RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 PKD1L3Q7Z443 1732 aa28.91■■■□□ 2.22
SREBF1-210ENST00000471445 PAPPAQ13219 1627 aa28.91■■■□□ 2.22
SREBF1-210ENST00000471445 PROM2Q8N271 834 aa28.9■■■□□ 2.22
SREBF1-210ENST00000471445 USHBP1Q8N6Y0 703 aa28.9■■■□□ 2.22
SREBF1-210ENST00000471445 PANK3Q9H999 370 aa28.9■■■□□ 2.22
SREBF1-210ENST00000471445 NSD2O96028 1365 aa28.89■■■□□ 2.22
SREBF1-210ENST00000471445 ANO8Q9HCE9 1232 aaPredicted RBP28.89■■■□□ 2.22
SREBF1-210ENST00000471445 DDX54Q8TDD1 881 aaKnown RBP28.88■■■□□ 2.21
SREBF1-210ENST00000471445 TXNRD1Q16881 649 aa28.87■■■□□ 2.21
SREBF1-210ENST00000471445 ZCRB1Q8TBF4 217 aaKnown RBP28.86■■■□□ 2.21
SREBF1-210ENST00000471445 WASHC2AQ641Q2 1341 aa28.86■■■□□ 2.21
SREBF1-210ENST00000471445 RAPGEF4Q8WZA2 1011 aa28.84■■■□□ 2.21
SREBF1-210ENST00000471445 POLKQ9UBT6 870 aa28.84■■■□□ 2.21
SREBF1-210ENST00000471445 LY75O60449 1722 aa28.83■■■□□ 2.21
SREBF1-210ENST00000471445 KIF7Q2M1P5 1343 aa28.82■■■□□ 2.2
SREBF1-210ENST00000471445 PPM1GO15355 546 aaPredicted RBP28.81■■■□□ 2.2
SREBF1-210ENST00000471445 TATP17735 454 aaPredicted RBP28.81■■■□□ 2.2
SREBF1-210ENST00000471445 TOGARAM1Q9Y4F4 1720 aa28.8■■■□□ 2.2
SREBF1-210ENST00000471445 PCDH11XQ9BZA7 1347 aa28.78■■■□□ 2.2
SREBF1-210ENST00000471445 PCDH11YQ9BZA8 1340 aa28.78■■■□□ 2.2
SREBF1-210ENST00000471445 TNNT2P45379 298 aaPredicted RBP28.77■■■□□ 2.2
SREBF1-210ENST00000471445 QSER1Q2KHR3 1735 aa28.76■■■□□ 2.19
SREBF1-210ENST00000471445 STK32BQ9NY57 414 aa28.75■■■□□ 2.19
SREBF1-210ENST00000471445 ITGB4P16144 1822 aa28.75■■■□□ 2.19
SREBF1-210ENST00000471445 PRIM1P49642 420 aaKnown RBP28.74■■■□□ 2.19
SREBF1-210ENST00000471445 EYA1Q99502 592 aa28.74■■■□□ 2.19
SREBF1-210ENST00000471445 SLC15A2Q16348 729 aa28.73■■■□□ 2.19
SREBF1-210ENST00000471445 TUBGCP6Q96RT7 1819 aa28.72■■■□□ 2.19
SREBF1-210ENST00000471445 EIF4A2Q14240 407 aaKnown RBP28.72■■■□□ 2.19
SREBF1-210ENST00000471445 SYTL4Q96C24 671 aaPredicted RBP28.72■■■□□ 2.19
SREBF1-210ENST00000471445 KNSTRNQ9Y448 316 aa28.72■■■□□ 2.19
SREBF1-210ENST00000471445 PLEKHG2Q9H7P9 1386 aa28.71■■■□□ 2.19
SREBF1-210ENST00000471445 CYP27B1O15528 508 aa28.7■■■□□ 2.18
SREBF1-210ENST00000471445 SPON1Q9HCB6 807 aa28.7■■■□□ 2.18
SREBF1-210ENST00000471445 LRRC4BQ9NT99 713 aa28.7■■■□□ 2.18
SREBF1-210ENST00000471445 AMER1Q5JTC6 1135 aaPredicted RBP28.69■■■□□ 2.18
SREBF1-210ENST00000471445 MORC1Q86VD1 984 aa28.69■■■□□ 2.18
SREBF1-210ENST00000471445 PDGFDQ9GZP0 370 aaPredicted RBP28.69■■■□□ 2.18
SREBF1-210ENST00000471445 SLC27A3Q5K4L6 730 aa28.68■■■□□ 2.18
SREBF1-210ENST00000471445 IGSF1Q8N6C5 1336 aa28.68■■■□□ 2.18
SREBF1-210ENST00000471445 ZNF827Q17R98 1081 aa28.65■■■□□ 2.18
SREBF1-210ENST00000471445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.65■■■□□ 2.18
SREBF1-210ENST00000471445 C5P01031 1676 aa28.64■■■□□ 2.18
SREBF1-210ENST00000471445 TAF1LQ8IZX4 1826 aa28.64■■■□□ 2.17
SREBF1-210ENST00000471445 SPG7Q9UQ90 795 aa28.63■■■□□ 2.17
SREBF1-210ENST00000471445 PER1O15534 1290 aaPredicted RBP28.62■■■□□ 2.17
SREBF1-210ENST00000471445 NKX1-1Q15270 411 aaPredicted RBP28.61■■■□□ 2.17
SREBF1-210ENST00000471445 AKT1S1Q96B36 256 aa28.61■■■□□ 2.17
SREBF1-210ENST00000471445 ZBTB7AO95365 584 aa28.6■■■□□ 2.17
SREBF1-210ENST00000471445 COL24A1Q17RW2 1714 aa28.6■■■□□ 2.17
SREBF1-210ENST00000471445 KCNQ4P56696 695 aa28.57■■■□□ 2.16
SREBF1-210ENST00000471445 PPP1R1BQ9UD71 204 aaPredicted RBP28.57■■■□□ 2.16
SREBF1-210ENST00000471445 CCNL1Q9UK58 526 aaPredicted RBP28.57■■■□□ 2.16
SREBF1-210ENST00000471445 PALLDQ8WX93 1383 aa28.57■■■□□ 2.16
SREBF1-210ENST00000471445 PHKG2P15735 406 aa28.56■■■□□ 2.16
SREBF1-210ENST00000471445 PTGER2P43116 358 aa28.56■■■□□ 2.16
SREBF1-210ENST00000471445 MTFR1LQ9H019 292 aa28.56■■■□□ 2.16
SREBF1-210ENST00000471445 NPC1L1Q9UHC9 1359 aa28.56■■■□□ 2.16
SREBF1-210ENST00000471445 MPRIPQ6WCQ1 1025 aa28.55■■■□□ 2.16
SREBF1-210ENST00000471445 IFNL2Q8IZJ0 200 aa28.55■■■□□ 2.16
SREBF1-210ENST00000471445 KDRP35968 1356 aa28.54■■■□□ 2.16
SREBF1-210ENST00000471445 PNPLA7Q6ZV29 1317 aa28.52■■■□□ 2.16
SREBF1-210ENST00000471445 SGIP1Q9BQI5 828 aa28.52■■■□□ 2.16
SREBF1-210ENST00000471445 ATF5Q9Y2D1 282 aaPredicted RBP28.52■■■□□ 2.16
SREBF1-210ENST00000471445 IL13P35225 146 aa28.51■■■□□ 2.15
SREBF1-210ENST00000471445 C4BP0C0L5 1744 aa28.51■■■□□ 2.15
SREBF1-210ENST00000471445 CC2D1BQ5T0F9 858 aaKnown RBP28.5■■■□□ 2.15
SREBF1-210ENST00000471445 AEBP1Q8IUX7 1158 aa28.5■■■□□ 2.15
SREBF1-210ENST00000471445 PIGBQ92521 554 aa28.5■■■□□ 2.15
SREBF1-210ENST00000471445 SMARCC1Q92922 1105 aaPredicted RBP28.49■■■□□ 2.15
SREBF1-210ENST00000471445 KDM6AO15550 1401 aaPredicted RBP28.47■■■□□ 2.15
SREBF1-210ENST00000471445 MTHFSP49914 203 aa28.47■■■□□ 2.15
SREBF1-210ENST00000471445 TFCP2L1Q9NZI6 479 aa28.47■■■□□ 2.15
SREBF1-210ENST00000471445 COL3A1P02461 1466 aaPredicted RBP28.46■■■□□ 2.15
SREBF1-210ENST00000471445 UBR3Q6ZT12 1888 aa28.46■■■□□ 2.15
SREBF1-210ENST00000471445 PLEKHO1Q53GL0 409 aaPredicted RBP28.46■■■□□ 2.15
SREBF1-210ENST00000471445 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
SREBF1-210ENST00000471445 SCN11AQ9UI33 1791 aa28.45■■■□□ 2.15
SREBF1-210ENST00000471445 AMOTQ4VCS5 1084 aa28.45■■■□□ 2.14
SREBF1-210ENST00000471445 SULT6B1Q6IMI4 303 aa28.45■■■□□ 2.14
SREBF1-210ENST00000471445 SLC16A10Q8TF71 515 aa28.45■■■□□ 2.14
SREBF1-210ENST00000471445 VIRMAQ69YN4 1812 aaKnown RBP28.45■■■□□ 2.14
SREBF1-210ENST00000471445 ZNF831Q5JPB2 1677 aa28.45■■■□□ 2.14
SREBF1-210ENST00000471445 HSP90AB1P08238 724 aaKnown RBP28.43■■■□□ 2.14
SREBF1-210ENST00000471445 ZNF530Q6P9A1 599 aaPredicted RBP28.43■■■□□ 2.14
SREBF1-210ENST00000471445 HMGB2P26583 209 aaKnown RBP28.42■■■□□ 2.14
SREBF1-210ENST00000471445 DCAF5Q96JK2 942 aa28.41■■■□□ 2.14
SREBF1-210ENST00000471445 ERVV-2B6SEH9 535 aa28.39■■■□□ 2.14
SREBF1-210ENST00000471445 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.14
SREBF1-210ENST00000471445 MAP3K5Q99683 1374 aa28.38■■■□□ 2.13
SREBF1-210ENST00000471445 COL5A3P25940 1745 aaPredicted RBP28.38■■■□□ 2.13
SREBF1-210ENST00000471445 LOC102724428A0A0B4J2F2 783 aa28.38■■■□□ 2.13
SREBF1-210ENST00000471445 SIK1P57059 783 aa28.38■■■□□ 2.13
SREBF1-210ENST00000471445 ARXQ96QS3 562 aa28.37■■■□□ 2.13
SREBF1-210ENST00000471445 FHDC1Q9C0D6 1143 aaPredicted RBP28.37■■■□□ 2.13
SREBF1-210ENST00000471445 ADAMTS7Q9UKP4 1686 aa28.36■■■□□ 2.13
SREBF1-210ENST00000471445 DIAPH1O60610 1272 aaKnown RBP28.36■■■□□ 2.13
SREBF1-210ENST00000471445 COL23A1Q86Y22 540 aaPredicted RBP28.36■■■□□ 2.13
SREBF1-210ENST00000471445 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
SREBF1-210ENST00000471445 C1orf141Q5JVX7 400 aa28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms