RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 NPDC1Q9NQX5 325 aaPredicted RBP9.24□□□□□ -0.93
VAMP3-202ENST00000470357 HRO43593 1189 aa9.23□□□□□ -0.93
VAMP3-202ENST00000470357 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
VAMP3-202ENST00000470357 C14orf37Q86TY3 774 aa9.23□□□□□ -0.93
VAMP3-202ENST00000470357 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
VAMP3-202ENST00000470357 EP400Q96L91 3159 aa9.22□□□□□ -0.93
VAMP3-202ENST00000470357 NBPF1Q3BBV0 1214 aa9.22□□□□□ -0.93
VAMP3-202ENST00000470357 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
VAMP3-202ENST00000470357 DCCP43146 1447 aa9.22□□□□□ -0.93
VAMP3-202ENST00000470357 MST1RQ04912 1400 aa9.22□□□□□ -0.93
VAMP3-202ENST00000470357 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.93
VAMP3-202ENST00000470357 ADGRB1O14514 1584 aa9.21□□□□□ -0.93
VAMP3-202ENST00000470357 PRSS12P56730 875 aa9.21□□□□□ -0.94
VAMP3-202ENST00000470357 MMRN1Q13201 1228 aa9.21□□□□□ -0.94
VAMP3-202ENST00000470357 DDX17Q92841 729 aaKnown RBP9.21□□□□□ -0.94
VAMP3-202ENST00000470357 LRRC59Q96AG4 307 aaKnown RBP9.21□□□□□ -0.94
VAMP3-202ENST00000470357 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
VAMP3-202ENST00000470357 KIAA1468Q9P260 1216 aa9.21□□□□□ -0.94
VAMP3-202ENST00000470357 PNPLA6Q8IY17 1366 aa9.21□□□□□ -0.94
VAMP3-202ENST00000470357 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
VAMP3-202ENST00000470357 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
VAMP3-202ENST00000470357 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
VAMP3-202ENST00000470357 NHSL1Q5SYE7 1610 aa9.2□□□□□ -0.94
VAMP3-202ENST00000470357 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
VAMP3-202ENST00000470357 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
VAMP3-202ENST00000470357 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 RABGEF1Q9UJ41 708 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 SBNO2Q9Y2G9 1366 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 QRICH2Q9H0J4 1663 aa9.19□□□□□ -0.94
VAMP3-202ENST00000470357 ST20-MTHFSA0A0A6YYL1 179 aa9.18□□□□□ -0.94
VAMP3-202ENST00000470357 TULP1O00294 542 aaPredicted RBP9.18□□□□□ -0.94
VAMP3-202ENST00000470357 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
VAMP3-202ENST00000470357 PTGDRQ13258 359 aa9.18□□□□□ -0.94
VAMP3-202ENST00000470357 DIEXFQ68CQ4 756 aaKnown RBP9.18□□□□□ -0.94
VAMP3-202ENST00000470357 DLC1Q96QB1 1528 aa9.18□□□□□ -0.94
VAMP3-202ENST00000470357 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
VAMP3-202ENST00000470357 YTHDC2Q9H6S0 1430 aaKnown RBP9.17□□□□□ -0.94
VAMP3-202ENST00000470357 ATAD2Q6PL18 1390 aa9.17□□□□□ -0.94
VAMP3-202ENST00000470357 CCDC7Q96M83 1385 aa9.17□□□□□ -0.94
VAMP3-202ENST00000470357 TMF1P82094 1093 aa9.17□□□□□ -0.94
VAMP3-202ENST00000470357 PACS2Q86VP3 889 aa9.17□□□□□ -0.94
VAMP3-202ENST00000470357 FNBP4Q8N3X1 1017 aaPredicted RBP9.17□□□□□ -0.94
VAMP3-202ENST00000470357 XRN1Q8IZH2 1706 aaKnown RBP9.17□□□□□ -0.94
VAMP3-202ENST00000470357 METP08581 1390 aa9.16□□□□□ -0.94
VAMP3-202ENST00000470357 LRPPRCP42704 1394 aaKnown RBP9.16□□□□□ -0.94
VAMP3-202ENST00000470357 CENPJQ9HC77 1338 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-202ENST00000470357 ADAMTS2O95450 1211 aa9.16□□□□□ -0.94
VAMP3-202ENST00000470357 PADI6Q6TGC4 694 aa9.16□□□□□ -0.94
VAMP3-202ENST00000470357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.16□□□□□ -0.94
VAMP3-202ENST00000470357 MRPL50Q8N5N7 158 aaKnown RBP9.16□□□□□ -0.94
VAMP3-202ENST00000470357 NGLY1Q96IV0 654 aa9.16□□□□□ -0.94
VAMP3-202ENST00000470357 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-202ENST00000470357 ABCC11Q96J66 1382 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 SOS2Q07890 1332 aaPredicted RBP9.15□□□□□ -0.94
VAMP3-202ENST00000470357 FCHSD2O94868 740 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 TMEM132EQ6IEE7 984 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 SIRT1Q96EB6 747 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 NBPF3Q9H094 633 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 USP21Q9UK80 565 aa9.15□□□□□ -0.94
VAMP3-202ENST00000470357 TECPR2O15040 1411 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 ATRNO75882 1429 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 ADGRL3Q9HAR2 1447 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 KIF7Q2M1P5 1343 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 WASHC2AQ641Q2 1341 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 RNF166Q96A37 237 aaPredicted RBP9.14□□□□□ -0.95
VAMP3-202ENST00000470357 TESK2Q96S53 571 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 SEPT9Q9UHD8 586 aaPredicted RBP9.14□□□□□ -0.95
VAMP3-202ENST00000470357 TRPC5Q9UL62 973 aaPredicted RBP9.14□□□□□ -0.95
VAMP3-202ENST00000470357 TRAK1Q9UPV9 953 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 C1orf167Q5SNV9 1468 aa9.14□□□□□ -0.95
VAMP3-202ENST00000470357 SMAPO00193 183 aa9.13□□□□□ -0.95
VAMP3-202ENST00000470357 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
VAMP3-202ENST00000470357 PUS7Q96PZ0 661 aaKnown RBP9.13□□□□□ -0.95
VAMP3-202ENST00000470357 GOLGA8CPA6NN73 597 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
VAMP3-202ENST00000470357 CCDC125Q86Z20 511 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 GPIHBP1Q8IV16 184 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 TATDN2Q93075 761 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 ORAI2Q96SN7 254 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 POGKQ9P215 609 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 RBM27Q9P2N5 1060 aaKnown RBP9.12□□□□□ -0.95
VAMP3-202ENST00000470357 BCL9LQ86UU0 1499 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 PTCH1Q13635 1447 aa9.12□□□□□ -0.95
VAMP3-202ENST00000470357 EVC2Q86UK5 1308 aa9.11□□□□□ -0.95
VAMP3-202ENST00000470357 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
VAMP3-202ENST00000470357 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
VAMP3-202ENST00000470357 STK26Q9P289 416 aa9.11□□□□□ -0.95
VAMP3-202ENST00000470357 PNMA3Q9UL41 463 aa9.11□□□□□ -0.95
VAMP3-202ENST00000470357 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
VAMP3-202ENST00000470357 GPR37O15354 613 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 FECHP22830 423 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 HIC1Q14526 733 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 LMOD2Q6P5Q4 547 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 NINLQ9Y2I6 1382 aa9.1□□□□□ -0.95
VAMP3-202ENST00000470357 GNPATO15228 680 aa9.09□□□□□ -0.95
VAMP3-202ENST00000470357 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms