RNA–Protein interactions for RNA: ENST00000469227.5

LCP1-206, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-206ENST00000469227 SPG7Q9UQ90 795 aa18.83■□□□□ 0.6
LCP1-206ENST00000469227 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
LCP1-206ENST00000469227 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
LCP1-206ENST00000469227 SULT6B1Q6IMI4 303 aa18.81■□□□□ 0.6
LCP1-206ENST00000469227 PCDH11XQ9BZA7 1347 aa18.8■□□□□ 0.6
LCP1-206ENST00000469227 PCDH11YQ9BZA8 1340 aa18.8■□□□□ 0.6
LCP1-206ENST00000469227 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
LCP1-206ENST00000469227 APBA3O96018 575 aa18.8■□□□□ 0.6
LCP1-206ENST00000469227 NUDCQ9Y266 331 aa18.8■□□□□ 0.6
LCP1-206ENST00000469227 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
LCP1-206ENST00000469227 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
LCP1-206ENST00000469227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.79■□□□□ 0.6
LCP1-206ENST00000469227 BCL9O00512 1426 aa18.79■□□□□ 0.6
LCP1-206ENST00000469227 KAT6BQ8WYB5 2073 aa18.78■□□□□ 0.6
LCP1-206ENST00000469227 DEFB132Q7Z7B7 95 aa18.78■□□□□ 0.6
LCP1-206ENST00000469227 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
LCP1-206ENST00000469227 SBF2Q86WG5 1849 aa18.78■□□□□ 0.6
LCP1-206ENST00000469227 HMOX1P09601 288 aa18.77■□□□□ 0.6
LCP1-206ENST00000469227 AMOTQ4VCS5 1084 aa18.77■□□□□ 0.6
LCP1-206ENST00000469227 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.6
LCP1-206ENST00000469227 TNS1Q9HBL0 1735 aaKnown RBP18.76■□□□□ 0.59
LCP1-206ENST00000469227 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
LCP1-206ENST00000469227 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
LCP1-206ENST00000469227 SHANK3Q9BYB0 1731 aa18.75■□□□□ 0.59
LCP1-206ENST00000469227 EN1Q05925 392 aaPredicted RBP18.75■□□□□ 0.59
LCP1-206ENST00000469227 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
LCP1-206ENST00000469227 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
LCP1-206ENST00000469227 KDRP35968 1356 aa18.75■□□□□ 0.59
LCP1-206ENST00000469227 COL3A1P02461 1466 aaPredicted RBP18.75■□□□□ 0.59
LCP1-206ENST00000469227 CYP27B1O15528 508 aa18.74■□□□□ 0.59
LCP1-206ENST00000469227 KCNQ2O43526 872 aa18.74■□□□□ 0.59
LCP1-206ENST00000469227 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
LCP1-206ENST00000469227 EP400Q96L91 3159 aa18.73■□□□□ 0.59
LCP1-206ENST00000469227 U2AF1L5P0DN76 240 aaPredicted RBP18.72■□□□□ 0.59
LCP1-206ENST00000469227 U2AF1Q01081 240 aaKnown RBP eCLIP18.72■□□□□ 0.59
LCP1-206ENST00000469227 C1orf141Q5JVX7 400 aa18.72■□□□□ 0.59
LCP1-206ENST00000469227 ZNF530Q6P9A1 599 aaPredicted RBP18.72■□□□□ 0.59
LCP1-206ENST00000469227 PRKRIP1Q9H875 184 aaPredicted RBP18.72■□□□□ 0.59
LCP1-206ENST00000469227 NHSQ6T4R5 1651 aa18.72■□□□□ 0.59
LCP1-206ENST00000469227 PHKG2P15735 406 aa18.71■□□□□ 0.59
LCP1-206ENST00000469227 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
LCP1-206ENST00000469227 EZH2Q15910 746 aaKnown RBP18.71■□□□□ 0.59
LCP1-206ENST00000469227 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
LCP1-206ENST00000469227 PLSCR1O15162 318 aa18.7■□□□□ 0.58
LCP1-206ENST00000469227 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
LCP1-206ENST00000469227 CAMKK2Q96RR4 588 aa18.7■□□□□ 0.58
LCP1-206ENST00000469227 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
LCP1-206ENST00000469227 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
LCP1-206ENST00000469227 ANP32CO43423 234 aa18.67■□□□□ 0.58
LCP1-206ENST00000469227 NEFMP07197 916 aa18.67■□□□□ 0.58
LCP1-206ENST00000469227 MPRIPQ6WCQ1 1025 aa18.67■□□□□ 0.58
LCP1-206ENST00000469227 BTAF1O14981 1849 aa18.66■□□□□ 0.58
LCP1-206ENST00000469227 FCHSD2O94868 740 aa18.66■□□□□ 0.58
LCP1-206ENST00000469227 DCAF5Q96JK2 942 aa18.66■□□□□ 0.58
LCP1-206ENST00000469227 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
LCP1-206ENST00000469227 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
LCP1-206ENST00000469227 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
LCP1-206ENST00000469227 MTHFSDQ2M296 383 aaKnown RBP18.64■□□□□ 0.57
LCP1-206ENST00000469227 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
LCP1-206ENST00000469227 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
LCP1-206ENST00000469227 RGPD3A6NKT7 1758 aaPredicted RBP18.63■□□□□ 0.57
LCP1-206ENST00000469227 RGPD4Q7Z3J3 1758 aa18.63■□□□□ 0.57
LCP1-206ENST00000469227 NBPF14Q5TI25 921 aa18.63■□□□□ 0.57
LCP1-206ENST00000469227 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
LCP1-206ENST00000469227 ERVV-2B6SEH9 535 aa18.62■□□□□ 0.57
LCP1-206ENST00000469227 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
LCP1-206ENST00000469227 ITGB4P16144 1822 aa18.62■□□□□ 0.57
LCP1-206ENST00000469227 CABP4P57796 275 aa18.61■□□□□ 0.57
LCP1-206ENST00000469227 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.57
LCP1-206ENST00000469227 TOGARAM1Q9Y4F4 1720 aa18.6■□□□□ 0.57
LCP1-206ENST00000469227 PIGBQ92521 554 aa18.6■□□□□ 0.57
LCP1-206ENST00000469227 SMARCC1Q92922 1105 aaPredicted RBP18.6■□□□□ 0.57
LCP1-206ENST00000469227 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
LCP1-206ENST00000469227 RREB1Q92766 1687 aa18.6■□□□□ 0.57
LCP1-206ENST00000469227 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.57
LCP1-206ENST00000469227 GNAT3A8MTJ3 354 aa18.58■□□□□ 0.56
LCP1-206ENST00000469227 PROM2Q8N271 834 aa18.58■□□□□ 0.56
LCP1-206ENST00000469227 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
LCP1-206ENST00000469227 RNMTO43148 476 aaKnown RBP18.57■□□□□ 0.56
LCP1-206ENST00000469227 SLC27A3Q5K4L6 730 aa18.57■□□□□ 0.56
LCP1-206ENST00000469227 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
LCP1-206ENST00000469227 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
LCP1-206ENST00000469227 HMGB2P26583 209 aaKnown RBP18.56■□□□□ 0.56
LCP1-206ENST00000469227 NFATC2IPQ8NCF5 419 aa18.56■□□□□ 0.56
LCP1-206ENST00000469227 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
LCP1-206ENST00000469227 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
LCP1-206ENST00000469227 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
LCP1-206ENST00000469227 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
LCP1-206ENST00000469227 STK32BQ9NY57 414 aa18.55■□□□□ 0.56
LCP1-206ENST00000469227 CCNL1Q9UK58 526 aaPredicted RBP18.55■□□□□ 0.56
LCP1-206ENST00000469227 PSDA5PKW4 1024 aaPredicted RBP18.54■□□□□ 0.56
LCP1-206ENST00000469227 R3HDM1Q15032 1099 aaKnown RBP18.54■□□□□ 0.56
LCP1-206ENST00000469227 SLC52A2Q9HAB3 445 aa18.54■□□□□ 0.56
LCP1-206ENST00000469227 ASAP1Q9ULH1 1129 aa18.54■□□□□ 0.56
LCP1-206ENST00000469227 TEFQ10587 303 aa18.53■□□□□ 0.56
LCP1-206ENST00000469227 PLEKHF1Q96S99 279 aa18.53■□□□□ 0.56
LCP1-206ENST00000469227 LY75O60449 1722 aa18.52■□□□□ 0.56
LCP1-206ENST00000469227 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.56
LCP1-206ENST00000469227 ATG3Q9NT62 314 aa18.52■□□□□ 0.56
LCP1-206ENST00000469227 LRRC4BQ9NT99 713 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms