□□□ -1.06
CPSF7-210ENST00000474684 QSER1Q2KHR3 1735 aa8.4□□□□□ -1.06
CPSF7-210ENST00000474684 ST20-MTHFSA0A0A6YYL1 179 aa8.4□□□□□ -1.06
CPSF7-210ENST00000474684 R3HDM1Q15032 1099 aaKnown RBP8.4□□□□□ -1.06
CPSF7-210ENST00000474684 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
CPSF7-210ENST00000474684 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
CPSF7-210ENST00000474684 THRAP3Q9Y2W1 955 aaKnown RBP8.4□□□□□ -1.06
CPSF7-210ENST00000474684 PKD1L3Q7Z443 1732 aa8.4□□□□□ -1.07
CPSF7-210ENST00000474684 PARD3Q8TEW0 1356 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 ERBB3P21860 1342 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 VIRMAQ69YN4 1812 aaKnown RBP8.39□□□□□ -1.07
CPSF7-210ENST00000474684 TAF1LQ8IZX4 1826 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 MAP3K13O43283 966 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 APBA3O96018 575 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 PDE3BQ13370 1112 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 KCNH5Q8NCM2 988 aa8.39□□□□□ -1.07
CPSF7-210ENST00000474684 CCDC7Q96M83 1385 aa8.38□□□□□ -1.07
CPSF7-210ENST00000474684 DDB1Q16531 1140 aa8.38□□□□□ -1.07
CPSF7-210ENST00000474684 MARCH10Q8NA82 808 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-210ENST00000474684 TMEM121BQ9BXQ6 578 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-210ENST00000474684 ANO8Q9HCE9 1232 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-210ENST00000474684 COLQQ9Y215 455 aaPredicted RBP8.38□□□□□ -1.07
CPSF7-210ENST00000474684 MEGF6O75095 1541 aa8.38□□□□□ -1.07
CPSF7-210ENST00000474684 BCL9O00512 1426 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 ANKRD36BQ8N2N9 1353 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 NINLQ9Y2I6 1382 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 ST18O60284 1047 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 FBLN1P23142 703 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 HDGFL2Q7Z4V5 671 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-210ENST00000474684 SLAIN1Q8ND83 568 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
CPSF7-210ENST00000474684 TRPC6Q9Y210 931 aa8.36□□□□□ -1.07
CPSF7-210ENST00000474684 C5P01031 1676 aa8.36□□□□□ -1.07
CPSF7-210ENST00000474684 MAP3K19Q56UN5 1328 aa8.35□□□□□ -1.07
CPSF7-210ENST00000474684 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
CPSF7-210ENST00000474684 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
CPSF7-210ENST00000474684 TERF2IPQ9NYB0 399 aa8.35□□□□□ -1.07
CPSF7-210ENST00000474684 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
CPSF7-210ENST00000474684 PUS7Q96PZ0 661 aaKnown RBP8.34□□□□□ -1.07
CPSF7-210ENST00000474684 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
CPSF7-210ENST00000474684 TRIM35Q9UPQ4 493 aa8.34□□□□□ -1.07
CPSF7-210ENST00000474684 CHD4Q14839 1912 aa8.34□□□□□ -1.07
CPSF7-210ENST00000474684 SNPHO15079 494 aa8.33□□□□□ -1.08
CPSF7-210ENST00000474684 KCNQ2O43526 872 aa8.33□□□□□ -1.08
CPSF7-210ENST00000474684 PROM2Q8N271 834 aa8.33□□□□□ -1.08
CPSF7-210ENST00000474684 LTV1Q96GA3 475 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-210ENST00000474684 CDCA7Q9BWT1 371 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-210ENST00000474684 PDGFDQ9GZP0 370 aaPredicted RBP8.33□□□□□ -1.08
CPSF7-210ENST00000474684 RTL1A6NKG5 1358 aa8.33□□□□□ -1.08
CPSF7-210ENST00000474684 UBR3Q6ZT12 1888 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 HOXC9P31274 260 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 RRS1Q15050 365 aaKnown RBP8.32□□□□□ -1.08
CPSF7-210ENST00000474684 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 ACSBG1Q96GR2 724 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 GGNBP2Q9H3C7 697 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 NSD2O96028 1365 aa8.32□□□□□ -1.08
CPSF7-210ENST00000474684 IL2RBP14784 551 aa8.31□□□□□ -1.08
CPSF7-210ENST00000474684 TMF1P82094 1093 aa8.31□□□□□ -1.08
CPSF7-210ENST00000474684 IP6K1Q92551 441 aa8.31□□□□□ -1.08
CPSF7-210ENST00000474684 COG3Q96JB2 828 aa8.31□□□□□ -1.08
CPSF7-210ENST00000474684 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
CPSF7-210ENST00000474684 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-210ENST00000474684 FYB1O15117 783 aa8.3□□□□□ -1.08
CPSF7-210ENST00000474684 USHBP1Q8N6Y0 703 aa8.3□□□□□ -1.08
CPSF7-210ENST00000474684 NCAPD2Q15021 1401 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms