RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-205ENST00000472033 TIMP2P16035 220 aa10.5□□□□□ -0.73
ABCA4-205ENST00000472033 CCDC116Q8IYX3 515 aa10.5□□□□□ -0.73
ABCA4-205ENST00000472033 GDPD2Q9HCC8 539 aa10.5□□□□□ -0.73
ABCA4-205ENST00000472033 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
ABCA4-205ENST00000472033 ZIC2O95409 532 aaPredicted RBP10.49□□□□□ -0.73
ABCA4-205ENST00000472033 ABL2P42684 1182 aa10.49□□□□□ -0.73
ABCA4-205ENST00000472033 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
ABCA4-205ENST00000472033 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
ABCA4-205ENST00000472033 TNIKQ9UKE5 1360 aa10.49□□□□□ -0.73
ABCA4-205ENST00000472033 FLIIQ13045 1269 aa10.48□□□□□ -0.73
ABCA4-205ENST00000472033 ITPKCQ96DU7 683 aa10.48□□□□□ -0.73
ABCA4-205ENST00000472033 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
ABCA4-205ENST00000472033 RAB15P59190 212 aa10.47□□□□□ -0.73
ABCA4-205ENST00000472033 INTS6LQ5JSJ4 861 aaKnown RBP10.47□□□□□ -0.73
ABCA4-205ENST00000472033 ZNF787Q6DD87 383 aa10.47□□□□□ -0.73
ABCA4-205ENST00000472033 FAM9AQ8IZU1 332 aaPredicted RBP10.47□□□□□ -0.73
ABCA4-205ENST00000472033 ZFAND3Q9H8U3 227 aa10.47□□□□□ -0.73
ABCA4-205ENST00000472033 POTECB2RU33 542 aa10.46□□□□□ -0.73
ABCA4-205ENST00000472033 BMP1P13497 986 aa10.46□□□□□ -0.73
ABCA4-205ENST00000472033 IRF5Q13568 498 aa10.46□□□□□ -0.73
ABCA4-205ENST00000472033 EMILIN1Q9Y6C2 1016 aa10.46□□□□□ -0.73
ABCA4-205ENST00000472033 PRXQ9BXM0 1461 aa10.46□□□□□ -0.74
ABCA4-205ENST00000472033 DHX9Q08211 1270 aaKnown RBP10.45□□□□□ -0.74
ABCA4-205ENST00000472033 PPP1R26Q5T8A7 1209 aaPredicted RBP10.45□□□□□ -0.74
ABCA4-205ENST00000472033 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
ABCA4-205ENST00000472033 COG6Q9Y2V7 657 aa10.45□□□□□ -0.74
ABCA4-205ENST00000472033 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
ABCA4-205ENST00000472033 EEA1Q15075 1411 aa10.44□□□□□ -0.74
ABCA4-205ENST00000472033 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
ABCA4-205ENST00000472033 ZNF592Q92610 1267 aa10.44□□□□□ -0.74
ABCA4-205ENST00000472033 PGPEP1Q9NXJ5 209 aa10.44□□□□□ -0.74
ABCA4-205ENST00000472033 ESPNB1AK53 854 aa10.43□□□□□ -0.74
ABCA4-205ENST00000472033 UBTFP17480 764 aaKnown RBP10.43□□□□□ -0.74
ABCA4-205ENST00000472033 MCCD1P59942 119 aaPredicted RBP10.43□□□□□ -0.74
ABCA4-205ENST00000472033 TRIM46Q7Z4K8 759 aa10.43□□□□□ -0.74
ABCA4-205ENST00000472033 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
ABCA4-205ENST00000472033 DISP1Q96F81 1524 aa10.43□□□□□ -0.74
ABCA4-205ENST00000472033 GOLGA3Q08378 1498 aa10.42□□□□□ -0.74
ABCA4-205ENST00000472033 VAC14Q08AM6 782 aa10.42□□□□□ -0.74
ABCA4-205ENST00000472033 POM121Q96HA1 1249 aa10.42□□□□□ -0.74
ABCA4-205ENST00000472033 MAPKBP1O60336 1514 aa10.42□□□□□ -0.74
ABCA4-205ENST00000472033 UACAQ9BZF9 1416 aa10.41□□□□□ -0.74
ABCA4-205ENST00000472033 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
ABCA4-205ENST00000472033 RAD21O60216 631 aa10.41□□□□□ -0.74
ABCA4-205ENST00000472033 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
ABCA4-205ENST00000472033 MRPL14Q6P1L8 145 aaKnown RBP10.41□□□□□ -0.74
ABCA4-205ENST00000472033 SENP2Q9HC62 589 aa10.41□□□□□ -0.74
ABCA4-205ENST00000472033 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
ABCA4-205ENST00000472033 ERVH48-1M5A8F1 160 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
ABCA4-205ENST00000472033 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 SEPT12Q8IYM1 358 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 TMPRSS4Q9NRS4 437 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 UHRF1BP1LA0JNW5 1464 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 ABCC10Q5T3U5 1492 aa10.4□□□□□ -0.74
ABCA4-205ENST00000472033 ABCC2Q92887 1545 aa10.39□□□□□ -0.75
ABCA4-205ENST00000472033 SCARF1Q14162 830 aa10.39□□□□□ -0.75
ABCA4-205ENST00000472033 MEIOBQ8N635 442 aa10.39□□□□□ -0.75
ABCA4-205ENST00000472033 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
ABCA4-205ENST00000472033 KIAA0556O60303 1618 aa10.39□□□□□ -0.75
ABCA4-205ENST00000472033 CBLBQ13191 982 aa10.38□□□□□ -0.75
ABCA4-205ENST00000472033 ZNF784Q8NCA9 323 aaPredicted RBP10.38□□□□□ -0.75
ABCA4-205ENST00000472033 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
ABCA4-205ENST00000472033 PURBQ96QR8 312 aaKnown RBP10.38□□□□□ -0.75
ABCA4-205ENST00000472033 KIF13AQ9H1H9 1805 aa10.37□□□□□ -0.75
ABCA4-205ENST00000472033 UPP2O95045 317 aa10.37□□□□□ -0.75
ABCA4-205ENST00000472033 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
ABCA4-205ENST00000472033 WWC1Q8IX03 1113 aa10.37□□□□□ -0.75
ABCA4-205ENST00000472033 ZFP42Q96MM3 310 aa10.37□□□□□ -0.75
ABCA4-205ENST00000472033 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
ABCA4-205ENST00000472033 C6orf118Q5T5N4 469 aa10.36□□□□□ -0.75
ABCA4-205ENST00000472033 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
ABCA4-205ENST00000472033 PLB1Q6P1J6 1458 aa10.36□□□□□ -0.75
ABCA4-205ENST00000472033 Q6ZVU0 165 aa10.35□□□□□ -0.75
ABCA4-205ENST00000472033 CEP126Q9P2H0 1117 aa10.35□□□□□ -0.75
ABCA4-205ENST00000472033 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
ABCA4-205ENST00000472033 BMP2P12643 396 aa10.34□□□□□ -0.75
ABCA4-205ENST00000472033 RANGAP1P46060 587 aaPredicted RBP10.34□□□□□ -0.75
ABCA4-205ENST00000472033 CCDC125Q86Z20 511 aa10.34□□□□□ -0.75
ABCA4-205ENST00000472033 TSEN34Q9BSV6 310 aaKnown RBP10.34□□□□□ -0.75
ABCA4-205ENST00000472033 CYLDQ9NQC7 956 aa10.34□□□□□ -0.75
ABCA4-205ENST00000472033 DIP2BQ9P265 1576 aa10.34□□□□□ -0.75
ABCA4-205ENST00000472033 KDM5BQ9UGL1 1544 aa10.33□□□□□ -0.76
ABCA4-205ENST00000472033 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
ABCA4-205ENST00000472033 PCDHB11Q9Y5F2 797 aa10.33□□□□□ -0.76
ABCA4-205ENST00000472033 LILRA1O75019 489 aa10.32□□□□□ -0.76
ABCA4-205ENST00000472033 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
ABCA4-205ENST00000472033 CLUAP1Q96AJ1 413 aa10.32□□□□□ -0.76
ABCA4-205ENST00000472033 AGBL1Q96MI9 1066 aa10.32□□□□□ -0.76
ABCA4-205ENST00000472033 SOX11P35716 441 aa10.31□□□□□ -0.76
ABCA4-205ENST00000472033 KIF21BO75037 1637 aa10.3□□□□□ -0.76
ABCA4-205ENST00000472033 SLFNL1Q499Z3 407 aa10.3□□□□□ -0.76
ABCA4-205ENST00000472033 ZCCHC11Q5TAX3 1644 aaKnown RBP10.29□□□□□ -0.76
ABCA4-205ENST00000472033 ADH1AP07327 375 aa10.29□□□□□ -0.76
ABCA4-205ENST00000472033 ADD1P35611 737 aaKnown RBP10.29□□□□□ -0.76
ABCA4-205ENST00000472033 RELBQ01201 579 aa10.29□□□□□ -0.76
ABCA4-205ENST00000472033 ABCA8O94911 1581 aa10.29□□□□□ -0.76
ABCA4-205ENST00000472033 GLI2P10070 1586 aa10.29□□□□□ -0.76
ABCA4-205ENST00000472033 TSPOAP1O95153 1857 aa10.29□□□□□ -0.76
ABCA4-205ENST00000472033 ERVK-9P63128 1117 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms