RNA–Protein interactions for RNA: ENST00000467515.1

EPHB4-203, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-203ENST00000467515 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
EPHB4-203ENST00000467515 DLG5Q8TDM6 1919 aa21.78■■□□□ 1.08
EPHB4-203ENST00000467515 TATP17735 454 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-203ENST00000467515 RUNDC1Q96C34 613 aa21.77■■□□□ 1.08
EPHB4-203ENST00000467515 CDCA7Q9BWT1 371 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-203ENST00000467515 PHACTR3Q96KR7 559 aa21.76■■□□□ 1.07
EPHB4-203ENST00000467515 ONECUT3O60422 494 aaPredicted RBP21.75■■□□□ 1.07
EPHB4-203ENST00000467515 CCDC146Q8IYE0 955 aa21.75■■□□□ 1.07
EPHB4-203ENST00000467515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.07
EPHB4-203ENST00000467515 LRRC37A3O60309 1634 aa21.75■■□□□ 1.07
EPHB4-203ENST00000467515 VIRMAQ69YN4 1812 aaKnown RBP21.73■■□□□ 1.07
EPHB4-203ENST00000467515 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
EPHB4-203ENST00000467515 FAM98CQ17RN3 349 aaKnown RBP21.73■■□□□ 1.07
EPHB4-203ENST00000467515 AMOTQ4VCS5 1084 aa21.73■■□□□ 1.07
EPHB4-203ENST00000467515 MAPK8IP3Q9UPT6 1336 aa21.73■■□□□ 1.07
EPHB4-203ENST00000467515 NEFMP07197 916 aa21.72■■□□□ 1.07
EPHB4-203ENST00000467515 PLEKHO1Q53GL0 409 aaPredicted RBP21.72■■□□□ 1.07
EPHB4-203ENST00000467515 POTEAQ6S8J7 498 aa21.72■■□□□ 1.07
EPHB4-203ENST00000467515 MTHFSDQ2M296 383 aaKnown RBP21.71■■□□□ 1.07
EPHB4-203ENST00000467515 ZCRB1Q8TBF4 217 aaKnown RBP21.7■■□□□ 1.06
EPHB4-203ENST00000467515 SPG7Q9UQ90 795 aa21.7■■□□□ 1.06
EPHB4-203ENST00000467515 BRWD3Q6RI45 1802 aa21.7■■□□□ 1.06
EPHB4-203ENST00000467515 TNS2Q63HR2 1409 aa21.7■■□□□ 1.06
EPHB4-203ENST00000467515 APAF1O14727 1248 aa21.68■■□□□ 1.06
EPHB4-203ENST00000467515 RXRBP28702 533 aa21.68■■□□□ 1.06
EPHB4-203ENST00000467515 GAS2L2Q8NHY3 880 aa21.68■■□□□ 1.06
EPHB4-203ENST00000467515 EXOC5O00471 708 aa21.67■■□□□ 1.06
EPHB4-203ENST00000467515 TMPOP42166 694 aaKnown RBP21.67■■□□□ 1.06
EPHB4-203ENST00000467515 NFE2L2Q16236 605 aa21.67■■□□□ 1.06
EPHB4-203ENST00000467515 DDB1Q16531 1140 aa21.67■■□□□ 1.06
EPHB4-203ENST00000467515 PCDH11XQ9BZA7 1347 aa21.66■■□□□ 1.06
EPHB4-203ENST00000467515 PCDH11YQ9BZA8 1340 aa21.66■■□□□ 1.06
EPHB4-203ENST00000467515 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
EPHB4-203ENST00000467515 SCN11AQ9UI33 1791 aa21.66■■□□□ 1.06
EPHB4-203ENST00000467515 ADAMTS7Q9UKP4 1686 aa21.66■■□□□ 1.06
EPHB4-203ENST00000467515 CYP27B1O15528 508 aa21.65■■□□□ 1.06
EPHB4-203ENST00000467515 ZNF530Q6P9A1 599 aaPredicted RBP21.65■■□□□ 1.06
EPHB4-203ENST00000467515 SEPT12Q8IYM1 358 aa21.65■■□□□ 1.06
EPHB4-203ENST00000467515 AKAP4Q5JQC9 854 aa21.64■■□□□ 1.05
EPHB4-203ENST00000467515 IFNL2Q8IZJ0 200 aa21.64■■□□□ 1.05
EPHB4-203ENST00000467515 PHKG2P15735 406 aa21.63■■□□□ 1.05
EPHB4-203ENST00000467515 MAP3K5Q99683 1374 aa21.62■■□□□ 1.05
EPHB4-203ENST00000467515 RIPK4P57078 832 aa21.62■■□□□ 1.05
EPHB4-203ENST00000467515 NGEFQ8N5V2 710 aa21.62■■□□□ 1.05
EPHB4-203ENST00000467515 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
EPHB4-203ENST00000467515 A0A0G2JS52 829 aa21.61■■□□□ 1.05
EPHB4-203ENST00000467515 GNAT3A8MTJ3 354 aa21.61■■□□□ 1.05
EPHB4-203ENST00000467515 HTATSF1O43719 755 aaKnown RBP21.61■■□□□ 1.05
EPHB4-203ENST00000467515 MYT1Q01538 1121 aa21.61■■□□□ 1.05
EPHB4-203ENST00000467515 NKX1-1Q15270 411 aaPredicted RBP21.61■■□□□ 1.05
EPHB4-203ENST00000467515 C1orf141Q5JVX7 400 aa21.61■■□□□ 1.05
EPHB4-203ENST00000467515 RGS12O14924 1447 aa21.61■■□□□ 1.05
EPHB4-203ENST00000467515 NEUROD2Q15784 382 aa21.6■■□□□ 1.05
EPHB4-203ENST00000467515 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
EPHB4-203ENST00000467515 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
EPHB4-203ENST00000467515 TRIM35Q9UPQ4 493 aa21.6■■□□□ 1.05
EPHB4-203ENST00000467515 KAT6BQ8WYB5 2073 aa21.59■■□□□ 1.05
EPHB4-203ENST00000467515 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
EPHB4-203ENST00000467515 TOGARAM1Q9Y4F4 1720 aa21.59■■□□□ 1.05
EPHB4-203ENST00000467515 ITGB4P16144 1822 aa21.58■■□□□ 1.05
EPHB4-203ENST00000467515 SENP3-EIF4A1A0A087X0R7 540 aa21.58■■□□□ 1.05
EPHB4-203ENST00000467515 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.05
EPHB4-203ENST00000467515 PDE3BQ13370 1112 aa21.58■■□□□ 1.05
EPHB4-203ENST00000467515 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
EPHB4-203ENST00000467515 KDM6AO15550 1401 aaPredicted RBP21.57■■□□□ 1.04
EPHB4-203ENST00000467515 SIPA1L3O60292 1781 aaPredicted RBP21.57■■□□□ 1.04
EPHB4-203ENST00000467515 HNRNPUQ00839 825 aaKnown RBP eCLIP21.57■■□□□ 1.04
EPHB4-203ENST00000467515 LMOD3Q0VAK6 560 aa21.57■■□□□ 1.04
EPHB4-203ENST00000467515 DOT1LQ8TEK3 1739 aa21.56■■□□□ 1.04
EPHB4-203ENST00000467515 IL17REQ8NFR9 667 aa21.56■■□□□ 1.04
EPHB4-203ENST00000467515 CEMIPQ8WUJ3 1361 aa21.56■■□□□ 1.04
EPHB4-203ENST00000467515 BCL9O00512 1426 aa21.55■■□□□ 1.04
EPHB4-203ENST00000467515 RNMTO43148 476 aaKnown RBP21.55■■□□□ 1.04
EPHB4-203ENST00000467515 MPRIPQ6WCQ1 1025 aa21.55■■□□□ 1.04
EPHB4-203ENST00000467515 WWC1Q8IX03 1113 aa21.55■■□□□ 1.04
EPHB4-203ENST00000467515 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
EPHB4-203ENST00000467515 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
EPHB4-203ENST00000467515 KRT27Q7Z3Y8 459 aa21.54■■□□□ 1.04
EPHB4-203ENST00000467515 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
EPHB4-203ENST00000467515 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
EPHB4-203ENST00000467515 ZNF521Q96K83 1311 aa21.54■■□□□ 1.04
EPHB4-203ENST00000467515 MRC1P22897 1456 aa21.53■■□□□ 1.04
EPHB4-203ENST00000467515 DCTN1Q14203 1278 aa21.53■■□□□ 1.04
EPHB4-203ENST00000467515 MCM10Q7L590 875 aa21.53■■□□□ 1.04
EPHB4-203ENST00000467515 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
EPHB4-203ENST00000467515 ERVV-2B6SEH9 535 aa21.5■■□□□ 1.03
EPHB4-203ENST00000467515 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
EPHB4-203ENST00000467515 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
EPHB4-203ENST00000467515 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
EPHB4-203ENST00000467515 FAM182BQ5T319 152 aa21.48■■□□□ 1.03
EPHB4-203ENST00000467515 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
EPHB4-203ENST00000467515 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
EPHB4-203ENST00000467515 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
EPHB4-203ENST00000467515 IL16Q14005 1332 aa21.47■■□□□ 1.03
EPHB4-203ENST00000467515 CALD1Q05682 793 aaKnown RBP21.46■■□□□ 1.03
EPHB4-203ENST00000467515 FAM196AQ6ZSG2 479 aa21.46■■□□□ 1.03
EPHB4-203ENST00000467515 TEFQ10587 303 aa21.45■■□□□ 1.02
EPHB4-203ENST00000467515 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
EPHB4-203ENST00000467515 ZNF853P0CG23 659 aa21.44■■□□□ 1.02
EPHB4-203ENST00000467515 CABP4P57796 275 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms