RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 GLI3P10071 1580 aa19.53■□□□□ 0.72
DDX56-208ENST00000467318 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
DDX56-208ENST00000467318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■□□□□ 10.5
DDX56-208ENST00000467318 ONECUT3O60422 494 aaPredicted RBP19.52■□□□□ 0.72
DDX56-208ENST00000467318 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
DDX56-208ENST00000467318 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
DDX56-208ENST00000467318 DISP2A7MBM2 1401 aa19.52■□□□□ 0.72
DDX56-208ENST00000467318 FAM98CQ17RN3 349 aaKnown RBP19.52■□□□□ 0.71
DDX56-208ENST00000467318 MAPK8IP3Q9UPT6 1336 aa19.51■□□□□ 0.71
DDX56-208ENST00000467318 PLEKHO1Q53GL0 409 aaPredicted RBP19.51■□□□□ 0.71
DDX56-208ENST00000467318 MEGF6O75095 1541 aa19.51■□□□□ 0.71
DDX56-208ENST00000467318 OVOS2A0A0G2JMS6 1433 aa19.51■□□□□ 0.71
DDX56-208ENST00000467318 RXRBP28702 533 aa19.5■□□□□ 0.71
DDX56-208ENST00000467318 SPG7Q9UQ90 795 aa19.49■□□□□ 0.71
DDX56-208ENST00000467318 EXOC5O00471 708 aa19.49■□□□□ 0.71
DDX56-208ENST00000467318 CCDC146Q8IYE0 955 aa19.49■□□□□ 0.71
DDX56-208ENST00000467318 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
DDX56-208ENST00000467318 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
DDX56-208ENST00000467318 PARP4Q9UKK3 1724 aaKnown RBP19.48■□□□□ 0.71
DDX56-208ENST00000467318 DDB1Q16531 1140 aa19.47■□□□□ 0.71
DDX56-208ENST00000467318 GAS2L2Q8NHY3 880 aa19.47■□□□□ 0.71
DDX56-208ENST00000467318 WNK3Q9BYP7 1800 aa19.46■□□□□ 0.71
DDX56-208ENST00000467318 A0A0G2JS52 829 aa19.46■□□□□ 0.71
DDX56-208ENST00000467318 MYT1Q01538 1121 aa19.46■□□□□ 0.71
DDX56-208ENST00000467318 MTHFSDQ2M296 383 aaKnown RBP19.46■□□□□ 0.71
DDX56-208ENST00000467318 SEPT12Q8IYM1 358 aa19.45■□□□□ 0.7
DDX56-208ENST00000467318 PCDH11XQ9BZA7 1347 aa19.45■□□□□ 0.7
DDX56-208ENST00000467318 PCDH11YQ9BZA8 1340 aa19.45■□□□□ 0.7
DDX56-208ENST00000467318 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
DDX56-208ENST00000467318 TNS2Q63HR2 1409 aa19.44■□□□□ 0.7
DDX56-208ENST00000467318 APAF1O14727 1248 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 NFE2L2Q16236 605 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 IFNL2Q8IZJ0 200 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 PKD1L3Q7Z443 1732 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 TMPOP42166 694 aaKnown RBP19.43■□□□□ 0.7
DDX56-208ENST00000467318 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
DDX56-208ENST00000467318 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 ZNF530Q6P9A1 599 aaPredicted RBP19.43■□□□□ 0.7
DDX56-208ENST00000467318 NGEFQ8N5V2 710 aa19.43■□□□□ 0.7
DDX56-208ENST00000467318 SENP3-EIF4A1A0A087X0R7 540 aa19.42■□□□□ 0.7
DDX56-208ENST00000467318 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
DDX56-208ENST00000467318 AKAP4Q5JQC9 854 aa19.42■□□□□ 0.7
DDX56-208ENST00000467318 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
DDX56-208ENST00000467318 CYP27B1O15528 508 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 HSP90AB1P08238 724 aaKnown RBP19.4■□□□□ 0.7
DDX56-208ENST00000467318 PHKG2P15735 406 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 RIPK4P57078 832 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 LRRC37A3O60309 1634 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 RGS12O14924 1447 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
DDX56-208ENST00000467318 HTATSF1O43719 755 aaKnown RBP19.4■□□□□ 0.7
DDX56-208ENST00000467318 LMOD3Q0VAK6 560 aa19.39■□□□□ 0.69
DDX56-208ENST00000467318 NKX1-1Q15270 411 aaPredicted RBP19.38■□□□□ 0.69
DDX56-208ENST00000467318 NEUROD2Q15784 382 aa19.38■□□□□ 0.69
DDX56-208ENST00000467318 MAP3K5Q99683 1374 aa19.38■□□□□ 0.69
DDX56-208ENST00000467318 FAM182BQ5T319 152 aa19.37■□□□□ 0.69
DDX56-208ENST00000467318 RTF1Q92541 710 aaKnown RBP19.37■□□□□ 0.69
DDX56-208ENST00000467318 SHANK3Q9BYB0 1731 aa19.37■□□□□ 0.69
DDX56-208ENST00000467318 CCDC27Q2M243 656 aa19.36■□□□□ 0.69
DDX56-208ENST00000467318 MARCH10Q8NA82 808 aaPredicted RBP19.36■□□□□ 0.69
DDX56-208ENST00000467318 DCAF5Q96JK2 942 aa19.36■□□□□ 0.69
DDX56-208ENST00000467318 RRP7AQ9Y3A4 280 aaKnown RBP19.36■□□□□ 0.69
DDX56-208ENST00000467318 BRWD3Q6RI45 1802 aa19.36■□□□□ 0.69
DDX56-208ENST00000467318 KRT27Q7Z3Y8 459 aa19.36■□□□□ 0.69
DDX56-208ENST00000467318 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.69
DDX56-208ENST00000467318 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.69
DDX56-208ENST00000467318 TRIM35Q9UPQ4 493 aa19.33■□□□□ 0.69
DDX56-208ENST00000467318 DLG5Q8TDM6 1919 aa19.32■□□□□ 0.68
DDX56-208ENST00000467318 BCL9O00512 1426 aa19.32■□□□□ 0.68
DDX56-208ENST00000467318 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
DDX56-208ENST00000467318 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
DDX56-208ENST00000467318 RNMTO43148 476 aaKnown RBP19.31■□□□□ 0.68
DDX56-208ENST00000467318 WWC1Q8IX03 1113 aa19.31■□□□□ 0.68
DDX56-208ENST00000467318 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
DDX56-208ENST00000467318 EP400Q96L91 3159 aa19.31■□□□□ 0.68
DDX56-208ENST00000467318 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
DDX56-208ENST00000467318 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
DDX56-208ENST00000467318 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
DDX56-208ENST00000467318 SUPT16HQ9Y5B9 1047 aaKnown RBP19.3■□□□□ 0.68
DDX56-208ENST00000467318 CALD1Q05682 793 aaKnown RBP19.3■□□□□ 0.68
DDX56-208ENST00000467318 MCM10Q7L590 875 aa19.3■□□□□ 0.68
DDX56-208ENST00000467318 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
DDX56-208ENST00000467318 DCTN1Q14203 1278 aa19.29■□□□□ 0.68
DDX56-208ENST00000467318 ADAMTS7Q9UKP4 1686 aa19.28■□□□□ 0.68
DDX56-208ENST00000467318 TEFQ10587 303 aa19.27■□□□□ 0.68
DDX56-208ENST00000467318 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
DDX56-208ENST00000467318 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.68
DDX56-208ENST00000467318 CABP4P57796 275 aa19.27■□□□□ 0.67
DDX56-208ENST00000467318 SLC52A2Q9HAB3 445 aa19.27■□□□□ 0.67
DDX56-208ENST00000467318 ZNF521Q96K83 1311 aa19.26■□□□□ 0.67
DDX56-208ENST00000467318 ILDR2Q71H61 639 aa19.26■□□□□ 0.67
DDX56-208ENST00000467318 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
DDX56-208ENST00000467318 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
DDX56-208ENST00000467318 THUMPD2Q9BTF0 503 aaKnown RBP19.25■□□□□ 0.67
DDX56-208ENST00000467318 PRIM1P49642 420 aaKnown RBP19.24■□□□□ 0.67
DDX56-208ENST00000467318 TAF7Q15545 349 aaPredicted RBP19.24■□□□□ 0.67
DDX56-208ENST00000467318 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
DDX56-208ENST00000467318 IL16Q14005 1332 aa19.24■□□□□ 0.67
DDX56-208ENST00000467318 PTF1AQ7RTS3 328 aa19.24■□□□□ 0.67
DDX56-208ENST00000467318 BABAM1Q9NWV8 329 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms