RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 CGNL1Q0VF96 1302 aa16.28■□□□□ 0.2
HDLBP-232ENST00000470482 LRRC4BQ9NT99 713 aa16.28■□□□□ 0.2
HDLBP-232ENST00000470482 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
HDLBP-232ENST00000470482 PAPPAQ13219 1627 aa16.27■□□□□ 0.2
HDLBP-232ENST00000470482 PANK3Q9H999 370 aa16.27■□□□□ 0.2
HDLBP-232ENST00000470482 BTAF1O14981 1849 aa16.26■□□□□ 0.19
HDLBP-232ENST00000470482 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
HDLBP-232ENST00000470482 SLC15A2Q16348 729 aa16.25■□□□□ 0.19
HDLBP-232ENST00000470482 USHBP1Q8N6Y0 703 aa16.25■□□□□ 0.19
HDLBP-232ENST00000470482 CYP27B1O15528 508 aa16.24■□□□□ 0.19
HDLBP-232ENST00000470482 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
HDLBP-232ENST00000470482 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
HDLBP-232ENST00000470482 AKT1S1Q96B36 256 aa16.23■□□□□ 0.19
HDLBP-232ENST00000470482 EYA1Q99502 592 aa16.23■□□□□ 0.19
HDLBP-232ENST00000470482 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
HDLBP-232ENST00000470482 PTGER2P43116 358 aa16.22■□□□□ 0.19
HDLBP-232ENST00000470482 NKX1-1Q15270 411 aaPredicted RBP16.22■□□□□ 0.19
HDLBP-232ENST00000470482 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
HDLBP-232ENST00000470482 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
HDLBP-232ENST00000470482 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
HDLBP-232ENST00000470482 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
HDLBP-232ENST00000470482 ZNF827Q17R98 1081 aa16.2■□□□□ 0.18
HDLBP-232ENST00000470482 AMER1Q5JTC6 1135 aaPredicted RBP16.2■□□□□ 0.18
HDLBP-232ENST00000470482 SLC27A3Q5K4L6 730 aa16.2■□□□□ 0.18
HDLBP-232ENST00000470482 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
HDLBP-232ENST00000470482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.188e-16■□□□□ 9.6
HDLBP-232ENST00000470482 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
HDLBP-232ENST00000470482 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
HDLBP-232ENST00000470482 EIF4A2Q14240 407 aaKnown RBP16.19■□□□□ 0.18
HDLBP-232ENST00000470482 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
HDLBP-232ENST00000470482 PLEKHG2Q9H7P9 1386 aa16.18■□□□□ 0.18
HDLBP-232ENST00000470482 STK32BQ9NY57 414 aa16.18■□□□□ 0.18
HDLBP-232ENST00000470482 LY75O60449 1722 aa16.18■□□□□ 0.18
HDLBP-232ENST00000470482 DOT1LQ8TEK3 1739 aa16.17■□□□□ 0.18
HDLBP-232ENST00000470482 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
HDLBP-232ENST00000470482 PCDH11XQ9BZA7 1347 aa16.17■□□□□ 0.18
HDLBP-232ENST00000470482 PCDH11YQ9BZA8 1340 aa16.17■□□□□ 0.18
HDLBP-232ENST00000470482 KCNQ4P56696 695 aa16.15■□□□□ 0.18
HDLBP-232ENST00000470482 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
HDLBP-232ENST00000470482 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
HDLBP-232ENST00000470482 PPM1GO15355 546 aaPredicted RBP16.14■□□□□ 0.17
HDLBP-232ENST00000470482 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
HDLBP-232ENST00000470482 QSER1Q2KHR3 1735 aa16.14■□□□□ 0.17
HDLBP-232ENST00000470482 TOGARAM1Q9Y4F4 1720 aa16.14■□□□□ 0.17
HDLBP-232ENST00000470482 TNNT2P45379 298 aaPredicted RBP16.13■□□□□ 0.17
HDLBP-232ENST00000470482 MTFR1LQ9H019 292 aa16.13■□□□□ 0.17
HDLBP-232ENST00000470482 PNPLA7Q6ZV29 1317 aa16.13■□□□□ 0.17
HDLBP-232ENST00000470482 PIGBQ92521 554 aa16.12■□□□□ 0.17
HDLBP-232ENST00000470482 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-232ENST00000470482 PHKG2P15735 406 aa16.11■□□□□ 0.17
HDLBP-232ENST00000470482 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-232ENST00000470482 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
HDLBP-232ENST00000470482 IL13P35225 146 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 SLC16A10Q8TF71 515 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 KDRP35968 1356 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 ITGB4P16144 1822 aa16.1■□□□□ 0.17
HDLBP-232ENST00000470482 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
HDLBP-232ENST00000470482 TUBGCP6Q96RT7 1819 aa16.08■□□□□ 0.17
HDLBP-232ENST00000470482 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
HDLBP-232ENST00000470482 MAP3K5Q99683 1374 aa16.08■□□□□ 0.16
HDLBP-232ENST00000470482 MPRIPQ6WCQ1 1025 aa16.07■□□□□ 0.16
HDLBP-232ENST00000470482 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
HDLBP-232ENST00000470482 SYT17Q9BSW7 474 aa16.07■□□□□ 0.16
HDLBP-232ENST00000470482 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
HDLBP-232ENST00000470482 AMIGO3Q86WK7 504 aa16.06■□□□□ 0.16
HDLBP-232ENST00000470482 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
HDLBP-232ENST00000470482 AEBP1Q8IUX7 1158 aa16.06■□□□□ 0.16
HDLBP-232ENST00000470482 SMARCC1Q92922 1105 aaPredicted RBP16.05■□□□□ 0.16
HDLBP-232ENST00000470482 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
HDLBP-232ENST00000470482 ARXQ96QS3 562 aa16.04■□□□□ 0.16
HDLBP-232ENST00000470482 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-232ENST00000470482 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
HDLBP-232ENST00000470482 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
HDLBP-232ENST00000470482 PPP1R1BQ9UD71 204 aaPredicted RBP16.04■□□□□ 0.16
HDLBP-232ENST00000470482 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
HDLBP-232ENST00000470482 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
HDLBP-232ENST00000470482 UTRNP46939 3433 aa16.03■□□□□ 0.16
HDLBP-232ENST00000470482 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
HDLBP-232ENST00000470482 MTHFSP49914 203 aa16.03■□□□□ 0.16
HDLBP-232ENST00000470482 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
HDLBP-232ENST00000470482 ITPK1Q13572 414 aa16.02■□□□□ 0.16
HDLBP-232ENST00000470482 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.16
HDLBP-232ENST00000470482 DCAF5Q96JK2 942 aa16.02■□□□□ 0.16
HDLBP-232ENST00000470482 C5P01031 1676 aa16.02■□□□□ 0.15
HDLBP-232ENST00000470482 LOC102724428A0A0B4J2F2 783 aa16.01■□□□□ 0.15
HDLBP-232ENST00000470482 SIK1P57059 783 aa16.01■□□□□ 0.15
HDLBP-232ENST00000470482 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
HDLBP-232ENST00000470482 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
HDLBP-232ENST00000470482 SULT6B1Q6IMI4 303 aa16■□□□□ 0.15
HDLBP-232ENST00000470482 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
HDLBP-232ENST00000470482 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
HDLBP-232ENST00000470482 HMGB2P26583 209 aaKnown RBP15.99■□□□□ 0.15
HDLBP-232ENST00000470482 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
HDLBP-232ENST00000470482 ZNF831Q5JPB2 1677 aa15.99■□□□□ 0.15
HDLBP-232ENST00000470482 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
HDLBP-232ENST00000470482 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
HDLBP-232ENST00000470482 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
HDLBP-232ENST00000470482 SMIM5Q71RC9 77 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms