RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 EIF5BO60841 1220 aaKnown RBP22.2■■□□□ 1.15
MCF2L-221ENST00000469415 BMP2KLQ5H9B9 411 aa22.2■■□□□ 1.15
MCF2L-221ENST00000469415 SIRT1Q96EB6 747 aa22.2■■□□□ 1.14
MCF2L-221ENST00000469415 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
MCF2L-221ENST00000469415 CHMP4BQ9H444 224 aaKnown RBP22.2■■□□□ 1.14
MCF2L-221ENST00000469415 EXOC6BQ9Y2D4 811 aa22.2■■□□□ 1.14
MCF2L-221ENST00000469415 MSH6P52701 1360 aa22.2■■□□□ 1.14
MCF2L-221ENST00000469415 EIF2S2P20042 333 aaKnown RBP22.19■■□□□ 1.14
MCF2L-221ENST00000469415 BRPF1P55201 1214 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-221ENST00000469415 PLEKHM2Q8IWE5 1019 aa22.18■■□□□ 1.14
MCF2L-221ENST00000469415 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
MCF2L-221ENST00000469415 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
MCF2L-221ENST00000469415 CEP85Q6P2H3 762 aa22.17■■□□□ 1.14
MCF2L-221ENST00000469415 PTCH1Q13635 1447 aa22.16■■□□□ 1.14
MCF2L-221ENST00000469415 STK31Q9BXU1 1019 aa22.15■■□□□ 1.14
MCF2L-221ENST00000469415 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
MCF2L-221ENST00000469415 CHMP5Q9NZZ3 219 aa22.15■■□□□ 1.14
MCF2L-221ENST00000469415 ANXA1P04083 346 aa22.15■■□□□ 1.14
MCF2L-221ENST00000469415 DCTPP1Q9H773 170 aa22.15■■□□□ 1.14
MCF2L-221ENST00000469415 TECPR2O15040 1411 aa22.14■■□□□ 1.13
MCF2L-221ENST00000469415 MCM4P33991 863 aa22.14■■□□□ 1.13
MCF2L-221ENST00000469415 INTS3Q68E01 1043 aaKnown RBP22.14■■□□□ 1.13
MCF2L-221ENST00000469415 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.13
MCF2L-221ENST00000469415 ESCO1Q5FWF5 840 aa22.14■■□□□ 1.13
MCF2L-221ENST00000469415 PIK3R4Q99570 1358 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 CDC45O75419 566 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 ANKRD44Q8N8A2 993 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 TBX22Q9Y458 520 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 OVOS2A0A0J9YW53 1432 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 OVOS2Q6IE36 1432 aa22.13■■□□□ 1.13
MCF2L-221ENST00000469415 HOXC9P31274 260 aa22.12■■□□□ 1.13
MCF2L-221ENST00000469415 KIF2CQ99661 725 aa22.12■■□□□ 1.13
MCF2L-221ENST00000469415 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
MCF2L-221ENST00000469415 LRRC59Q96AG4 307 aaKnown RBP22.11■■□□□ 1.13
MCF2L-221ENST00000469415 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
MCF2L-221ENST00000469415 FLT4P35916 1363 aa22.11■■□□□ 1.13
MCF2L-221ENST00000469415 DLG5Q8TDM6 1919 aa22.1■■□□□ 1.13
MCF2L-221ENST00000469415 SDSP20132 328 aa22.1■■□□□ 1.13
MCF2L-221ENST00000469415 NOL8Q76FK4 1167 aaKnown RBP22.1■■□□□ 1.13
MCF2L-221ENST00000469415 SETD1BQ9UPS6 1966 aaKnown RBP22.09■■□□□ 1.13
MCF2L-221ENST00000469415 RBM25P49756 843 aaKnown RBP22.09■■□□□ 1.13
MCF2L-221ENST00000469415 GNAT3A8MTJ3 354 aa22.09■■□□□ 1.13
MCF2L-221ENST00000469415 PSME1Q06323 249 aa22.09■■□□□ 1.13
MCF2L-221ENST00000469415 GAS2L2Q8NHY3 880 aa22.09■■□□□ 1.13
MCF2L-221ENST00000469415 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
MCF2L-221ENST00000469415 RTL1A6NKG5 1358 aa22.08■■□□□ 1.13
MCF2L-221ENST00000469415 FLIIQ13045 1269 aa22.08■■□□□ 1.13
MCF2L-221ENST00000469415 TTC22Q5TAA0 569 aa22.08■■□□□ 1.13
MCF2L-221ENST00000469415 TRAK2O60296 914 aa22.07■■□□□ 1.12
MCF2L-221ENST00000469415 FOXD4L5Q5VV16 416 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-221ENST00000469415 FOXD4L4Q8WXT5 416 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-221ENST00000469415 VIRMAQ69YN4 1812 aaKnown RBP22.07■■□□□ 1.12
MCF2L-221ENST00000469415 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-221ENST00000469415 RPAP2Q8IXW5 612 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-221ENST00000469415 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
MCF2L-221ENST00000469415 IL1RAPL2Q9NP60 686 aa22.07■■□□□ 1.12
MCF2L-221ENST00000469415 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 PNMA6EA0A0J9YXQ4 647 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 RILPL2Q969X0 211 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 TTC21AQ8NDW8 1320 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 CRB1P82279 1406 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 RIMS1Q86UR5 1692 aaKnown RBP22.06■■□□□ 1.12
MCF2L-221ENST00000469415 KCNQ3O43525 872 aa22.06■■□□□ 1.12
MCF2L-221ENST00000469415 TNPO1Q92973 898 aaKnown RBP22.06■■□□□ 1.12
MCF2L-221ENST00000469415 PHF8Q9UPP1 1060 aa22.05■■□□□ 1.12
MCF2L-221ENST00000469415 TRIM6-TRIM34B2RNG4 842 aa22.05■■□□□ 1.12
MCF2L-221ENST00000469415 MAP4K4O95819 1239 aaPredicted RBP22.05■■□□□ 1.12
MCF2L-221ENST00000469415 UBR1Q8IWV7 1749 aa22.05■■□□□ 1.12
MCF2L-221ENST00000469415 LRRFIP2Q9Y608 721 aaKnown RBP22.04■■□□□ 1.12
MCF2L-221ENST00000469415 HDGFL1Q5TGJ6 251 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 MPRIPQ6WCQ1 1025 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 CEP170BQ9Y4F5 1589 aaPredicted RBP22.04■■□□□ 1.12
MCF2L-221ENST00000469415 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 PANK2Q9BZ23 570 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 RGS12O14924 1447 aa22.04■■□□□ 1.12
MCF2L-221ENST00000469415 C3P01024 1663 aa22.03■■□□□ 1.12
MCF2L-221ENST00000469415 PTPRCP08575 1304 aa22.03■■□□□ 1.12
MCF2L-221ENST00000469415 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
MCF2L-221ENST00000469415 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
MCF2L-221ENST00000469415 ORAI2Q96SN7 254 aa22.03■■□□□ 1.12
MCF2L-221ENST00000469415 USP31Q70CQ4 1352 aa22.02■■□□□ 1.12
MCF2L-221ENST00000469415 GNAI2P04899 355 aa22.02■■□□□ 1.12
MCF2L-221ENST00000469415 SSFA2P28290 1259 aa22.02■■□□□ 1.12
MCF2L-221ENST00000469415 PEAK1Q9H792 1746 aa22.02■■□□□ 1.12
MCF2L-221ENST00000469415 K7ELQ4 463 aaPredicted RBP22.02■■□□□ 1.12
MCF2L-221ENST00000469415 HMMRO75330 724 aa22.02■■□□□ 1.12
MCF2L-221ENST00000469415 CCDC30Q5VVM6 783 aa22.01■■□□□ 1.11
MCF2L-221ENST00000469415 MON2Q7Z3U7 1717 aa22.01■■□□□ 1.11
MCF2L-221ENST00000469415 ATP10DQ9P241 1426 aa22.01■■□□□ 1.11
MCF2L-221ENST00000469415 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
MCF2L-221ENST00000469415 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
MCF2L-221ENST00000469415 NUTM1Q86Y26 1132 aa21.99■■□□□ 1.11
MCF2L-221ENST00000469415 KIAA0232Q92628 1395 aa21.99■■□□□ 1.11
MCF2L-221ENST00000469415 CCT4P50991 539 aaKnown RBP21.99■■□□□ 1.11
MCF2L-221ENST00000469415 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
MCF2L-221ENST00000469415 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
MCF2L-221ENST00000469415 NCLP19338 710 aaKnown RBP21.98■■□□□ 1.11
MCF2L-221ENST00000469415 GOLGA6L3A6NEY3 463 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms