RNA–Protein interactions for RNA: ENST00000467997.6

PACRGL-204, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-204ENST00000467997 MTHFSP49914 203 aa30.19■■■□□ 2.42
PACRGL-204ENST00000467997 PARD3Q8TEW0 1356 aa30.19■■■□□ 2.42
PACRGL-204ENST00000467997 IGSF1Q8N6C5 1336 aa30.18■■■□□ 2.42
PACRGL-204ENST00000467997 PCDH11XQ9BZA7 1347 aa30.15■■■□□ 2.42
PACRGL-204ENST00000467997 PCDH11YQ9BZA8 1340 aa30.15■■■□□ 2.42
PACRGL-204ENST00000467997 SHANK3Q9BYB0 1731 aa30.15■■■□□ 2.42
PACRGL-204ENST00000467997 PLEKHG2Q9H7P9 1386 aa30.14■■■□□ 2.42
PACRGL-204ENST00000467997 CAMKK2Q96RR4 588 aa30.14■■■□□ 2.41
PACRGL-204ENST00000467997 NHSQ6T4R5 1651 aa30.13■■■□□ 2.41
PACRGL-204ENST00000467997 EZH2Q15910 746 aaKnown RBP30.12■■■□□ 2.41
PACRGL-204ENST00000467997 ACSBG1Q96GR2 724 aa30.12■■■□□ 2.41
PACRGL-204ENST00000467997 IL13P35225 146 aa30.11■■■□□ 2.41
PACRGL-204ENST00000467997 PKD1L3Q7Z443 1732 aa30.11■■■□□ 2.41
PACRGL-204ENST00000467997 SPG7Q9UQ90 795 aa30.11■■■□□ 2.41
PACRGL-204ENST00000467997 PTF1AQ7RTS3 328 aa30.1■■■□□ 2.41
PACRGL-204ENST00000467997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.1■■■□□ 2.419e-6■□□□□ 9.4
PACRGL-204ENST00000467997 PLSCR1O15162 318 aa30.09■■■□□ 2.41
PACRGL-204ENST00000467997 KCNQ2O43526 872 aa30.09■■■□□ 2.41
PACRGL-204ENST00000467997 RGPD3A6NKT7 1758 aaPredicted RBP30.09■■■□□ 2.41
PACRGL-204ENST00000467997 RGPD4Q7Z3J3 1758 aa30.09■■■□□ 2.41
PACRGL-204ENST00000467997 DIAPH1O60610 1272 aaKnown RBP30.07■■■□□ 2.4
PACRGL-204ENST00000467997 DDX10Q13206 875 aaKnown RBP30.05■■■□□ 2.4
PACRGL-204ENST00000467997 CYP27B1O15528 508 aa30.04■■■□□ 2.4
PACRGL-204ENST00000467997 SULT6B1Q6IMI4 303 aa30.04■■■□□ 2.4
PACRGL-204ENST00000467997 KDRP35968 1356 aa30.04■■■□□ 2.4
PACRGL-204ENST00000467997 RREB1Q92766 1687 aa30.04■■■□□ 2.4
PACRGL-204ENST00000467997 AEBP1Q8IUX7 1158 aa30.03■■■□□ 2.4
PACRGL-204ENST00000467997 CFAP53Q96M91 514 aa30.03■■■□□ 2.4
PACRGL-204ENST00000467997 COL3A1P02461 1466 aaPredicted RBP30.03■■■□□ 2.4
PACRGL-204ENST00000467997 DOT1LQ8TEK3 1739 aa30.03■■■□□ 2.4
PACRGL-204ENST00000467997 KAT6BQ8WYB5 2073 aa30.03■■■□□ 2.4
PACRGL-204ENST00000467997 PPP2R1AP30153 589 aa30.03■■■□□ 2.4
PACRGL-204ENST00000467997 SYTL4Q96C24 671 aaPredicted RBP30.03■■■□□ 2.4
PACRGL-204ENST00000467997 PRIM1P49642 420 aaKnown RBP30.01■■■□□ 2.39
PACRGL-204ENST00000467997 AMOTQ4VCS5 1084 aa30■■■□□ 2.39
PACRGL-204ENST00000467997 PLEKHO1Q53GL0 409 aaPredicted RBP30■■■□□ 2.39
PACRGL-204ENST00000467997 BTAF1O14981 1849 aa29.99■■■□□ 2.39
PACRGL-204ENST00000467997 IFNL2Q8IZJ0 200 aa29.99■■■□□ 2.39
PACRGL-204ENST00000467997 NUP188Q5SRE5 1749 aa29.98■■■□□ 2.39
PACRGL-204ENST00000467997 NKX1-1Q15270 411 aaPredicted RBP29.97■■■□□ 2.39
PACRGL-204ENST00000467997 PHKG2P15735 406 aa29.96■■■□□ 2.39
PACRGL-204ENST00000467997 NBPF14Q5TI25 921 aa29.95■■■□□ 2.39
PACRGL-204ENST00000467997 U2SURPO15042 1029 aaKnown RBP29.94■■■□□ 2.38
PACRGL-204ENST00000467997 TXNRD1Q16881 649 aa29.94■■■□□ 2.38
PACRGL-204ENST00000467997 HMOX1P09601 288 aa29.93■■■□□ 2.38
PACRGL-204ENST00000467997 ZNF530Q6P9A1 599 aaPredicted RBP29.93■■■□□ 2.38
PACRGL-204ENST00000467997 HSP90AB1P08238 724 aaKnown RBP29.92■■■□□ 2.38
PACRGL-204ENST00000467997 RALBP1Q15311 655 aa29.91■■■□□ 2.38
PACRGL-204ENST00000467997 PROM2Q8N271 834 aa29.91■■■□□ 2.38
PACRGL-204ENST00000467997 NUDCQ9Y266 331 aa29.91■■■□□ 2.38
PACRGL-204ENST00000467997 TOGARAM1Q9Y4F4 1720 aa29.9■■■□□ 2.38
PACRGL-204ENST00000467997 C1orf141Q5JVX7 400 aa29.9■■■□□ 2.38
PACRGL-204ENST00000467997 PSDA5PKW4 1024 aaPredicted RBP29.89■■■□□ 2.37
PACRGL-204ENST00000467997 R3HDM1Q15032 1099 aaKnown RBP29.88■■■□□ 2.37
PACRGL-204ENST00000467997 MPRIPQ6WCQ1 1025 aa29.88■■■□□ 2.37
PACRGL-204ENST00000467997 DCAF5Q96JK2 942 aa29.87■■■□□ 2.37
PACRGL-204ENST00000467997 ZNF316A6NFI3 1004 aaPredicted RBP29.85■■■□□ 2.37
PACRGL-204ENST00000467997 SLC27A3Q5K4L6 730 aa29.85■■■□□ 2.37
PACRGL-204ENST00000467997 TMOD3Q9NYL9 352 aa29.84■■■□□ 2.37
PACRGL-204ENST00000467997 ITGB4P16144 1822 aa29.83■■■□□ 2.37
PACRGL-204ENST00000467997 ERVV-2B6SEH9 535 aa29.81■■■□□ 2.36
PACRGL-204ENST00000467997 U2AF1L5P0DN76 240 aaPredicted RBP29.81■■■□□ 2.36
PACRGL-204ENST00000467997 U2AF1Q01081 240 aaKnown RBP eCLIP29.81■■■□□ 2.36
PACRGL-204ENST00000467997 AKAP4Q5JQC9 854 aa29.81■■■□□ 2.36
PACRGL-204ENST00000467997 PIGBQ92521 554 aa29.81■■■□□ 2.36
PACRGL-204ENST00000467997 SMARCC1Q92922 1105 aaPredicted RBP29.81■■■□□ 2.36
PACRGL-204ENST00000467997 ANO8Q9HCE9 1232 aaPredicted RBP29.81■■■□□ 2.36
PACRGL-204ENST00000467997 SRCAPQ6ZRS2 3230 aa29.81■■■□□ 2.36
PACRGL-204ENST00000467997 KDM6AO15550 1401 aaPredicted RBP29.81■■■□□ 2.36
PACRGL-204ENST00000467997 STK32BQ9NY57 414 aa29.8■■■□□ 2.36
PACRGL-204ENST00000467997 PALLDQ8WX93 1383 aa29.8■■■□□ 2.36
PACRGL-204ENST00000467997 LY75O60449 1722 aa29.8■■■□□ 2.36
PACRGL-204ENST00000467997 MYBBP1AQ9BQG0 1328 aaKnown RBP29.78■■■□□ 2.36
PACRGL-204ENST00000467997 LRRC4BQ9NT99 713 aa29.78■■■□□ 2.36
PACRGL-204ENST00000467997 MTHFSDQ2M296 383 aaKnown RBP29.77■■■□□ 2.36
PACRGL-204ENST00000467997 RSPH6AQ9H0K4 717 aa29.77■■■□□ 2.36
PACRGL-204ENST00000467997 CCNL1Q9UK58 526 aaPredicted RBP29.77■■■□□ 2.36
PACRGL-204ENST00000467997 PAPPAQ13219 1627 aa29.77■■■□□ 2.36
PACRGL-204ENST00000467997 PRKAR2BP31323 418 aa29.76■■■□□ 2.35
PACRGL-204ENST00000467997 GAS2L2Q8NHY3 880 aa29.76■■■□□ 2.35
PACRGL-204ENST00000467997 FCHSD2O94868 740 aa29.75■■■□□ 2.35
PACRGL-204ENST00000467997 HMGB2P26583 209 aaKnown RBP29.75■■■□□ 2.35
PACRGL-204ENST00000467997 CABP4P57796 275 aa29.75■■■□□ 2.35
PACRGL-204ENST00000467997 SLC15A2Q16348 729 aa29.75■■■□□ 2.35
PACRGL-204ENST00000467997 PRKRIP1Q9H875 184 aaPredicted RBP29.72■■■□□ 2.35
PACRGL-204ENST00000467997 KCNQ4P56696 695 aa29.71■■■□□ 2.35
PACRGL-204ENST00000467997 ASAP1Q9ULH1 1129 aa29.7■■■□□ 2.35
PACRGL-204ENST00000467997 SCN11AQ9UI33 1791 aa29.7■■■□□ 2.35
PACRGL-204ENST00000467997 MAP3K5Q99683 1374 aa29.69■■■□□ 2.34
PACRGL-204ENST00000467997 ATG3Q9NT62 314 aa29.68■■■□□ 2.34
PACRGL-204ENST00000467997 RNMTO43148 476 aaKnown RBP29.67■■■□□ 2.34
PACRGL-204ENST00000467997 ZNF827Q17R98 1081 aa29.67■■■□□ 2.34
PACRGL-204ENST00000467997 PHACTR3Q96KR7 559 aa29.67■■■□□ 2.34
PACRGL-204ENST00000467997 MRC1P22897 1456 aa29.67■■■□□ 2.34
PACRGL-204ENST00000467997 LOC102724428A0A0B4J2F2 783 aa29.66■■■□□ 2.34
PACRGL-204ENST00000467997 GNAT3A8MTJ3 354 aa29.66■■■□□ 2.34
PACRGL-204ENST00000467997 NEFMP07197 916 aa29.66■■■□□ 2.34
PACRGL-204ENST00000467997 SIK1P57059 783 aa29.66■■■□□ 2.34
PACRGL-204ENST00000467997 NFATC2IPQ8NCF5 419 aa29.66■■■□□ 2.34
PACRGL-204ENST00000467997 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms