RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 CNGB1Q14028 1251 aaPredicted RBP20.58■□□□□ 0.89
ABCF3-208ENST00000471226 NHSQ6T4R5 1651 aa20.57■□□□□ 0.88
ABCF3-208ENST00000471226 IL13P35225 146 aa20.55■□□□□ 0.88
ABCF3-208ENST00000471226 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
ABCF3-208ENST00000471226 BCL11BQ9C0K0 894 aaPredicted RBP20.55■□□□□ 0.88
ABCF3-208ENST00000471226 APBA3O96018 575 aa20.54■□□□□ 0.88
ABCF3-208ENST00000471226 EN1Q05925 392 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-208ENST00000471226 DDX10Q13206 875 aaKnown RBP20.54■□□□□ 0.88
ABCF3-208ENST00000471226 RGPD3A6NKT7 1758 aaPredicted RBP20.54■□□□□ 0.88
ABCF3-208ENST00000471226 RGPD4Q7Z3J3 1758 aa20.54■□□□□ 0.88
ABCF3-208ENST00000471226 PLEKHG2Q9H7P9 1386 aa20.53■□□□□ 0.88
ABCF3-208ENST00000471226 COL3A1P02461 1466 aaPredicted RBP20.53■□□□□ 0.88
ABCF3-208ENST00000471226 PTF1AQ7RTS3 328 aa20.52■□□□□ 0.88
ABCF3-208ENST00000471226 DOT1LQ8TEK3 1739 aa20.52■□□□□ 0.88
ABCF3-208ENST00000471226 RREB1Q92766 1687 aa20.51■□□□□ 0.87
ABCF3-208ENST00000471226 PPP2R1AP30153 589 aa20.51■□□□□ 0.87
ABCF3-208ENST00000471226 CAMKK2Q96RR4 588 aa20.51■□□□□ 0.87
ABCF3-208ENST00000471226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
ABCF3-208ENST00000471226 PCDH11XQ9BZA7 1347 aa20.51■□□□□ 0.87
ABCF3-208ENST00000471226 PCDH11YQ9BZA8 1340 aa20.51■□□□□ 0.87
ABCF3-208ENST00000471226 BTAF1O14981 1849 aa20.5■□□□□ 0.87
ABCF3-208ENST00000471226 KDRP35968 1356 aa20.5■□□□□ 0.87
ABCF3-208ENST00000471226 PARD3Q8TEW0 1356 aa20.5■□□□□ 0.87
ABCF3-208ENST00000471226 KCNQ2O43526 872 aa20.5■□□□□ 0.87
ABCF3-208ENST00000471226 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
ABCF3-208ENST00000471226 CYP27B1O15528 508 aa20.49■□□□□ 0.87
ABCF3-208ENST00000471226 DIAPH1O60610 1272 aaKnown RBP20.49■□□□□ 0.87
ABCF3-208ENST00000471226 EZH2Q15910 746 aaKnown RBP20.49■□□□□ 0.87
ABCF3-208ENST00000471226 PLSCR1O15162 318 aa20.48■□□□□ 0.87
ABCF3-208ENST00000471226 AEBP1Q8IUX7 1158 aa20.48■□□□□ 0.87
ABCF3-208ENST00000471226 SPG7Q9UQ90 795 aa20.48■□□□□ 0.87
ABCF3-208ENST00000471226 SULT6B1Q6IMI4 303 aa20.47■□□□□ 0.87
ABCF3-208ENST00000471226 ITGB4P16144 1822 aa20.46■□□□□ 0.87
ABCF3-208ENST00000471226 NUP188Q5SRE5 1749 aa20.46■□□□□ 0.87
ABCF3-208ENST00000471226 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
ABCF3-208ENST00000471226 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
ABCF3-208ENST00000471226 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
ABCF3-208ENST00000471226 PRIM1P49642 420 aaKnown RBP20.43■□□□□ 0.86
ABCF3-208ENST00000471226 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
ABCF3-208ENST00000471226 PHKG2P15735 406 aa20.42■□□□□ 0.86
ABCF3-208ENST00000471226 RALBP1Q15311 655 aa20.42■□□□□ 0.86
ABCF3-208ENST00000471226 AMOTQ4VCS5 1084 aa20.42■□□□□ 0.86
ABCF3-208ENST00000471226 PLEKHO1Q53GL0 409 aaPredicted RBP20.42■□□□□ 0.86
ABCF3-208ENST00000471226 IFNL2Q8IZJ0 200 aa20.42■□□□□ 0.86
ABCF3-208ENST00000471226 HMOX1P09601 288 aa20.41■□□□□ 0.86
ABCF3-208ENST00000471226 PROM2Q8N271 834 aa20.41■□□□□ 0.86
ABCF3-208ENST00000471226 LY75O60449 1722 aa20.39■□□□□ 0.86
ABCF3-208ENST00000471226 SYTL4Q96C24 671 aaPredicted RBP20.39■□□□□ 0.85
ABCF3-208ENST00000471226 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.85
ABCF3-208ENST00000471226 U2SURPO15042 1029 aaKnown RBP20.38■□□□□ 0.85
ABCF3-208ENST00000471226 TXNRD1Q16881 649 aa20.37■□□□□ 0.85
ABCF3-208ENST00000471226 ZNF530Q6P9A1 599 aaPredicted RBP20.36■□□□□ 0.85
ABCF3-208ENST00000471226 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
ABCF3-208ENST00000471226 SCN11AQ9UI33 1791 aa20.36■□□□□ 0.85
ABCF3-208ENST00000471226 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
ABCF3-208ENST00000471226 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
ABCF3-208ENST00000471226 DCAF5Q96JK2 942 aa20.33■□□□□ 0.85
ABCF3-208ENST00000471226 KDM6AO15550 1401 aaPredicted RBP20.33■□□□□ 0.84
ABCF3-208ENST00000471226 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
ABCF3-208ENST00000471226 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
ABCF3-208ENST00000471226 NBPF14Q5TI25 921 aa20.32■□□□□ 0.84
ABCF3-208ENST00000471226 RSPH6AQ9H0K4 717 aa20.32■□□□□ 0.84
ABCF3-208ENST00000471226 PRKRIP1Q9H875 184 aaPredicted RBP20.32■□□□□ 0.84
ABCF3-208ENST00000471226 PAPPAQ13219 1627 aa20.31■□□□□ 0.84
ABCF3-208ENST00000471226 ERVV-2B6SEH9 535 aa20.31■□□□□ 0.84
ABCF3-208ENST00000471226 MTHFSDQ2M296 383 aaKnown RBP20.31■□□□□ 0.84
ABCF3-208ENST00000471226 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
ABCF3-208ENST00000471226 PIGBQ92521 554 aa20.31■□□□□ 0.84
ABCF3-208ENST00000471226 ADAMTS7Q9UKP4 1686 aa20.31■□□□□ 0.84
ABCF3-208ENST00000471226 U2AF1L5P0DN76 240 aaPredicted RBP20.3■□□□□ 0.84
ABCF3-208ENST00000471226 U2AF1Q01081 240 aaKnown RBP eCLIP20.3■□□□□ 0.84
ABCF3-208ENST00000471226 PSDA5PKW4 1024 aaPredicted RBP20.29■□□□□ 0.84
ABCF3-208ENST00000471226 FCHSD2O94868 740 aa20.29■□□□□ 0.84
ABCF3-208ENST00000471226 R3HDM1Q15032 1099 aaKnown RBP20.29■□□□□ 0.84
ABCF3-208ENST00000471226 SLC27A3Q5K4L6 730 aa20.29■□□□□ 0.84
ABCF3-208ENST00000471226 LRRC4BQ9NT99 713 aa20.29■□□□□ 0.84
ABCF3-208ENST00000471226 TMOD3Q9NYL9 352 aa20.29■□□□□ 0.84
ABCF3-208ENST00000471226 TAF1LQ8IZX4 1826 aa20.29■□□□□ 0.84
ABCF3-208ENST00000471226 PRKAR2BP31323 418 aa20.28■□□□□ 0.84
ABCF3-208ENST00000471226 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
ABCF3-208ENST00000471226 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
ABCF3-208ENST00000471226 PHACTR3Q96KR7 559 aa20.27■□□□□ 0.84
ABCF3-208ENST00000471226 PALLDQ8WX93 1383 aa20.26■□□□□ 0.83
ABCF3-208ENST00000471226 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
ABCF3-208ENST00000471226 C5P01031 1676 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 RNMTO43148 476 aaKnown RBP20.24■□□□□ 0.83
ABCF3-208ENST00000471226 CABP4P57796 275 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 LGR6Q9HBX8 967 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 ASAP1Q9ULH1 1129 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 QSER1Q2KHR3 1735 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 MRC1P22897 1456 aa20.24■□□□□ 0.83
ABCF3-208ENST00000471226 KCNQ4P56696 695 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 SLC15A2Q16348 729 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 ATG3Q9NT62 314 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 STK32BQ9NY57 414 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
ABCF3-208ENST00000471226 DLG5Q8TDM6 1919 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 CASZ1Q86V15 1759 aa20.23■□□□□ 0.83
ABCF3-208ENST00000471226 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
ABCF3-208ENST00000471226 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms