RNA–Protein interactions for RNA: ENST00000473414.5

COMMD2-203, Transcript of COMM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD2, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-203ENST00000473414 CCDC136Q96JN2 1154 aa8.72□□□□□ -1.01
COMMD2-203ENST00000473414 ZBTB47Q9UFB7 747 aaPredicted RBP8.72□□□□□ -1.01
COMMD2-203ENST00000473414 ROBO1Q9Y6N7 1651 aa8.72□□□□□ -1.01
COMMD2-203ENST00000473414 TAF7LQ5H9L4 462 aa8.71□□□□□ -1.01
COMMD2-203ENST00000473414 IFNL2Q8IZJ0 200 aa8.71□□□□□ -1.01
COMMD2-203ENST00000473414 A0A1W2PP64 1363 aa8.71□□□□□ -1.01
COMMD2-203ENST00000473414 PDGFDQ9GZP0 370 aaPredicted RBP8.71□□□□□ -1.01
COMMD2-203ENST00000473414 EP400Q96L91 3159 aa8.71□□□□□ -1.02
COMMD2-203ENST00000473414 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
COMMD2-203ENST00000473414 POLKQ9UBT6 870 aa8.71□□□□□ -1.02
COMMD2-203ENST00000473414 RGS17Q9UGC6 210 aaPredicted RBP8.71□□□□□ -1.02
COMMD2-203ENST00000473414 LGR6Q9HBX8 967 aa8.7□□□□□ -1.02
COMMD2-203ENST00000473414 SPHKAPQ2M3C7 1700 aa8.7□□□□□ -1.02
COMMD2-203ENST00000473414 XRN1Q8IZH2 1706 aaKnown RBP8.7□□□□□ -1.02
COMMD2-203ENST00000473414 UPF1Q92900 1129 aaKnown RBP eCLIP8.7□□□□□ -1.02
COMMD2-203ENST00000473414 TXNRD1Q16881 649 aa8.7□□□□□ -1.02
COMMD2-203ENST00000473414 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
COMMD2-203ENST00000473414 PRKRIP1Q9H875 184 aaPredicted RBP8.7□□□□□ -1.02
COMMD2-203ENST00000473414 ARHGEF25Q86VW2 580 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 ARHGAP27Q6ZUM4 889 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 IP6K1Q92551 441 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 TSR2Q969E8 191 aaKnown RBP8.69□□□□□ -1.02
COMMD2-203ENST00000473414 CLEC11AQ9Y240 323 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 NOP58Q9Y2X3 529 aaKnown RBP8.69□□□□□ -1.02
COMMD2-203ENST00000473414 TESK2Q96S53 571 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 STK31Q9BXU1 1019 aa8.69□□□□□ -1.02
COMMD2-203ENST00000473414 RTCBQ9Y3I0 505 aaKnown RBP8.69□□□□□ -1.02
COMMD2-203ENST00000473414 COL16A1Q07092 1604 aaPredicted RBP8.69□□□□□ -1.02
COMMD2-203ENST00000473414 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 OS9Q13438 667 aaPredicted RBP8.68□□□□□ -1.02
COMMD2-203ENST00000473414 NHSL1Q5SYE7 1610 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 E9PCH4 1651 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 MARCH10Q8NA82 808 aaPredicted RBP8.68□□□□□ -1.02
COMMD2-203ENST00000473414 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 SOS2Q07890 1332 aaPredicted RBP8.68□□□□□ -1.02
COMMD2-203ENST00000473414 CCDC7Q96M83 1385 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.68□□□□□ -1.02
COMMD2-203ENST00000473414 SAMD1Q6SPF0 538 aaPredicted RBP8.68□□□□□ -1.02
COMMD2-203ENST00000473414 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
COMMD2-203ENST00000473414 ATP5J2-PTCD1G3V325 749 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 SPON1Q9HCB6 807 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
COMMD2-203ENST00000473414 ISY1Q9ULR0 285 aaKnown RBP8.67□□□□□ -1.02
COMMD2-203ENST00000473414 PTCH1Q13635 1447 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 KIF1BO60333 1816 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 DNAJC10Q8IXB1 793 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 PNPLA6Q8IY17 1366 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 A1BGP04217 495 aa8.67□□□□□ -1.02
COMMD2-203ENST00000473414 PPP2R1AP30153 589 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 FKBP5Q13451 457 aaPredicted RBP8.66□□□□□ -1.02
COMMD2-203ENST00000473414 VPS72Q15906 364 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 SPINK5Q9NQ38 1064 aaPredicted RBP8.66□□□□□ -1.02
COMMD2-203ENST00000473414 FCHSD2O94868 740 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 RBM26Q5T8P6 1007 aaKnown RBP8.66□□□□□ -1.02
COMMD2-203ENST00000473414 STARD3NLO95772 234 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 NCBP3Q53F19 620 aaKnown RBP8.66□□□□□ -1.02
COMMD2-203ENST00000473414 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
COMMD2-203ENST00000473414 PHACTR3Q96KR7 559 aa8.65□□□□□ -1.02
COMMD2-203ENST00000473414 SRP68Q9UHB9 627 aaKnown RBP8.65□□□□□ -1.02
COMMD2-203ENST00000473414 WDR17Q8IZU2 1322 aa8.65□□□□□ -1.02
COMMD2-203ENST00000473414 MTHFSDQ2M296 383 aaKnown RBP8.65□□□□□ -1.02
COMMD2-203ENST00000473414 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
COMMD2-203ENST00000473414 ERBB3P21860 1342 aa8.65□□□□□ -1.03
COMMD2-203ENST00000473414 TECPR2O15040 1411 aa8.65□□□□□ -1.03
COMMD2-203ENST00000473414 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 HDGFL1Q5TGJ6 251 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.64□□□□□ -1.03
COMMD2-203ENST00000473414 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
COMMD2-203ENST00000473414 GAS2L2Q8NHY3 880 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 PARP3Q9Y6F1 533 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 KCNQ3O43525 872 aa8.64□□□□□ -1.03
COMMD2-203ENST00000473414 PNNQ9H307 717 aaKnown RBP8.64□□□□□ -1.03
COMMD2-203ENST00000473414 KNDC1Q76NI1 1749 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 COL22A1Q8NFW1 1626 aaPredicted RBP8.63□□□□□ -1.03
COMMD2-203ENST00000473414 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 KCNJ4P48050 445 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 SIK1P57059 783 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 FTSJ3Q8IY81 847 aaKnown RBP8.63□□□□□ -1.03
COMMD2-203ENST00000473414 CARD10Q9BWT7 1032 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 KIF1AQ12756 1690 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 GJA3Q9Y6H8 435 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 MMP10P09238 476 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 AMER1Q5JTC6 1135 aaPredicted RBP8.63□□□□□ -1.03
COMMD2-203ENST00000473414 JAG2Q9Y219 1238 aa8.63□□□□□ -1.03
COMMD2-203ENST00000473414 MST1RQ04912 1400 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 SPATA31E1Q6ZUB1 1445 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 PCNTO95613 3336 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 KIF6Q6ZMV9 814 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 C16orf71Q8IYS4 520 aaPredicted RBP8.62□□□□□ -1.03
COMMD2-203ENST00000473414 CHMP4CQ96CF2 233 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 SPATA31A1Q5TZJ5 1347 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 PIGBQ92521 554 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 NIP7Q9Y221 180 aaKnown RBP eCLIP8.62□□□□□ -1.03
COMMD2-203ENST00000473414 CDC42BPGQ6DT37 1551 aa8.62□□□□□ -1.03
COMMD2-203ENST00000473414 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms