RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 NUP188Q5SRE5 1749 aa9.87□□□□□ -0.83
SNRPD3-205ENST00000468770 MYOM1P52179 1685 aa9.87□□□□□ -0.83
SNRPD3-205ENST00000468770 LRP5O75197 1615 aa9.86□□□□□ -0.83
SNRPD3-205ENST00000468770 POLKQ9UBT6 870 aa9.86□□□□□ -0.83
SNRPD3-205ENST00000468770 WASHC2AQ641Q2 1341 aa9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 SLC15A2Q16348 729 aa9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 PPP1R1BQ9UD71 204 aaPredicted RBP9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 MEGF6O75095 1541 aa9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 RGPD3A6NKT7 1758 aaPredicted RBP9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 RGPD4Q7Z3J3 1758 aa9.85□□□□□ -0.83
SNRPD3-205ENST00000468770 RGPD2P0DJD1 1756 aa9.84□□□□□ -0.83
SNRPD3-205ENST00000468770 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
SNRPD3-205ENST00000468770 NHSQ6T4R5 1651 aa9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 SLC27A3Q5K4L6 730 aa9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 EYA1Q99502 592 aa9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 PDGFDQ9GZP0 370 aaPredicted RBP9.83□□□□□ -0.84
SNRPD3-205ENST00000468770 ZBTB7AO95365 584 aa9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 LRRC4BQ9NT99 713 aa9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 SPG7Q9UQ90 795 aa9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 NSD2O96028 1365 aa9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 MAP2P11137 1827 aaKnown RBP9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
SNRPD3-205ENST00000468770 CYP27B1O15528 508 aa9.81□□□□□ -0.84
SNRPD3-205ENST00000468770 EIF4A2Q14240 407 aaKnown RBP9.81□□□□□ -0.84
SNRPD3-205ENST00000468770 MPRIPQ6WCQ1 1025 aa9.81□□□□□ -0.84
SNRPD3-205ENST00000468770 ATF5Q9Y2D1 282 aaPredicted RBP9.81□□□□□ -0.84
SNRPD3-205ENST00000468770 BTAF1O14981 1849 aa9.81□□□□□ -0.84
SNRPD3-205ENST00000468770 KCNQ4P56696 695 aa9.8□□□□□ -0.84
SNRPD3-205ENST00000468770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNRPD3-205ENST00000468770 CCNL1Q9UK58 526 aaPredicted RBP9.8□□□□□ -0.84
SNRPD3-205ENST00000468770 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-205ENST00000468770 ZNF827Q17R98 1081 aa9.79□□□□□ -0.84
SNRPD3-205ENST00000468770 AKT1S1Q96B36 256 aa9.79□□□□□ -0.84
SNRPD3-205ENST00000468770 MTFR1LQ9H019 292 aa9.79□□□□□ -0.84
SNRPD3-205ENST00000468770 TFCP2L1Q9NZI6 479 aa9.79□□□□□ -0.84
SNRPD3-205ENST00000468770 DCAF8L1A6NGE4 600 aa9.78□□□□□ -0.84
SNRPD3-205ENST00000468770 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-205ENST00000468770 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
SNRPD3-205ENST00000468770 IFNL2Q8IZJ0 200 aa9.78□□□□□ -0.84
SNRPD3-205ENST00000468770 DOT1LQ8TEK3 1739 aa9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 SHANK3Q9BYB0 1731 aa9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 NCAPD2Q15021 1401 aa9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 PTGER2P43116 358 aa9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 SMARCC1Q92922 1105 aaPredicted RBP9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 IGSF1Q8N6C5 1336 aa9.77□□□□□ -0.85
SNRPD3-205ENST00000468770 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 PHKG2P15735 406 aa9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 CC2D1BQ5T0F9 858 aaKnown RBP9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 SLC16A10Q8TF71 515 aa9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 PIGBQ92521 554 aa9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 TMOD3Q9NYL9 352 aa9.76□□□□□ -0.85
SNRPD3-205ENST00000468770 PALLDQ8WX93 1383 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 CASZ1Q86V15 1759 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 MSH5O43196 834 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 MTHFSP49914 203 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 CNGB1Q14028 1251 aaPredicted RBP9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 AMOTQ4VCS5 1084 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 SULT6B1Q6IMI4 303 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 ARXQ96QS3 562 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 PNPLA7Q6ZV29 1317 aa9.75□□□□□ -0.85
SNRPD3-205ENST00000468770 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 POLD1P28340 1107 aa9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 IL13P35225 146 aa9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 SGIP1Q9BQI5 828 aa9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 SYT17Q9BSW7 474 aa9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
SNRPD3-205ENST00000468770 ZNF530Q6P9A1 599 aaPredicted RBP9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 FLAD1Q8NFF5 587 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 DCAF5Q96JK2 942 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 ASAP1Q9ULH1 1129 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 PLEKHG2Q9H7P9 1386 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 LY75O60449 1722 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 PKD1L3Q7Z443 1732 aa9.73□□□□□ -0.85
SNRPD3-205ENST00000468770 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 ERVV-2B6SEH9 535 aa9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 SIK1P57059 783 aa9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 COL23A1Q86Y22 540 aaPredicted RBP9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 AK7Q96M32 723 aa9.72□□□□□ -0.85
SNRPD3-205ENST00000468770 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.86
SNRPD3-205ENST00000468770 ATP6V1AP38606 617 aa9.71□□□□□ -0.86
SNRPD3-205ENST00000468770 CABP4P57796 275 aa9.71□□□□□ -0.86
SNRPD3-205ENST00000468770 KLHL34Q8N239 644 aa9.71□□□□□ -0.86
SNRPD3-205ENST00000468770 ATG3Q9NT62 314 aa9.71□□□□□ -0.86
SNRPD3-205ENST00000468770 ITGB4P16144 1822 aa9.7□□□□□ -0.86
SNRPD3-205ENST00000468770 HMOX1P09601 288 aa9.7□□□□□ -0.86
SNRPD3-205ENST00000468770 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
SNRPD3-205ENST00000468770 PHF14O94880 888 aa9.69□□□□□ -0.86
SNRPD3-205ENST00000468770 KDRP35968 1356 aa9.69□□□□□ -0.86
SNRPD3-205ENST00000468770 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
SNRPD3-205ENST00000468770 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
SNRPD3-205ENST00000468770 NPC1L1Q9UHC9 1359 aa9.69□□□□□ -0.86
SNRPD3-205ENST00000468770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms