RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RAPGEF4Q8WZA2 1011 aa26.71■■□□□ 1.87
HDAC7-220ENST00000471235 BCL9O00512 1426 aa26.71■■□□□ 1.87
HDAC7-220ENST00000471235 TATP17735 454 aaPredicted RBP26.69■■□□□ 1.86
HDAC7-220ENST00000471235 TOGARAM1Q9Y4F4 1720 aa26.69■■□□□ 1.86
HDAC7-220ENST00000471235 VIRMAQ69YN4 1812 aaKnown RBP26.69■■□□□ 1.86
HDAC7-220ENST00000471235 RGPD3A6NKT7 1758 aaPredicted RBP26.68■■□□□ 1.86
HDAC7-220ENST00000471235 RGPD4Q7Z3J3 1758 aa26.68■■□□□ 1.86
HDAC7-220ENST00000471235 BTAF1O14981 1849 aa26.67■■□□□ 1.86
HDAC7-220ENST00000471235 CCDC125Q86Z20 511 aa26.66■■□□□ 1.86
HDAC7-220ENST00000471235 ZCRB1Q8TBF4 217 aaKnown RBP26.66■■□□□ 1.86
HDAC7-220ENST00000471235 ITGB4P16144 1822 aa26.66■■□□□ 1.86
HDAC7-220ENST00000471235 KDRP35968 1356 aa26.65■■□□□ 1.86
HDAC7-220ENST00000471235 RREB1Q92766 1687 aa26.64■■□□□ 1.86
HDAC7-220ENST00000471235 PLEKHG2Q9H7P9 1386 aa26.64■■□□□ 1.86
HDAC7-220ENST00000471235 DIAPH1O60610 1272 aaKnown RBP26.64■■□□□ 1.86
HDAC7-220ENST00000471235 TRIM37O94972 964 aa26.63■■□□□ 1.85
HDAC7-220ENST00000471235 AEBP1Q8IUX7 1158 aa26.63■■□□□ 1.85
HDAC7-220ENST00000471235 DDX54Q8TDD1 881 aaKnown RBP26.62■■□□□ 1.85
HDAC7-220ENST00000471235 RALBP1Q15311 655 aa26.61■■□□□ 1.85
HDAC7-220ENST00000471235 CFAP53Q96M91 514 aa26.61■■□□□ 1.85
HDAC7-220ENST00000471235 PCDH11XQ9BZA7 1347 aa26.61■■□□□ 1.85
HDAC7-220ENST00000471235 PCDH11YQ9BZA8 1340 aa26.61■■□□□ 1.85
HDAC7-220ENST00000471235 SF3B2Q13435 895 aaKnown RBP26.6■■□□□ 1.85
HDAC7-220ENST00000471235 SULT6B1Q6IMI4 303 aa26.6■■□□□ 1.85
HDAC7-220ENST00000471235 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
HDAC7-220ENST00000471235 DEFB132Q7Z7B7 95 aa26.57■■□□□ 1.84
HDAC7-220ENST00000471235 SCN11AQ9UI33 1791 aa26.56■■□□□ 1.84
HDAC7-220ENST00000471235 CYP27B1O15528 508 aa26.55■■□□□ 1.84
HDAC7-220ENST00000471235 PTF1AQ7RTS3 328 aa26.55■■□□□ 1.84
HDAC7-220ENST00000471235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.55■■□□□ 1.84
HDAC7-220ENST00000471235 SPG7Q9UQ90 795 aa26.55■■□□□ 1.84
HDAC7-220ENST00000471235 MYBBP1AQ9BQG0 1328 aaKnown RBP26.55■■□□□ 1.84
HDAC7-220ENST00000471235 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
HDAC7-220ENST00000471235 HMOX1P09601 288 aa26.54■■□□□ 1.84
HDAC7-220ENST00000471235 BAG6P46379 1132 aa26.54■■□□□ 1.84
HDAC7-220ENST00000471235 ACSBG1Q96GR2 724 aa26.53■■□□□ 1.84
HDAC7-220ENST00000471235 PRKRIP1Q9H875 184 aaPredicted RBP26.53■■□□□ 1.84
HDAC7-220ENST00000471235 LY75O60449 1722 aa26.52■■□□□ 1.84
HDAC7-220ENST00000471235 BCL11BQ9C0K0 894 aaPredicted RBP26.52■■□□□ 1.84
HDAC7-220ENST00000471235 KCNQ2O43526 872 aa26.51■■□□□ 1.83
HDAC7-220ENST00000471235 APBA3O96018 575 aa26.5■■□□□ 1.83
HDAC7-220ENST00000471235 EN1Q05925 392 aaPredicted RBP26.49■■□□□ 1.83
HDAC7-220ENST00000471235 PLEKHO1Q53GL0 409 aaPredicted RBP26.49■■□□□ 1.83
HDAC7-220ENST00000471235 NUDCQ9Y266 331 aa26.49■■□□□ 1.83
HDAC7-220ENST00000471235 ADAMTS7Q9UKP4 1686 aa26.49■■□□□ 1.83
HDAC7-220ENST00000471235 DLG5Q8TDM6 1919 aa26.48■■□□□ 1.83
HDAC7-220ENST00000471235 PHKG2P15735 406 aa26.48■■□□□ 1.83
HDAC7-220ENST00000471235 AMOTQ4VCS5 1084 aa26.47■■□□□ 1.83
HDAC7-220ENST00000471235 ZNF530Q6P9A1 599 aaPredicted RBP26.47■■□□□ 1.83
HDAC7-220ENST00000471235 NKX1-1Q15270 411 aaPredicted RBP26.46■■□□□ 1.83
HDAC7-220ENST00000471235 IFNL2Q8IZJ0 200 aa26.46■■□□□ 1.83
HDAC7-220ENST00000471235 KDM6AO15550 1401 aaPredicted RBP26.45■■□□□ 1.82
HDAC7-220ENST00000471235 U2AF1L5P0DN76 240 aaPredicted RBP26.44■■□□□ 1.82
HDAC7-220ENST00000471235 U2AF1Q01081 240 aaKnown RBP eCLIP26.44■■□□□ 1.82
HDAC7-220ENST00000471235 CAMKK2Q96RR4 588 aa26.44■■□□□ 1.82
HDAC7-220ENST00000471235 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
HDAC7-220ENST00000471235 PRIM1P49642 420 aaKnown RBP26.43■■□□□ 1.82
HDAC7-220ENST00000471235 EZH2Q15910 746 aaKnown RBP26.43■■□□□ 1.82
HDAC7-220ENST00000471235 SYTL4Q96C24 671 aaPredicted RBP26.42■■□□□ 1.82
HDAC7-220ENST00000471235 SIPA1L3O60292 1781 aaPredicted RBP26.41■■□□□ 1.82
HDAC7-220ENST00000471235 PAPPAQ13219 1627 aa26.4■■□□□ 1.82
HDAC7-220ENST00000471235 TAF1LQ8IZX4 1826 aa26.4■■□□□ 1.82
HDAC7-220ENST00000471235 PLSCR1O15162 318 aa26.4■■□□□ 1.82
HDAC7-220ENST00000471235 PRKAR2BP31323 418 aa26.4■■□□□ 1.82
HDAC7-220ENST00000471235 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
HDAC7-220ENST00000471235 MTHFSDQ2M296 383 aaKnown RBP26.38■■□□□ 1.81
HDAC7-220ENST00000471235 MRC1P22897 1456 aa26.37■■□□□ 1.81
HDAC7-220ENST00000471235 HSP90AB1P08238 724 aaKnown RBP26.37■■□□□ 1.81
HDAC7-220ENST00000471235 C5P01031 1676 aa26.36■■□□□ 1.81
HDAC7-220ENST00000471235 FCHSD2O94868 740 aa26.36■■□□□ 1.81
HDAC7-220ENST00000471235 AKAP4Q5JQC9 854 aa26.36■■□□□ 1.81
HDAC7-220ENST00000471235 DCAF5Q96JK2 942 aa26.35■■□□□ 1.81
HDAC7-220ENST00000471235 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
HDAC7-220ENST00000471235 PHACTR3Q96KR7 559 aa26.34■■□□□ 1.81
HDAC7-220ENST00000471235 ANP32CO43423 234 aa26.33■■□□□ 1.81
HDAC7-220ENST00000471235 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.81
HDAC7-220ENST00000471235 MAP3K5Q99683 1374 aa26.33■■□□□ 1.8
HDAC7-220ENST00000471235 GAS2L2Q8NHY3 880 aa26.32■■□□□ 1.8
HDAC7-220ENST00000471235 TXNRD1Q16881 649 aa26.31■■□□□ 1.8
HDAC7-220ENST00000471235 PROM2Q8N271 834 aa26.31■■□□□ 1.8
HDAC7-220ENST00000471235 PIGBQ92521 554 aa26.31■■□□□ 1.8
HDAC7-220ENST00000471235 TMOD3Q9NYL9 352 aa26.31■■□□□ 1.8
HDAC7-220ENST00000471235 ZNF831Q5JPB2 1677 aa26.31■■□□□ 1.8
HDAC7-220ENST00000471235 ERVV-2B6SEH9 535 aa26.3■■□□□ 1.8
HDAC7-220ENST00000471235 QSER1Q2KHR3 1735 aa26.3■■□□□ 1.8
HDAC7-220ENST00000471235 UBR2Q8IWV8 1755 aa26.29■■□□□ 1.8
HDAC7-220ENST00000471235 PALLDQ8WX93 1383 aa26.29■■□□□ 1.8
HDAC7-220ENST00000471235 PLEKHF1Q96S99 279 aa26.28■■□□□ 1.8
HDAC7-220ENST00000471235 COL5A3P25940 1745 aaPredicted RBP26.26■■□□□ 1.79
HDAC7-220ENST00000471235 CICQ96RK0 1608 aaPredicted RBP26.26■■□□□ 1.79
HDAC7-220ENST00000471235 RNMTO43148 476 aaKnown RBP26.26■■□□□ 1.79
HDAC7-220ENST00000471235 CCDC184Q52MB2 194 aa26.26■■□□□ 1.79
HDAC7-220ENST00000471235 LGR6Q9HBX8 967 aa26.26■■□□□ 1.79
HDAC7-220ENST00000471235 GNAT3A8MTJ3 354 aa26.25■■□□□ 1.79
HDAC7-220ENST00000471235 WDR43Q15061 677 aaKnown RBP eCLIP26.25■■□□□ 1.79
HDAC7-220ENST00000471235 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
HDAC7-220ENST00000471235 TJP1Q07157 1748 aa26.25■■□□□ 1.79
HDAC7-220ENST00000471235 CABP4P57796 275 aa26.24■■□□□ 1.79
HDAC7-220ENST00000471235 ANO8Q9HCE9 1232 aaPredicted RBP26.23■■□□□ 1.79
HDAC7-220ENST00000471235 LRRC4BQ9NT99 713 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms