RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	AMIGO3	Q86WK7	504 aa		13.72	□□□□□ -0.21
MCF2L-223	ENST00000473345	KLHL34	Q8N239	644 aa		13.72	□□□□□ -0.21
MCF2L-223	ENST00000473345	GPR162	Q16538	588 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	SLC27A3	Q5K4L6	730 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	NBPF6	Q5VWK0	638 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	SMIM5	Q71RC9	77 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	COL23A1	Q86Y22	540 aa	Predicted RBP	13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	USHBP1	Q8N6Y0	703 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	SYTL4	Q96C24	671 aa	Predicted RBP	13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	NBPF4	Q96M43	638 aa		13.71	□□□□□ -0.21
MCF2L-223	ENST00000473345	RRS1	Q15050	365 aa	Known RBP	13.7	□□□□□ -0.22
MCF2L-223	ENST00000473345	MSL1	Q68DK7	614 aa		13.69	□□□□□ -0.22
MCF2L-223	ENST00000473345	PELP1	Q8IZL8	1130 aa	Known RBP	13.69	□□□□□ -0.22
MCF2L-223	ENST00000473345	SLC16A10	Q8TF71	515 aa		13.69	□□□□□ -0.22
MCF2L-223	ENST00000473345	TFCP2L1	Q9NZI6	479 aa		13.69	□□□□□ -0.22
MCF2L-223	ENST00000473345	ST20-MTHFS	A0A0A6YYL1	179 aa		13.68	□□□□□ -0.22
MCF2L-223	ENST00000473345	TERF2IP	Q9NYB0	399 aa		13.68	□□□□□ -0.22
MCF2L-223	ENST00000473345	GOLGB1	Q14789	3259 aa	Known RBP	13.68	□□□□□ -0.22
MCF2L-223	ENST00000473345	ZCRB1	Q8TBF4	217 aa	Known RBP	13.67	□□□□□ -0.22
MCF2L-223	ENST00000473345	CCNL1	Q9UK58	526 aa	Predicted RBP	13.67	□□□□□ -0.22
MCF2L-223	ENST00000473345	TOGARAM1	Q9Y4F4	1720 aa		13.67	□□□□□ -0.22
MCF2L-223	ENST00000473345	PUS7	Q96PZ0	661 aa	Known RBP	13.66	□□□□□ -0.22
MCF2L-223	ENST00000473345	KAT6B	Q8WYB5	2073 aa		13.65	□□□□□ -0.22
MCF2L-223	ENST00000473345	FYB1	O15117	783 aa		13.65	□□□□□ -0.22
MCF2L-223	ENST00000473345	POLD1	P28340	1107 aa		13.65	□□□□□ -0.22
MCF2L-223	ENST00000473345	GGNBP2	Q9H3C7	697 aa		13.65	□□□□□ -0.22
MCF2L-223	ENST00000473345	AMPH	P49418	695 aa		13.64	□□□□□ -0.23
MCF2L-223	ENST00000473345	HSP90AB2P	Q58FF8	381 aa		13.64	□□□□□ -0.23
MCF2L-223	ENST00000473345	COG3	Q96JB2	828 aa		13.64	□□□□□ -0.23
MCF2L-223	ENST00000473345	CYP27B1	O15528	508 aa		13.63	□□□□□ -0.23
MCF2L-223	ENST00000473345	C5	P01031	1676 aa		13.63	□□□□□ -0.23
MCF2L-223	ENST00000473345	GIGYF1	O75420	1035 aa	Predicted RBP	13.62	□□□□□ -0.23
MCF2L-223	ENST00000473345	RTL1	A6NKG5	1358 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	ADCY9	O60503	1353 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	USP47	Q96K76	1375 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	MSH5	O43196	834 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	WWC3	Q9ULE0	1092 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	ATP10D	Q9P241	1426 aa		13.61	□□□□□ -0.23
MCF2L-223	ENST00000473345	PALLD	Q8WX93	1383 aa		13.6	□□□□□ -0.23
MCF2L-223	ENST00000473345	TAF1L	Q8IZX4	1826 aa		13.6	□□□□□ -0.23
MCF2L-223	ENST00000473345	CARD14	Q9BXL6	1004 aa		13.6	□□□□□ -0.23
MCF2L-223	ENST00000473345	EMILIN1	Q9Y6C2	1016 aa		13.59	□□□□□ -0.23
MCF2L-223	ENST00000473345	C4B	P0C0L5	1744 aa		13.59	□□□□□ -0.23
MCF2L-223	ENST00000473345	INSR	P06213	1382 aa		13.58	□□□□□ -0.23
MCF2L-223	ENST00000473345	TONSL	Q96HA7	1378 aa		13.58	□□□□□ -0.23
MCF2L-223	ENST00000473345	NCAPD2	Q15021	1401 aa		13.58	□□□□□ -0.24
MCF2L-223	ENST00000473345	MAP2	P11137	1827 aa	Known RBP	13.58	□□□□□ -0.24
MCF2L-223	ENST00000473345	MPRIP	Q6WCQ1	1025 aa		13.58	□□□□□ -0.24
MCF2L-223	ENST00000473345	LINC00116	Q8NCU8	138 aa		13.57	□□□□□ -0.24
MCF2L-223	ENST00000473345	PIGB	Q92521	554 aa		13.57	□□□□□ -0.24
MCF2L-223	ENST00000473345	PKD1L3	Q7Z443	1732 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	ITGB4	P16144	1822 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	TAT	P17735	454 aa	Predicted RBP	13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	ITPK1	Q13572	414 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	RAPGEF4	Q8WZA2	1011 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	UBR3	Q6ZT12	1888 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	CEP350	Q5VT06	3117 aa		13.56	□□□□□ -0.24
MCF2L-223	ENST00000473345	ZNF526	Q8TF50	670 aa	Predicted RBP	13.55	□□□□□ -0.24
MCF2L-223	ENST00000473345	CD2AP	Q9Y5K6	639 aa		13.55	□□□□□ -0.24
MCF2L-223	ENST00000473345	PCDH11X	Q9BZA7	1347 aa		13.55	□□□□□ -0.24
MCF2L-223	ENST00000473345	PCDH11Y	Q9BZA8	1340 aa		13.55	□□□□□ -0.24
MCF2L-223	ENST00000473345	FLT4	P35916	1363 aa		13.55	□□□□□ -0.24
MCF2L-223	ENST00000473345	GRIN3B	O60391	1043 aa		13.54	□□□□□ -0.24
MCF2L-223	ENST00000473345	PHF14	O94880	888 aa		13.54	□□□□□ -0.24
MCF2L-223	ENST00000473345	IFFO2	Q5TF58	517 aa		13.54	□□□□□ -0.24
MCF2L-223	ENST00000473345	CGNL1	Q0VF96	1302 aa		13.54	□□□□□ -0.24
MCF2L-223	ENST00000473345	IGSF1	Q8N6C5	1336 aa		13.54	□□□□□ -0.24
MCF2L-223	ENST00000473345	KIAA1551	Q9HCM1	1747 aa		13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	KIF20B	Q96Q89	1820 aa		13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	NKX1-1	Q15270	411 aa	Predicted RBP	13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	SLC4A9	Q96Q91	983 aa		13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	ASAP1	Q9ULH1	1129 aa		13.53	□□□□□ -0.24
MCF2L-223	ENST00000473345	ANKRD26	Q9UPS8	1709 aa		13.51	□□□□□ -0.25
MCF2L-223	ENST00000473345	SMG6	Q86US8	1419 aa	Known RBP	13.51	□□□□□ -0.25
MCF2L-223	ENST00000473345	NSD3	Q9BZ95	1437 aa		13.51	□□□□□ -0.25
MCF2L-223	ENST00000473345	KIF3C	O14782	793 aa		13.51	□□□□□ -0.25
MCF2L-223	ENST00000473345	EYA1	Q99502	592 aa		13.51	□□□□□ -0.25
MCF2L-223	ENST00000473345	LOC102724428	A0A0B4J2F2	783 aa		13.5	□□□□□ -0.25
MCF2L-223	ENST00000473345	SIK1	P57059	783 aa		13.5	□□□□□ -0.25
MCF2L-223	ENST00000473345	AK7	Q96M32	723 aa		13.5	□□□□□ -0.25
MCF2L-223	ENST00000473345	PXDNL	A1KZ92	1463 aa		13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	KIF24	Q5T7B8	1368 aa		13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	TMF1	P82094	1093 aa		13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	ATG3	Q9NT62	314 aa		13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	CIC	Q96RK0	1608 aa	Predicted RBP	13.49	□□□□□ -0.25
MCF2L-223	ENST00000473345	KDR	P35968	1356 aa		13.48	□□□□□ -0.25
MCF2L-223	ENST00000473345	HSPA6	P17066	643 aa		13.48	□□□□□ -0.25
MCF2L-223	ENST00000473345	FLAD1	Q8NFF5	587 aa		13.48	□□□□□ -0.25
MCF2L-223	ENST00000473345	WASHC2A	Q641Q2	1341 aa		13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	GNPAT	O15228	680 aa		13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	PPM1G	O15355	546 aa	Predicted RBP	13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	PHKG2	P15735	406 aa		13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	SSFA2	P28290	1259 aa		13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	SMARCC1	Q92922	1105 aa	Predicted RBP	13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	POLK	Q9UBT6	870 aa		13.47	□□□□□ -0.25
MCF2L-223	ENST00000473345	MMP10	P09238	476 aa		13.46	□□□□□ -0.25
MCF2L-223	ENST00000473345	EIF4A2	Q14240	407 aa	Known RBP	13.45	□□□□□ -0.26

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