RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
HLA-C-206ENST00000470363 ATF5Q9Y2D1 282 aaPredicted RBP16.01■□□□□ 0.15
HLA-C-206ENST00000470363 BTAF1O14981 1849 aa16.01■□□□□ 0.15
HLA-C-206ENST00000470363 INSRP06213 1382 aa16■□□□□ 0.15
HLA-C-206ENST00000470363 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
HLA-C-206ENST00000470363 MTFR1LQ9H019 292 aa16■□□□□ 0.15
HLA-C-206ENST00000470363 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
HLA-C-206ENST00000470363 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
HLA-C-206ENST00000470363 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
HLA-C-206ENST00000470363 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
HLA-C-206ENST00000470363 USHBP1Q8N6Y0 703 aa15.98■□□□□ 0.15
HLA-C-206ENST00000470363 SHANK3Q9BYB0 1731 aa15.97■□□□□ 0.15
HLA-C-206ENST00000470363 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
HLA-C-206ENST00000470363 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
HLA-C-206ENST00000470363 FLT4P35916 1363 aa15.97■□□□□ 0.15
HLA-C-206ENST00000470363 MYOM1P52179 1685 aa15.96■□□□□ 0.15
HLA-C-206ENST00000470363 NSD3Q9BZ95 1437 aa15.96■□□□□ 0.15
HLA-C-206ENST00000470363 KCNQ4P56696 695 aa15.96■□□□□ 0.15
HLA-C-206ENST00000470363 SYT17Q9BSW7 474 aa15.96■□□□□ 0.15
HLA-C-206ENST00000470363 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
HLA-C-206ENST00000470363 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
HLA-C-206ENST00000470363 FHDC1Q9C0D6 1143 aaPredicted RBP15.95■□□□□ 0.14
HLA-C-206ENST00000470363 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
HLA-C-206ENST00000470363 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
HLA-C-206ENST00000470363 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
HLA-C-206ENST00000470363 PNPLA7Q6ZV29 1317 aa15.94■□□□□ 0.14
HLA-C-206ENST00000470363 CYP27B1O15528 508 aa15.93■□□□□ 0.14
HLA-C-206ENST00000470363 SLC16A10Q8TF71 515 aa15.93■□□□□ 0.14
HLA-C-206ENST00000470363 SMG6Q86US8 1419 aaKnown RBP15.93■□□□□ 0.14
HLA-C-206ENST00000470363 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
HLA-C-206ENST00000470363 TATP17735 454 aaPredicted RBP15.92■□□□□ 0.14
HLA-C-206ENST00000470363 YY1P25490 414 aa15.92■□□□□ 0.14
HLA-C-206ENST00000470363 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
HLA-C-206ENST00000470363 POLKQ9UBT6 870 aa15.92■□□□□ 0.14
HLA-C-206ENST00000470363 GOLGB1Q14789 3259 aaKnown RBP15.92■□□□□ 0.14
HLA-C-206ENST00000470363 KIF20BQ96Q89 1820 aa15.91■□□□□ 0.14
HLA-C-206ENST00000470363 KAT6BQ8WYB5 2073 aa15.91■□□□□ 0.14
HLA-C-206ENST00000470363 ARXQ96QS3 562 aa15.91■□□□□ 0.14
HLA-C-206ENST00000470363 LY75O60449 1722 aa15.91■□□□□ 0.14
HLA-C-206ENST00000470363 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
HLA-C-206ENST00000470363 EYA1Q99502 592 aa15.9■□□□□ 0.14
HLA-C-206ENST00000470363 DOT1LQ8TEK3 1739 aa15.9■□□□□ 0.14
HLA-C-206ENST00000470363 PCDH11XQ9BZA7 1347 aa15.9■□□□□ 0.14
HLA-C-206ENST00000470363 PCDH11YQ9BZA8 1340 aa15.9■□□□□ 0.14
HLA-C-206ENST00000470363 TFCP2L1Q9NZI6 479 aa15.89■□□□□ 0.13
HLA-C-206ENST00000470363 CCNL1Q9UK58 526 aaPredicted RBP15.89■□□□□ 0.13
HLA-C-206ENST00000470363 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
HLA-C-206ENST00000470363 QSER1Q2KHR3 1735 aa15.88■□□□□ 0.13
HLA-C-206ENST00000470363 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
HLA-C-206ENST00000470363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
HLA-C-206ENST00000470363 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
HLA-C-206ENST00000470363 PPM1GO15355 546 aaPredicted RBP15.86■□□□□ 0.13
HLA-C-206ENST00000470363 COL23A1Q86Y22 540 aaPredicted RBP15.86■□□□□ 0.13
HLA-C-206ENST00000470363 PIGBQ92521 554 aa15.85■□□□□ 0.13
HLA-C-206ENST00000470363 PANK3Q9H999 370 aa15.85■□□□□ 0.13
HLA-C-206ENST00000470363 EIF4A2Q14240 407 aaKnown RBP15.84■□□□□ 0.13
HLA-C-206ENST00000470363 MPRIPQ6WCQ1 1025 aa15.84■□□□□ 0.13
HLA-C-206ENST00000470363 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
HLA-C-206ENST00000470363 PKD1L3Q7Z443 1732 aa15.83■□□□□ 0.13
HLA-C-206ENST00000470363 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
HLA-C-206ENST00000470363 AMIGO3Q86WK7 504 aa15.83■□□□□ 0.12
HLA-C-206ENST00000470363 SPG7Q9UQ90 795 aa15.83■□□□□ 0.12
HLA-C-206ENST00000470363 POLR3GLQ9BT43 218 aa15.82■□□□□ 0.12
HLA-C-206ENST00000470363 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
HLA-C-206ENST00000470363 MAP2P11137 1827 aaKnown RBP15.82■□□□□ 0.12
HLA-C-206ENST00000470363 PHKG2P15735 406 aa15.81■□□□□ 0.12
HLA-C-206ENST00000470363 POLD1P28340 1107 aa15.81■□□□□ 0.12
HLA-C-206ENST00000470363 PLEKHG2Q9H7P9 1386 aa15.81■□□□□ 0.12
HLA-C-206ENST00000470363 IGSF1Q8N6C5 1336 aa15.8■□□□□ 0.12
HLA-C-206ENST00000470363 TNNT2P45379 298 aaPredicted RBP15.8■□□□□ 0.12
HLA-C-206ENST00000470363 SMARCC1Q92922 1105 aaPredicted RBP15.8■□□□□ 0.12
HLA-C-206ENST00000470363 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
HLA-C-206ENST00000470363 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
HLA-C-206ENST00000470363 NLGN2Q8NFZ4 835 aa15.79■□□□□ 0.12
HLA-C-206ENST00000470363 KIF7Q2M1P5 1343 aa15.78■□□□□ 0.12
HLA-C-206ENST00000470363 ZNF784Q8NCA9 323 aaPredicted RBP15.78■□□□□ 0.12
HLA-C-206ENST00000470363 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
HLA-C-206ENST00000470363 LOC102724428A0A0B4J2F2 783 aa15.77■□□□□ 0.12
HLA-C-206ENST00000470363 SIK1P57059 783 aa15.77■□□□□ 0.12
HLA-C-206ENST00000470363 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.12
HLA-C-206ENST00000470363 FLAD1Q8NFF5 587 aa15.77■□□□□ 0.12
HLA-C-206ENST00000470363 ITGB4P16144 1822 aa15.77■□□□□ 0.11
HLA-C-206ENST00000470363 C5P01031 1676 aa15.76■□□□□ 0.11
HLA-C-206ENST00000470363 LINC00116Q8NCU8 138 aa15.76■□□□□ 0.11
HLA-C-206ENST00000470363 ATG3Q9NT62 314 aa15.76■□□□□ 0.11
HLA-C-206ENST00000470363 TAF1LQ8IZX4 1826 aa15.75■□□□□ 0.11
HLA-C-206ENST00000470363 ITPK1Q13572 414 aa15.75■□□□□ 0.11
HLA-C-206ENST00000470363 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
HLA-C-206ENST00000470363 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
HLA-C-206ENST00000470363 TMOD3Q9NYL9 352 aa15.75■□□□□ 0.11
HLA-C-206ENST00000470363 MSH5O43196 834 aa15.74■□□□□ 0.11
HLA-C-206ENST00000470363 GPR162Q16538 588 aa15.74■□□□□ 0.11
HLA-C-206ENST00000470363 MSL1Q68DK7 614 aa15.74■□□□□ 0.11
HLA-C-206ENST00000470363 SLC4A9Q96Q91 983 aa15.74■□□□□ 0.11
HLA-C-206ENST00000470363 C4BP0C0L5 1744 aa15.74■□□□□ 0.11
HLA-C-206ENST00000470363 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
HLA-C-206ENST00000470363 PER1O15534 1290 aaPredicted RBP15.73■□□□□ 0.11
HLA-C-206ENST00000470363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.72■□□□□ 0.11
HLA-C-206ENST00000470363 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.11
HLA-C-206ENST00000470363 SSFA2P28290 1259 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms