RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 NUP188Q5SRE5 1749 aa29.14■■■□□ 2.26
RTN4R-205ENST00000469601 TXNRD1Q16881 649 aa29.14■■■□□ 2.26
RTN4R-205ENST00000469601 NHSQ6T4R5 1651 aa29.14■■■□□ 2.26
RTN4R-205ENST00000469601 MORC1Q86VD1 984 aa29.12■■■□□ 2.25
RTN4R-205ENST00000469601 PROM2Q8N271 834 aa29.12■■■□□ 2.25
RTN4R-205ENST00000469601 LRP5O75197 1615 aa29.1■■■□□ 2.25
RTN4R-205ENST00000469601 ANKRD26Q9UPS8 1709 aa29.1■■■□□ 2.25
RTN4R-205ENST00000469601 RGPD2P0DJD1 1756 aa29.08■■■□□ 2.25
RTN4R-205ENST00000469601 PCDH11XQ9BZA7 1347 aa29.08■■■□□ 2.25
RTN4R-205ENST00000469601 PCDH11YQ9BZA8 1340 aa29.08■■■□□ 2.25
RTN4R-205ENST00000469601 SYTL4Q96C24 671 aaPredicted RBP29.07■■■□□ 2.24
RTN4R-205ENST00000469601 NCAPD2Q15021 1401 aa29.06■■■□□ 2.24
RTN4R-205ENST00000469601 PRIM1P49642 420 aaKnown RBP29.06■■■□□ 2.24
RTN4R-205ENST00000469601 EYA1Q99502 592 aa29.06■■■□□ 2.24
RTN4R-205ENST00000469601 STK32BQ9NY57 414 aa29.05■■■□□ 2.24
RTN4R-205ENST00000469601 SRCAPQ6ZRS2 3230 aa29.04■■■□□ 2.24
RTN4R-205ENST00000469601 EIF4A2Q14240 407 aaKnown RBP29.03■■■□□ 2.24
RTN4R-205ENST00000469601 ANO8Q9HCE9 1232 aaPredicted RBP29.03■■■□□ 2.24
RTN4R-205ENST00000469601 SPG7Q9UQ90 795 aa29.03■■■□□ 2.24
RTN4R-205ENST00000469601 AMER1Q5JTC6 1135 aaPredicted RBP29.02■■■□□ 2.24
RTN4R-205ENST00000469601 MAP2P11137 1827 aaKnown RBP29.01■■■□□ 2.24
RTN4R-205ENST00000469601 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.01■■■□□ 2.23
RTN4R-205ENST00000469601 SLC27A3Q5K4L6 730 aa29■■■□□ 2.23
RTN4R-205ENST00000469601 SLC15A2Q16348 729 aa28.99■■■□□ 2.23
RTN4R-205ENST00000469601 PLEKHG2Q9H7P9 1386 aa28.99■■■□□ 2.23
RTN4R-205ENST00000469601 SPON1Q9HCB6 807 aa28.98■■■□□ 2.23
RTN4R-205ENST00000469601 BTAF1O14981 1849 aa28.98■■■□□ 2.23
RTN4R-205ENST00000469601 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
RTN4R-205ENST00000469601 CYP27B1O15528 508 aa28.96■■■□□ 2.23
RTN4R-205ENST00000469601 PER1O15534 1290 aaPredicted RBP28.96■■■□□ 2.23
RTN4R-205ENST00000469601 IGSF1Q8N6C5 1336 aa28.94■■■□□ 2.22
RTN4R-205ENST00000469601 DOT1LQ8TEK3 1739 aa28.94■■■□□ 2.22
RTN4R-205ENST00000469601 HMGB2P26583 209 aaKnown RBP28.93■■■□□ 2.22
RTN4R-205ENST00000469601 NKX1-1Q15270 411 aaPredicted RBP28.93■■■□□ 2.22
RTN4R-205ENST00000469601 LRRC4BQ9NT99 713 aa28.92■■■□□ 2.22
RTN4R-205ENST00000469601 NPC1L1Q9UHC9 1359 aa28.9■■■□□ 2.22
RTN4R-205ENST00000469601 PKD1L3Q7Z443 1732 aa28.9■■■□□ 2.22
RTN4R-205ENST00000469601 IFNL2Q8IZJ0 200 aa28.9■■■□□ 2.22
RTN4R-205ENST00000469601 CC2D1BQ5T0F9 858 aaKnown RBP28.88■■■□□ 2.21
RTN4R-205ENST00000469601 PPP1R1BQ9UD71 204 aaPredicted RBP28.88■■■□□ 2.21
RTN4R-205ENST00000469601 KAT6BQ8WYB5 2073 aa28.88■■■□□ 2.21
RTN4R-205ENST00000469601 MPRIPQ6WCQ1 1025 aa28.87■■■□□ 2.21
RTN4R-205ENST00000469601 CCNL1Q9UK58 526 aaPredicted RBP28.87■■■□□ 2.21
RTN4R-205ENST00000469601 PHKG2P15735 406 aa28.86■■■□□ 2.21
RTN4R-205ENST00000469601 PLEKHO1Q53GL0 409 aaPredicted RBP28.86■■■□□ 2.21
RTN4R-205ENST00000469601 PAPPAQ13219 1627 aa28.86■■■□□ 2.21
RTN4R-205ENST00000469601 MTHFSP49914 203 aa28.85■■■□□ 2.21
RTN4R-205ENST00000469601 AMOTQ4VCS5 1084 aa28.85■■■□□ 2.21
RTN4R-205ENST00000469601 SMARCC1Q92922 1105 aaPredicted RBP28.85■■■□□ 2.21
RTN4R-205ENST00000469601 ZNF827Q17R98 1081 aa28.84■■■□□ 2.21
RTN4R-205ENST00000469601 AKT1S1Q96B36 256 aa28.84■■■□□ 2.21
RTN4R-205ENST00000469601 PDGFDQ9GZP0 370 aaPredicted RBP28.84■■■□□ 2.21
RTN4R-205ENST00000469601 ZBTB7AO95365 584 aa28.83■■■□□ 2.21
RTN4R-205ENST00000469601 HSP90AB1P08238 724 aaKnown RBP28.83■■■□□ 2.21
RTN4R-205ENST00000469601 IL13P35225 146 aa28.83■■■□□ 2.21
RTN4R-205ENST00000469601 MTFR1LQ9H019 292 aa28.83■■■□□ 2.21
RTN4R-205ENST00000469601 CASZ1Q86V15 1759 aa28.83■■■□□ 2.21
RTN4R-205ENST00000469601 PALLDQ8WX93 1383 aa28.81■■■□□ 2.2
RTN4R-205ENST00000469601 TMOD3Q9NYL9 352 aa28.81■■■□□ 2.2
RTN4R-205ENST00000469601 TFCP2L1Q9NZI6 479 aa28.81■■■□□ 2.2
RTN4R-205ENST00000469601 KCNQ4P56696 695 aa28.8■■■□□ 2.2
RTN4R-205ENST00000469601 SULT6B1Q6IMI4 303 aa28.8■■■□□ 2.2
RTN4R-205ENST00000469601 PIGBQ92521 554 aa28.8■■■□□ 2.2
RTN4R-205ENST00000469601 KDRP35968 1356 aa28.78■■■□□ 2.2
RTN4R-205ENST00000469601 LY75O60449 1722 aa28.78■■■□□ 2.2
RTN4R-205ENST00000469601 AEBP1Q8IUX7 1158 aa28.78■■■□□ 2.2
RTN4R-205ENST00000469601 ATF5Q9Y2D1 282 aaPredicted RBP28.78■■■□□ 2.2
RTN4R-205ENST00000469601 ZNF530Q6P9A1 599 aaPredicted RBP28.77■■■□□ 2.2
RTN4R-205ENST00000469601 SLC16A10Q8TF71 515 aa28.77■■■□□ 2.2
RTN4R-205ENST00000469601 DCAF5Q96JK2 942 aa28.77■■■□□ 2.2
RTN4R-205ENST00000469601 DIAPH1O60610 1272 aaKnown RBP28.76■■■□□ 2.19
RTN4R-205ENST00000469601 C1orf141Q5JVX7 400 aa28.76■■■□□ 2.19
RTN4R-205ENST00000469601 ERVV-2B6SEH9 535 aa28.75■■■□□ 2.19
RTN4R-205ENST00000469601 PTGER2P43116 358 aa28.74■■■□□ 2.19
RTN4R-205ENST00000469601 CNGB1Q14028 1251 aaPredicted RBP28.74■■■□□ 2.19
RTN4R-205ENST00000469601 TOGARAM1Q9Y4F4 1720 aa28.74■■■□□ 2.19
RTN4R-205ENST00000469601 PNPLA7Q6ZV29 1317 aa28.71■■■□□ 2.19
RTN4R-205ENST00000469601 FLAD1Q8NFF5 587 aa28.69■■■□□ 2.18
RTN4R-205ENST00000469601 LOC102724428A0A0B4J2F2 783 aa28.68■■■□□ 2.18
RTN4R-205ENST00000469601 SIK1P57059 783 aa28.68■■■□□ 2.18
RTN4R-205ENST00000469601 SGIP1Q9BQI5 828 aa28.68■■■□□ 2.18
RTN4R-205ENST00000469601 ASAP1Q9ULH1 1129 aa28.68■■■□□ 2.18
RTN4R-205ENST00000469601 DCAF8L1A6NGE4 600 aa28.67■■■□□ 2.18
RTN4R-205ENST00000469601 CABP4P57796 275 aa28.67■■■□□ 2.18
RTN4R-205ENST00000469601 CFAP53Q96M91 514 aa28.67■■■□□ 2.18
RTN4R-205ENST00000469601 ITGB4P16144 1822 aa28.66■■■□□ 2.18
RTN4R-205ENST00000469601 HMOX1P09601 288 aa28.66■■■□□ 2.18
RTN4R-205ENST00000469601 ATG3Q9NT62 314 aa28.66■■■□□ 2.18
RTN4R-205ENST00000469601 QSER1Q2KHR3 1735 aa28.66■■■□□ 2.18
RTN4R-205ENST00000469601 MSH5O43196 834 aa28.65■■■□□ 2.18
RTN4R-205ENST00000469601 POLD1P28340 1107 aa28.65■■■□□ 2.18
RTN4R-205ENST00000469601 AKAP4Q5JQC9 854 aa28.65■■■□□ 2.18
RTN4R-205ENST00000469601 ARXQ96QS3 562 aa28.65■■■□□ 2.18
RTN4R-205ENST00000469601 AK7Q96M32 723 aa28.64■■■□□ 2.18
RTN4R-205ENST00000469601 KDM6AO15550 1401 aaPredicted RBP28.63■■■□□ 2.17
RTN4R-205ENST00000469601 C5P01031 1676 aa28.62■■■□□ 2.17
RTN4R-205ENST00000469601 COL23A1Q86Y22 540 aaPredicted RBP28.62■■■□□ 2.17
RTN4R-205ENST00000469601 U2SURPO15042 1029 aaKnown RBP28.61■■■□□ 2.17
RTN4R-205ENST00000469601 ATP6V1AP38606 617 aa28.61■■■□□ 2.17
RTN4R-205ENST00000469601 COL3A1P02461 1466 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms