RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PSME1Q06323 249 aa8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 ANKMY2Q8IV38 441 aa8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 LARGE2Q8N3Y3 721 aa8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 FAM200AQ8TCP9 573 aa8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 ZNF594Q96JF6 807 aaPredicted RBP8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 TMPRSS4Q9NRS4 437 aa8.9□□□□□ -0.98
PRPF40A-208ENST00000472760 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-208ENST00000472760 PPP1R26Q5T8A7 1209 aaPredicted RBP8.89□□□□□ -0.99
PRPF40A-208ENST00000472760 CC2D2BQ6DHV5 1058 aa8.89□□□□□ -0.99
PRPF40A-208ENST00000472760 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
PRPF40A-208ENST00000472760 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
PRPF40A-208ENST00000472760 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 SCTRP47872 440 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 MYT1Q01538 1121 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 STK32AQ8WU08 396 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 ZMIZ1Q9ULJ6 1067 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 PCDHGA11Q9Y5H2 935 aa8.88□□□□□ -0.99
PRPF40A-208ENST00000472760 CARNS1A5YM72 827 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 GDF9O60383 454 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 NR3C2P08235 984 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 DPYDQ12882 1025 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 NNTQ13423 1086 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 TMEM164Q5U3C3 297 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 CCDC102BQ68D86 513 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 KIAA1024Q9UPX6 916 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 EMILIN1Q9Y6C2 1016 aa8.87□□□□□ -0.99
PRPF40A-208ENST00000472760 TMEM88BA6NKF7 163 aa8.86□□□□□ -0.99
PRPF40A-208ENST00000472760 SIX5Q8N196 739 aa8.86□□□□□ -0.99
PRPF40A-208ENST00000472760 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
PRPF40A-208ENST00000472760 J3QL48 77 aa8.85□□□□□ -0.99
PRPF40A-208ENST00000472760 SEC13P55735 322 aa8.85□□□□□ -0.99
PRPF40A-208ENST00000472760 AEBP1Q8IUX7 1158 aa8.85□□□□□ -0.99
PRPF40A-208ENST00000472760 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
PRPF40A-208ENST00000472760 OSBPL3Q9H4L5 887 aa8.84□□□□□ -0.99
PRPF40A-208ENST00000472760 LILRA1O75019 489 aa8.83□□□□□ -1
PRPF40A-208ENST00000472760 TOR4AQ9NXH8 423 aa8.83□□□□□ -1
PRPF40A-208ENST00000472760 ZBTB7CA1YPR0 619 aa8.82□□□□□ -1
PRPF40A-208ENST00000472760 SFI1A8K8P3 1242 aa8.82□□□□□ -1
PRPF40A-208ENST00000472760 DKK1O94907 266 aa8.82□□□□□ -1
PRPF40A-208ENST00000472760 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
PRPF40A-208ENST00000472760 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
PRPF40A-208ENST00000472760 CYP2U1Q7Z449 544 aa8.82□□□□□ -1
PRPF40A-208ENST00000472760 RGS20O76081 388 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 BRD1O95696 1058 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 WDR4P57081 412 aaKnown RBP8.81□□□□□ -1
PRPF40A-208ENST00000472760 PRR20EP86478 221 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 PRR20CP86479 221 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 PRR20DP86480 221 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 PRR20BP86481 221 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 PRR20AP86496 221 aa8.81□□□□□ -1
PRPF40A-208ENST00000472760 ZIC2O95409 532 aaPredicted RBP8.8□□□□□ -1
PRPF40A-208ENST00000472760 SMPD1P17405 629 aa8.8□□□□□ -1
PRPF40A-208ENST00000472760 SWI5Q1ZZU3 235 aa8.8□□□□□ -1
PRPF40A-208ENST00000472760 B4GALNT3Q6L9W6 998 aa8.8□□□□□ -1
PRPF40A-208ENST00000472760 TRIM67Q6ZTA4 783 aa8.8□□□□□ -1
PRPF40A-208ENST00000472760 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
PRPF40A-208ENST00000472760 HINFPQ9BQA5 517 aa8.8□□□□□ -1
PRPF40A-208ENST00000472760 GNRH1P01148 92 aa8.79□□□□□ -1
PRPF40A-208ENST00000472760 GDF10P55107 478 aa8.79□□□□□ -1
PRPF40A-208ENST00000472760 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
PRPF40A-208ENST00000472760 ESCO1Q5FWF5 840 aa8.79□□□□□ -1
PRPF40A-208ENST00000472760 CLP1Q92989 425 aaKnown RBP8.79□□□□□ -1
PRPF40A-208ENST00000472760 ITPKCQ96DU7 683 aa8.79□□□□□ -1
PRPF40A-208ENST00000472760 BACH1O14867 736 aa8.78□□□□□ -1
PRPF40A-208ENST00000472760 CBLBQ13191 982 aa8.78□□□□□ -1
PRPF40A-208ENST00000472760 ZNF358Q9NW07 568 aa8.78□□□□□ -1
PRPF40A-208ENST00000472760 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 PATL2C9JE40 543 aaKnown RBP8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 M0R2N6 131 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 STAU1O95793 577 aaKnown RBP8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 ADH1AP07327 375 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 SCNN1DP51172 638 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 TSEN2Q8NCE0 465 aaKnown RBP8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 KLF16Q9BXK1 252 aaPredicted RBP8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
PRPF40A-208ENST00000472760 INHAP05111 366 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 TIMP2P16035 220 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 Q6ZVU0 165 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 HPS1Q92902 700 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 ETNK1Q9HBU6 452 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 ARHGEF10LQ9HCE6 1279 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 RAB6BQ9NRW1 208 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 SERTAD1Q9UHV2 236 aa8.76□□□□□ -1.01
PRPF40A-208ENST00000472760 WASLO00401 505 aaPredicted RBP8.75□□□□□ -1.01
PRPF40A-208ENST00000472760 PRMT3O60678 531 aa8.75□□□□□ -1.01
PRPF40A-208ENST00000472760 LGR5O75473 907 aa8.75□□□□□ -1.01
PRPF40A-208ENST00000472760 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
PRPF40A-208ENST00000472760 KCNA1Q09470 495 aa8.75□□□□□ -1.01
PRPF40A-208ENST00000472760 SSFA2P28290 1259 aa8.74□□□□□ -1.01
PRPF40A-208ENST00000472760 PTGIRP43119 386 aa8.74□□□□□ -1.01
PRPF40A-208ENST00000472760 PRIMPOLQ96LW4 560 aa8.74□□□□□ -1.01
PRPF40A-208ENST00000472760 AGBL1Q96MI9 1066 aa8.74□□□□□ -1.01
PRPF40A-208ENST00000472760 SLAIN2Q9P270 581 aa8.74□□□□□ -1.01
PRPF40A-208ENST00000472760 A0A1W2PRU2 124 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1012.6 ms