RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
FDPS-208ENST00000470171 TNS1Q9HBL0 1735 aaKnown RBP20.95■□□□□ 0.94
FDPS-208ENST00000470171 MEGF6O75095 1541 aa20.94■□□□□ 0.94
FDPS-208ENST00000470171 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
FDPS-208ENST00000470171 AMOTQ4VCS5 1084 aa20.93■□□□□ 0.94
FDPS-208ENST00000470171 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
FDPS-208ENST00000470171 IGSF1Q8N6C5 1336 aa20.93■□□□□ 0.94
FDPS-208ENST00000470171 KCNQ2O43526 872 aa20.92■□□□□ 0.94
FDPS-208ENST00000470171 NKX1-1Q15270 411 aaPredicted RBP20.92■□□□□ 0.94
FDPS-208ENST00000470171 TXNRD1Q16881 649 aa20.92■□□□□ 0.94
FDPS-208ENST00000470171 ACSBG1Q96GR2 724 aa20.92■□□□□ 0.94
FDPS-208ENST00000470171 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
FDPS-208ENST00000470171 RGPD3A6NKT7 1758 aaPredicted RBP20.9■□□□□ 0.94
FDPS-208ENST00000470171 RGPD4Q7Z3J3 1758 aa20.9■□□□□ 0.94
FDPS-208ENST00000470171 HSP90AB1P08238 724 aaKnown RBP20.9■□□□□ 0.94
FDPS-208ENST00000470171 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
FDPS-208ENST00000470171 R3HDM1Q15032 1099 aaKnown RBP20.9■□□□□ 0.94
FDPS-208ENST00000470171 PRIM1P49642 420 aaKnown RBP20.89■□□□□ 0.93
FDPS-208ENST00000470171 MTHFSP49914 203 aa20.89■□□□□ 0.93
FDPS-208ENST00000470171 PLEKHO1Q53GL0 409 aaPredicted RBP20.89■□□□□ 0.93
FDPS-208ENST00000470171 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.93
FDPS-208ENST00000470171 CC2D1BQ5T0F9 858 aaKnown RBP20.88■□□□□ 0.93
FDPS-208ENST00000470171 PTF1AQ7RTS3 328 aa20.88■□□□□ 0.93
FDPS-208ENST00000470171 PROM2Q8N271 834 aa20.88■□□□□ 0.93
FDPS-208ENST00000470171 SYTL4Q96C24 671 aaPredicted RBP20.88■□□□□ 0.93
FDPS-208ENST00000470171 STK32BQ9NY57 414 aa20.88■□□□□ 0.93
FDPS-208ENST00000470171 IL13P35225 146 aa20.87■□□□□ 0.93
FDPS-208ENST00000470171 CYP27B1O15528 508 aa20.86■□□□□ 0.93
FDPS-208ENST00000470171 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
FDPS-208ENST00000470171 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
FDPS-208ENST00000470171 NHSQ6T4R5 1651 aa20.85■□□□□ 0.93
FDPS-208ENST00000470171 DIAPH1O60610 1272 aaKnown RBP20.84■□□□□ 0.93
FDPS-208ENST00000470171 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
FDPS-208ENST00000470171 KDRP35968 1356 aa20.84■□□□□ 0.93
FDPS-208ENST00000470171 PHKG2P15735 406 aa20.83■□□□□ 0.93
FDPS-208ENST00000470171 SLC15A2Q16348 729 aa20.83■□□□□ 0.93
FDPS-208ENST00000470171 DCAF5Q96JK2 942 aa20.82■□□□□ 0.92
FDPS-208ENST00000470171 RREB1Q92766 1687 aa20.82■□□□□ 0.92
FDPS-208ENST00000470171 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
FDPS-208ENST00000470171 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
FDPS-208ENST00000470171 SULT6B1Q6IMI4 303 aa20.81■□□□□ 0.92
FDPS-208ENST00000470171 MAP2P11137 1827 aaKnown RBP20.81■□□□□ 0.92
FDPS-208ENST00000470171 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
FDPS-208ENST00000470171 SPON1Q9HCB6 807 aa20.79■□□□□ 0.92
FDPS-208ENST00000470171 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
FDPS-208ENST00000470171 MPRIPQ6WCQ1 1025 aa20.78■□□□□ 0.92
FDPS-208ENST00000470171 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
FDPS-208ENST00000470171 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
FDPS-208ENST00000470171 SLC16A10Q8TF71 515 aa20.76■□□□□ 0.91
FDPS-208ENST00000470171 CCNL1Q9UK58 526 aaPredicted RBP20.76■□□□□ 0.91
FDPS-208ENST00000470171 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
FDPS-208ENST00000470171 SRCAPQ6ZRS2 3230 aa20.75■□□□□ 0.91
FDPS-208ENST00000470171 NUP188Q5SRE5 1749 aa20.75■□□□□ 0.91
FDPS-208ENST00000470171 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
FDPS-208ENST00000470171 PIGBQ92521 554 aa20.74■□□□□ 0.91
FDPS-208ENST00000470171 LRRC4BQ9NT99 713 aa20.74■□□□□ 0.91
FDPS-208ENST00000470171 RGPD2P0DJD1 1756 aa20.73■□□□□ 0.91
FDPS-208ENST00000470171 AKAP4Q5JQC9 854 aa20.73■□□□□ 0.91
FDPS-208ENST00000470171 FLAD1Q8NFF5 587 aa20.73■□□□□ 0.91
FDPS-208ENST00000470171 AKT1S1Q96B36 256 aa20.73■□□□□ 0.91
FDPS-208ENST00000470171 LRP5O75197 1615 aa20.73■□□□□ 0.91
FDPS-208ENST00000470171 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
FDPS-208ENST00000470171 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
FDPS-208ENST00000470171 PPP2R1AP30153 589 aa20.71■□□□□ 0.91
FDPS-208ENST00000470171 MTFR1LQ9H019 292 aa20.71■□□□□ 0.91
FDPS-208ENST00000470171 CABP4P57796 275 aa20.7■□□□□ 0.9
FDPS-208ENST00000470171 RALBP1Q15311 655 aa20.7■□□□□ 0.9
FDPS-208ENST00000470171 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
FDPS-208ENST00000470171 SHANK3Q9BYB0 1731 aa20.7■□□□□ 0.9
FDPS-208ENST00000470171 GAS2L2Q8NHY3 880 aa20.69■□□□□ 0.9
FDPS-208ENST00000470171 BTAF1O14981 1849 aa20.69■□□□□ 0.9
FDPS-208ENST00000470171 U2SURPO15042 1029 aaKnown RBP20.68■□□□□ 0.9
FDPS-208ENST00000470171 LOC102724428A0A0B4J2F2 783 aa20.67■□□□□ 0.9
FDPS-208ENST00000470171 FCHSD2O94868 740 aa20.67■□□□□ 0.9
FDPS-208ENST00000470171 SIK1P57059 783 aa20.67■□□□□ 0.9
FDPS-208ENST00000470171 PPP1R1BQ9UD71 204 aaPredicted RBP20.67■□□□□ 0.9
FDPS-208ENST00000470171 HMOX1P09601 288 aa20.66■□□□□ 0.9
FDPS-208ENST00000470171 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
FDPS-208ENST00000470171 DOT1LQ8TEK3 1739 aa20.65■□□□□ 0.9
FDPS-208ENST00000470171 COL3A1P02461 1466 aaPredicted RBP20.65■□□□□ 0.9
FDPS-208ENST00000470171 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
FDPS-208ENST00000470171 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
FDPS-208ENST00000470171 ATG3Q9NT62 314 aa20.65■□□□□ 0.9
FDPS-208ENST00000470171 PAPPAQ13219 1627 aa20.64■□□□□ 0.89
FDPS-208ENST00000470171 NEFMP07197 916 aa20.63■□□□□ 0.89
FDPS-208ENST00000470171 ASAP1Q9ULH1 1129 aa20.63■□□□□ 0.89
FDPS-208ENST00000470171 MTHFSDQ2M296 383 aaKnown RBP20.62■□□□□ 0.89
FDPS-208ENST00000470171 AK7Q96M32 723 aa20.62■□□□□ 0.89
FDPS-208ENST00000470171 ZBTB7AO95365 584 aa20.61■□□□□ 0.89
FDPS-208ENST00000470171 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
FDPS-208ENST00000470171 POLD1P28340 1107 aa20.61■□□□□ 0.89
FDPS-208ENST00000470171 ATP6V1AP38606 617 aa20.61■□□□□ 0.89
FDPS-208ENST00000470171 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
FDPS-208ENST00000470171 NFATC2IPQ8NCF5 419 aa20.61■□□□□ 0.89
FDPS-208ENST00000470171 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
FDPS-208ENST00000470171 KDM6AO15550 1401 aaPredicted RBP20.61■□□□□ 0.89
FDPS-208ENST00000470171 PNPLA7Q6ZV29 1317 aa20.6■□□□□ 0.89
FDPS-208ENST00000470171 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
FDPS-208ENST00000470171 RNMTO43148 476 aaKnown RBP20.6■□□□□ 0.89
FDPS-208ENST00000470171 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms