RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 PRDM15P57071 1507 aaPredicted RBP7.88□□□□□ -1.15
SMARCE1-208ENST00000474246 ZC3H13Q5T200 1668 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 PNPLA6Q8IY17 1366 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 CCER2I3L3R5 266 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 NRDCO43847 1150 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 E2F4Q16254 413 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 NBPF20Q3BBV1 942 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 SMC5Q8IY18 1101 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 CCER1Q8TC90 406 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 AK7Q96M32 723 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 CRISPLD2Q9H0B8 497 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 A2MP01023 1474 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 RBM47A0AV96 593 aaKnown RBP7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 KIF3CO14782 793 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 PPFIA4O75335 1185 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 PEX14O75381 377 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 TCF3P15923 654 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 TRIM44Q96DX7 344 aaPredicted RBP7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 RPS6KL1Q9Y6S9 549 aa7.87□□□□□ -1.15
SMARCE1-208ENST00000474246 MLH3Q9UHC1 1453 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 MAP3K5Q99683 1374 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 CLTCQ00610 1675 aaKnown RBP7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 LIG1P18858 919 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 ARID4AP29374 1257 aaPredicted RBP7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 CCDC181Q5TID7 509 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 WDR78Q5VTH9 848 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 OCEL1Q9H607 264 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 PLCH2O75038 1416 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 CAMSAP2Q08AD1 1489 aa7.86□□□□□ -1.15
SMARCE1-208ENST00000474246 POTEB2H3BUK9 544 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 MICALL2Q8IY33 904 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 HNRNPMP52272 730 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 ZNF662Q6ZS27 426 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 UBXN4Q92575 508 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 EVI5LQ96CN4 794 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 KIAA1522Q9P206 1035 aaPredicted RBP7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 EP400Q96L91 3159 aa7.85□□□□□ -1.15
SMARCE1-208ENST00000474246 ADGRB2O60241 1585 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 CCDC96Q2M329 555 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 ZFYVE27Q5T4F4 411 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 IER5LQ5T953 404 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 EFCAB2Q5VUJ9 269 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 NKTRP30414 1462 aaKnown RBP7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 GOLGA3Q08378 1498 aa7.84□□□□□ -1.15
SMARCE1-208ENST00000474246 CREB3O43889 395 aa7.84□□□□□ -1.16
SMARCE1-208ENST00000474246 MAP4K4O95819 1239 aaPredicted RBP7.84□□□□□ -1.16
SMARCE1-208ENST00000474246 PLCG2P16885 1265 aa7.84□□□□□ -1.16
SMARCE1-208ENST00000474246 EXOC5O00471 708 aa7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 FOSBP53539 338 aa7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 MFSD10Q14728 455 aa7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 SND1Q7KZF4 910 aaKnown RBP eCLIP7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 HDAC5Q9UQL6 1122 aa7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 BRWD3Q6RI45 1802 aa7.83□□□□□ -1.16
SMARCE1-208ENST00000474246 ABCA6Q8N139 1617 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 SH3BP5O60239 455 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 GIMAP6Q6P9H5 292 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 COLQQ9Y215 455 aaPredicted RBP7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 KDM5AP29375 1690 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 NCOA3Q9Y6Q9 1424 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 MROH1Q8NDA8 1641 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 SEC24BO95487 1268 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 CACTIN-AS1Q8N1I8 211 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 MRRFQ96E11 262 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 METTL14Q9HCE5 456 aaKnown RBP7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 BOLA1Q9Y3E2 137 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 IGF1RP08069 1367 aa7.82□□□□□ -1.16
SMARCE1-208ENST00000474246 PTGER2P43116 358 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 CTCFP49711 727 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 AFAP1Q8N556 730 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 SH3BP1Q9Y3L3 701 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 MYOM1P52179 1685 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 EIF3JO75822 258 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 FSTL1Q12841 308 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 ARHGEF1Q92888 912 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 GPHNQ9NQX3 736 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 NUB1Q9Y5A7 615 aa7.81□□□□□ -1.16
SMARCE1-208ENST00000474246 G3V3G9 751 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 GOLIM4O00461 696 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 ATF3P18847 181 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 SETDB1Q15047 1291 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 CDCA8Q53HL2 280 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 RBM46Q8TBY0 533 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 SNX27Q96L92 541 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 TSPAN18Q96SJ8 248 aa7.8□□□□□ -1.16
SMARCE1-208ENST00000474246 BRINP3Q76B58 766 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 MAF1Q9H063 256 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 PNMA2Q9UL42 364 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 ADCY9O60503 1353 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 ZRANB2O95218 330 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 APPP05067 770 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 HTRA3P83110 453 aa7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
SMARCE1-208ENST00000474246 FAM117AQ9C073 453 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms