RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 CCNL1Q9UK58 526 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-206ENST00000471968 MAP2K1Q02750 393 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-206ENST00000471968 CARD10Q9BWT7 1032 aa10.18□□□□□ -0.78
HDAC3-206ENST00000471968 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
HDAC3-206ENST00000471968 KAT6BQ8WYB5 2073 aa10.17□□□□□ -0.78
HDAC3-206ENST00000471968 ABCC6O95255 1503 aa10.17□□□□□ -0.78
HDAC3-206ENST00000471968 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-206ENST00000471968 NLRP13Q86W25 1043 aa10.16□□□□□ -0.78
HDAC3-206ENST00000471968 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
HDAC3-206ENST00000471968 SYTL4Q96C24 671 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-206ENST00000471968 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
HDAC3-206ENST00000471968 PPIP5K1Q6PFW1 1433 aa10.16□□□□□ -0.78
HDAC3-206ENST00000471968 COL18A1P39060 1754 aa10.15□□□□□ -0.78
HDAC3-206ENST00000471968 GLTPD2A6NH11 291 aa10.14□□□□□ -0.79
HDAC3-206ENST00000471968 WASLO00401 505 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-206ENST00000471968 TGFB2P61812 414 aa10.14□□□□□ -0.79
HDAC3-206ENST00000471968 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
HDAC3-206ENST00000471968 TSKSQ9UJT2 592 aa10.14□□□□□ -0.79
HDAC3-206ENST00000471968 VIRMAQ69YN4 1812 aaKnown RBP10.14□□□□□ -0.79
HDAC3-206ENST00000471968 N4BP2Q86UW6 1770 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-206ENST00000471968 ERBB3P21860 1342 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 PITPNM2Q9BZ72 1349 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 DPEP1P16444 411 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 DGKZQ13574 1117 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 BEGAINQ9BUH8 593 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 CCDC7Q96M83 1385 aa10.13□□□□□ -0.79
HDAC3-206ENST00000471968 SZT2Q5T011 3432 aa10.12□□□□□ -0.79
HDAC3-206ENST00000471968 SPATA31E1Q6ZUB1 1445 aa10.12□□□□□ -0.79
HDAC3-206ENST00000471968 ACEP12821 1306 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 WDR33Q9C0J8 1336 aaKnown RBP10.11□□□□□ -0.79
HDAC3-206ENST00000471968 KIAA1551Q9HCM1 1747 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 TMEM88BA6NKF7 163 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 POTECB2RU33 542 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 PHF14O94880 888 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
HDAC3-206ENST00000471968 FXR1P51114 621 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC3-206ENST00000471968 RGL3Q3MIN7 710 aa10.11□□□□□ -0.79
HDAC3-206ENST00000471968 LY75O60449 1722 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 QRICH2Q9H0J4 1663 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 POTEIP0CG38 1075 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 DEFB115Q30KQ5 88 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 AMIGO3Q86WK7 504 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
HDAC3-206ENST00000471968 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
HDAC3-206ENST00000471968 PASKQ96RG2 1323 aa10.09□□□□□ -0.79
HDAC3-206ENST00000471968 ZC3H4Q9UPT8 1303 aaKnown RBP10.09□□□□□ -0.79
HDAC3-206ENST00000471968 USP54Q70EL1 1684 aa10.09□□□□□ -0.79
HDAC3-206ENST00000471968 MMP10P09238 476 aa10.09□□□□□ -0.79
HDAC3-206ENST00000471968 NBPF15Q8N660 670 aa10.09□□□□□ -0.79
HDAC3-206ENST00000471968 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
HDAC3-206ENST00000471968 RASSF10A6NK89 507 aa10.08□□□□□ -0.8
HDAC3-206ENST00000471968 IL2RBP14784 551 aa10.08□□□□□ -0.8
HDAC3-206ENST00000471968 RASSF7Q02833 373 aa10.08□□□□□ -0.8
HDAC3-206ENST00000471968 CFAP70Q5T0N1 1121 aa10.08□□□□□ -0.8
HDAC3-206ENST00000471968 DDX54Q8TDD1 881 aaKnown RBP10.08□□□□□ -0.8
HDAC3-206ENST00000471968 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
HDAC3-206ENST00000471968 POLR3AO14802 1390 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-206ENST00000471968 NSD2O96028 1365 aa10.07□□□□□ -0.8
HDAC3-206ENST00000471968 ROCK1Q13464 1354 aa10.07□□□□□ -0.8
HDAC3-206ENST00000471968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.07□□□□□ -0.8
HDAC3-206ENST00000471968 AK7Q96M32 723 aa10.07□□□□□ -0.8
HDAC3-206ENST00000471968 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
HDAC3-206ENST00000471968 ANKRD36BQ8N2N9 1353 aa10.06□□□□□ -0.8
HDAC3-206ENST00000471968 USP47Q96K76 1375 aa10.06□□□□□ -0.8
HDAC3-206ENST00000471968 KCNA3P22001 575 aa10.06□□□□□ -0.8
HDAC3-206ENST00000471968 NLRP6P59044 892 aa10.06□□□□□ -0.8
HDAC3-206ENST00000471968 DALRD3Q5D0E6 543 aaKnown RBP10.06□□□□□ -0.8
HDAC3-206ENST00000471968 PIM2Q9P1W9 311 aa10.06□□□□□ -0.8
HDAC3-206ENST00000471968 KIF13BQ9NQT8 1826 aa10.05□□□□□ -0.8
HDAC3-206ENST00000471968 GRM1Q13255 1194 aa10.05□□□□□ -0.8
HDAC3-206ENST00000471968 TRAK1Q9UPV9 953 aa10.05□□□□□ -0.8
HDAC3-206ENST00000471968 C5P01031 1676 aa10.05□□□□□ -0.8
HDAC3-206ENST00000471968 ARFGEF1Q9Y6D6 1849 aa10.05□□□□□ -0.8
HDAC3-206ENST00000471968 SLIT3O75094 1523 aa10.04□□□□□ -0.8
HDAC3-206ENST00000471968 SOX12O15370 315 aa10.04□□□□□ -0.8
HDAC3-206ENST00000471968 NLRP2Q9NX02 1062 aa10.04□□□□□ -0.8
HDAC3-206ENST00000471968 ABT1Q9ULW3 272 aaKnown RBP10.04□□□□□ -0.8
HDAC3-206ENST00000471968 SBF1O95248 1867 aa10.04□□□□□ -0.8
HDAC3-206ENST00000471968 KDM6AO15550 1401 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-206ENST00000471968 LMNB1P20700 586 aa10.03□□□□□ -0.8
HDAC3-206ENST00000471968 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
HDAC3-206ENST00000471968 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
HDAC3-206ENST00000471968 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
HDAC3-206ENST00000471968 MPNDQ8N594 471 aa10.03□□□□□ -0.8
HDAC3-206ENST00000471968 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
HDAC3-206ENST00000471968 COL6A3P12111 3177 aa10.03□□□□□ -0.8
HDAC3-206ENST00000471968 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
HDAC3-206ENST00000471968 GPR101Q96P66 508 aaPredicted RBP10.02□□□□□ -0.81
HDAC3-206ENST00000471968 CCDC87Q9NVE4 849 aa10.02□□□□□ -0.81
HDAC3-206ENST00000471968 CASP8AP2Q9UKL3 1982 aa10.02□□□□□ -0.81
HDAC3-206ENST00000471968 LTBP1Q14766 1721 aa10.02□□□□□ -0.81
HDAC3-206ENST00000471968 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.81
HDAC3-206ENST00000471968 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
HDAC3-206ENST00000471968 CAPNS2Q96L46 248 aa10.01□□□□□ -0.81
HDAC3-206ENST00000471968 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
HDAC3-206ENST00000471968 NSD3Q9BZ95 1437 aa10□□□□□ -0.81
HDAC3-206ENST00000471968 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms