RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 AMOTQ4VCS5 1084 aa21.33■■□□□ 1.01
PCOLCE-205ENST00000472348 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
PCOLCE-205ENST00000472348 NGEFQ8N5V2 710 aa21.32■■□□□ 1
PCOLCE-205ENST00000472348 PLEKHF1Q96S99 279 aa21.32■■□□□ 1
PCOLCE-205ENST00000472348 NEFMP07197 916 aa21.31■■□□□ 1
PCOLCE-205ENST00000472348 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
PCOLCE-205ENST00000472348 RUNDC1Q96C34 613 aa21.3■■□□□ 1
PCOLCE-205ENST00000472348 MEGF6O75095 1541 aa21.29■■□□□ 1
PCOLCE-205ENST00000472348 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
PCOLCE-205ENST00000472348 HMOX1P09601 288 aa21.28■■□□□ 1
PCOLCE-205ENST00000472348 PRKAR2BP31323 418 aa21.28■■□□□ 1
PCOLCE-205ENST00000472348 CCDC9Q9Y3X0 531 aaKnown RBP21.28■■□□□ 1
PCOLCE-205ENST00000472348 SHANK3Q9BYB0 1731 aa21.28■■□□□ 1
PCOLCE-205ENST00000472348 LRRC37A3O60309 1634 aa21.28■■□□□ 1
PCOLCE-205ENST00000472348 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
PCOLCE-205ENST00000472348 SPG7Q9UQ90 795 aa21.27■■□□□ 1
PCOLCE-205ENST00000472348 TNS2Q63HR2 1409 aa21.27■■□□□ 1
PCOLCE-205ENST00000472348 USHBP1Q8N6Y0 703 aa21.26■□□□□ 0.99
PCOLCE-205ENST00000472348 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
PCOLCE-205ENST00000472348 DLG5Q8TDM6 1919 aa21.25■□□□□ 0.99
PCOLCE-205ENST00000472348 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
PCOLCE-205ENST00000472348 ADAMTS7Q9UKP4 1686 aa21.24■□□□□ 0.99
PCOLCE-205ENST00000472348 FAM9BQ8IZU0 186 aa21.24■□□□□ 0.99
PCOLCE-205ENST00000472348 EXOC5O00471 708 aa21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 HTATSF1O43719 755 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 ZCRB1Q8TBF4 217 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 USP35Q9P2H5 1018 aa21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 PCDH11XQ9BZA7 1347 aa21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 PCDH11YQ9BZA8 1340 aa21.23■□□□□ 0.99
PCOLCE-205ENST00000472348 BCL9O00512 1426 aa21.22■□□□□ 0.99
PCOLCE-205ENST00000472348 VIRMAQ69YN4 1812 aaKnown RBP21.21■□□□□ 0.99
PCOLCE-205ENST00000472348 DDB1Q16531 1140 aa21.21■□□□□ 0.99
PCOLCE-205ENST00000472348 HSP90AB1P08238 724 aaKnown RBP21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 NKX1-1Q15270 411 aaPredicted RBP21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 NFE2L2Q16236 605 aa21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 FAM98CQ17RN3 349 aaKnown RBP21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 PHACTR3Q96KR7 559 aa21.2■□□□□ 0.98
PCOLCE-205ENST00000472348 SCN11AQ9UI33 1791 aa21.19■□□□□ 0.98
PCOLCE-205ENST00000472348 AKAP4Q5JQC9 854 aa21.19■□□□□ 0.98
PCOLCE-205ENST00000472348 IFNL2Q8IZJ0 200 aa21.19■□□□□ 0.98
PCOLCE-205ENST00000472348 TMPOP42166 694 aaKnown RBP21.18■□□□□ 0.98
PCOLCE-205ENST00000472348 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
PCOLCE-205ENST00000472348 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
PCOLCE-205ENST00000472348 UPF1Q92900 1129 aaKnown RBP eCLIP21.18■□□□□ 0.98
PCOLCE-205ENST00000472348 BRWD3Q6RI45 1802 aa21.18■□□□□ 0.98
PCOLCE-205ENST00000472348 SEPT12Q8IYM1 358 aa21.16■□□□□ 0.98
PCOLCE-205ENST00000472348 MAP3K5Q99683 1374 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 A0A0G2JS52 829 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 GNAT3A8MTJ3 354 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 PHKG2P15735 406 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 MYT1Q01538 1121 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 C1orf141Q5JVX7 400 aa21.15■□□□□ 0.98
PCOLCE-205ENST00000472348 APAF1O14727 1248 aa21.14■□□□□ 0.97
PCOLCE-205ENST00000472348 CYP27B1O15528 508 aa21.14■□□□□ 0.97
PCOLCE-205ENST00000472348 ZNF530Q6P9A1 599 aaPredicted RBP21.14■□□□□ 0.97
PCOLCE-205ENST00000472348 CCDC146Q8IYE0 955 aa21.14■□□□□ 0.97
PCOLCE-205ENST00000472348 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
PCOLCE-205ENST00000472348 PDE3BQ13370 1112 aa21.13■□□□□ 0.97
PCOLCE-205ENST00000472348 CEMIPQ8WUJ3 1361 aa21.12■□□□□ 0.97
PCOLCE-205ENST00000472348 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
PCOLCE-205ENST00000472348 RIPK4P57078 832 aa21.11■□□□□ 0.97
PCOLCE-205ENST00000472348 MRC1P22897 1456 aa21.11■□□□□ 0.97
PCOLCE-205ENST00000472348 RTF1Q92541 710 aaKnown RBP21.1■□□□□ 0.97
PCOLCE-205ENST00000472348 SBF2Q86WG5 1849 aa21.1■□□□□ 0.97
PCOLCE-205ENST00000472348 ERVV-2B6SEH9 535 aa21.09■□□□□ 0.97
PCOLCE-205ENST00000472348 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
PCOLCE-205ENST00000472348 KRT27Q7Z3Y8 459 aa21.09■□□□□ 0.97
PCOLCE-205ENST00000472348 MARCH10Q8NA82 808 aaPredicted RBP21.09■□□□□ 0.97
PCOLCE-205ENST00000472348 ITGB4P16144 1822 aa21.08■□□□□ 0.97
PCOLCE-205ENST00000472348 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.97
PCOLCE-205ENST00000472348 TRIM35Q9UPQ4 493 aa21.08■□□□□ 0.97
PCOLCE-205ENST00000472348 TOGARAM1Q9Y4F4 1720 aa21.07■□□□□ 0.96
PCOLCE-205ENST00000472348 KDM6AO15550 1401 aaPredicted RBP21.07■□□□□ 0.96
PCOLCE-205ENST00000472348 WDR63Q8IWG1 891 aa21.07■□□□□ 0.96
PCOLCE-205ENST00000472348 IL16Q14005 1332 aa21.06■□□□□ 0.96
PCOLCE-205ENST00000472348 ZNF521Q96K83 1311 aa21.06■□□□□ 0.96
PCOLCE-205ENST00000472348 NHSQ6T4R5 1651 aa21.06■□□□□ 0.96
PCOLCE-205ENST00000472348 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
PCOLCE-205ENST00000472348 DOT1LQ8TEK3 1739 aa21.06■□□□□ 0.96
PCOLCE-205ENST00000472348 RNMTO43148 476 aaKnown RBP21.05■□□□□ 0.96
PCOLCE-205ENST00000472348 FAM196AQ6ZSG2 479 aa21.05■□□□□ 0.96
PCOLCE-205ENST00000472348 WWC1Q8IX03 1113 aa21.05■□□□□ 0.96
PCOLCE-205ENST00000472348 ZBED9Q6R2W3 1325 aa21.04■□□□□ 0.96
PCOLCE-205ENST00000472348 IL17REQ8NFR9 667 aa21.04■□□□□ 0.96
PCOLCE-205ENST00000472348 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
PCOLCE-205ENST00000472348 HNRNPUQ00839 825 aaKnown RBP eCLIP21.01■□□□□ 0.95
PCOLCE-205ENST00000472348 MPRIPQ6WCQ1 1025 aa21.01■□□□□ 0.95
PCOLCE-205ENST00000472348 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
PCOLCE-205ENST00000472348 PAPPAQ13219 1627 aa21■□□□□ 0.95
PCOLCE-205ENST00000472348 NEUROD2Q15784 382 aa21■□□□□ 0.95
PCOLCE-205ENST00000472348 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
PCOLCE-205ENST00000472348 KDM3BQ7LBC6 1761 aa21■□□□□ 0.95
PCOLCE-205ENST00000472348 TEFQ10587 303 aa20.99■□□□□ 0.95
PCOLCE-205ENST00000472348 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
PCOLCE-205ENST00000472348 ZNF831Q5JPB2 1677 aa20.99■□□□□ 0.95
PCOLCE-205ENST00000472348 TAF7Q15545 349 aaPredicted RBP20.98■□□□□ 0.95
PCOLCE-205ENST00000472348 CFAP44Q96MT7 982 aa20.98■□□□□ 0.95
PCOLCE-205ENST00000472348 IFT57Q9NWB7 429 aa20.98■□□□□ 0.95
PCOLCE-205ENST00000472348 KAT6BQ8WYB5 2073 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms