RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 CNGB1Q14028 1251 aaPredicted RBP31.44■■■□□ 2.62
SUMO3-205ENST00000466861 PKD1L3Q7Z443 1732 aa31.43■■■□□ 2.62
SUMO3-205ENST00000466861 SHANK3Q9BYB0 1731 aa31.43■■■□□ 2.62
SUMO3-205ENST00000466861 TNS1Q9HBL0 1735 aaKnown RBP31.42■■■□□ 2.62
SUMO3-205ENST00000466861 DIAPH1O60610 1272 aaKnown RBP31.42■■■□□ 2.62
SUMO3-205ENST00000466861 RALBP1Q15311 655 aa31.42■■■□□ 2.62
SUMO3-205ENST00000466861 CFAP53Q96M91 514 aa31.42■■■□□ 2.62
SUMO3-205ENST00000466861 KDRP35968 1356 aa31.41■■■□□ 2.62
SUMO3-205ENST00000466861 COL3A1P02461 1466 aaPredicted RBP31.4■■■□□ 2.62
SUMO3-205ENST00000466861 TRIM37O94972 964 aa31.39■■■□□ 2.62
SUMO3-205ENST00000466861 BAG6P46379 1132 aa31.39■■■□□ 2.62
SUMO3-205ENST00000466861 PCDH11XQ9BZA7 1347 aa31.39■■■□□ 2.62
SUMO3-205ENST00000466861 PCDH11YQ9BZA8 1340 aa31.39■■■□□ 2.62
SUMO3-205ENST00000466861 SPG7Q9UQ90 795 aa31.38■■■□□ 2.61
SUMO3-205ENST00000466861 DDX54Q8TDD1 881 aaKnown RBP31.37■■■□□ 2.61
SUMO3-205ENST00000466861 BCL11BQ9C0K0 894 aaPredicted RBP31.37■■■□□ 2.61
SUMO3-205ENST00000466861 KAT6BQ8WYB5 2073 aa31.34■■■□□ 2.61
SUMO3-205ENST00000466861 NHSQ6T4R5 1651 aa31.33■■■□□ 2.61
SUMO3-205ENST00000466861 SULT6B1Q6IMI4 303 aa31.33■■■□□ 2.61
SUMO3-205ENST00000466861 AMOTQ4VCS5 1084 aa31.32■■■□□ 2.6
SUMO3-205ENST00000466861 NUDCQ9Y266 331 aa31.31■■■□□ 2.6
SUMO3-205ENST00000466861 APBA3O96018 575 aa31.3■■■□□ 2.6
SUMO3-205ENST00000466861 PLEKHO1Q53GL0 409 aaPredicted RBP31.3■■■□□ 2.6
SUMO3-205ENST00000466861 RGPD3A6NKT7 1758 aaPredicted RBP31.3■■■□□ 2.6
SUMO3-205ENST00000466861 RGPD4Q7Z3J3 1758 aa31.3■■■□□ 2.6
SUMO3-205ENST00000466861 CYP27B1O15528 508 aa31.28■■■□□ 2.6
SUMO3-205ENST00000466861 NKX1-1Q15270 411 aaPredicted RBP31.28■■■□□ 2.6
SUMO3-205ENST00000466861 DEFB132Q7Z7B7 95 aa31.28■■■□□ 2.6
SUMO3-205ENST00000466861 AEBP1Q8IUX7 1158 aa31.28■■■□□ 2.6
SUMO3-205ENST00000466861 PLSCR1O15162 318 aa31.27■■■□□ 2.6
SUMO3-205ENST00000466861 IFNL2Q8IZJ0 200 aa31.26■■■□□ 2.59
SUMO3-205ENST00000466861 MYBBP1AQ9BQG0 1328 aaKnown RBP31.25■■■□□ 2.59
SUMO3-205ENST00000466861 CAMKK2Q96RR4 588 aa31.24■■■□□ 2.59
SUMO3-205ENST00000466861 DOT1LQ8TEK3 1739 aa31.24■■■□□ 2.59
SUMO3-205ENST00000466861 U2SURPO15042 1029 aaKnown RBP31.23■■■□□ 2.59
SUMO3-205ENST00000466861 PRKRIP1Q9H875 184 aaPredicted RBP31.23■■■□□ 2.59
SUMO3-205ENST00000466861 PHKG2P15735 406 aa31.22■■■□□ 2.59
SUMO3-205ENST00000466861 EN1Q05925 392 aaPredicted RBP31.22■■■□□ 2.59
SUMO3-205ENST00000466861 KCNQ2O43526 872 aa31.21■■■□□ 2.59
SUMO3-205ENST00000466861 HSP90AB1P08238 724 aaKnown RBP31.21■■■□□ 2.59
SUMO3-205ENST00000466861 ACSBG1Q96GR2 724 aa31.21■■■□□ 2.59
SUMO3-205ENST00000466861 BTAF1O14981 1849 aa31.2■■■□□ 2.59
SUMO3-205ENST00000466861 HMOX1P09601 288 aa31.2■■■□□ 2.59
SUMO3-205ENST00000466861 PTF1AQ7RTS3 328 aa31.19■■■□□ 2.58
SUMO3-205ENST00000466861 RREB1Q92766 1687 aa31.17■■■□□ 2.58
SUMO3-205ENST00000466861 PRIM1P49642 420 aaKnown RBP31.17■■■□□ 2.58
SUMO3-205ENST00000466861 ZNF530Q6P9A1 599 aaPredicted RBP31.17■■■□□ 2.58
SUMO3-205ENST00000466861 EZH2Q15910 746 aaKnown RBP31.16■■■□□ 2.58
SUMO3-205ENST00000466861 FCHSD2O94868 740 aa31.15■■■□□ 2.58
SUMO3-205ENST00000466861 C1orf141Q5JVX7 400 aa31.15■■■□□ 2.58
SUMO3-205ENST00000466861 ITGB4P16144 1822 aa31.14■■■□□ 2.58
SUMO3-205ENST00000466861 U2AF1L5P0DN76 240 aaPredicted RBP31.14■■■□□ 2.58
SUMO3-205ENST00000466861 U2AF1Q01081 240 aaKnown RBP eCLIP31.14■■■□□ 2.58
SUMO3-205ENST00000466861 DCAF5Q96JK2 942 aa31.14■■■□□ 2.58
SUMO3-205ENST00000466861 TOGARAM1Q9Y4F4 1720 aa31.13■■■□□ 2.57
SUMO3-205ENST00000466861 AKAP4Q5JQC9 854 aa31.12■■■□□ 2.57
SUMO3-205ENST00000466861 SYTL4Q96C24 671 aaPredicted RBP31.12■■■□□ 2.57
SUMO3-205ENST00000466861 RSPH6AQ9H0K4 717 aa31.12■■■□□ 2.57
SUMO3-205ENST00000466861 ERVV-2B6SEH9 535 aa31.1■■■□□ 2.57
SUMO3-205ENST00000466861 GAS2L2Q8NHY3 880 aa31.09■■■□□ 2.57
SUMO3-205ENST00000466861 NUP188Q5SRE5 1749 aa31.08■■■□□ 2.57
SUMO3-205ENST00000466861 PNNQ9H307 717 aaKnown RBP31.08■■■□□ 2.57
SUMO3-205ENST00000466861 PRKAR2BP31323 418 aa31.07■■■□□ 2.56
SUMO3-205ENST00000466861 MTHFSDQ2M296 383 aaKnown RBP31.07■■■□□ 2.56
SUMO3-205ENST00000466861 SCN11AQ9UI33 1791 aa31.05■■■□□ 2.56
SUMO3-205ENST00000466861 TXNRD1Q16881 649 aa31.05■■■□□ 2.56
SUMO3-205ENST00000466861 KDM6AO15550 1401 aaPredicted RBP31.05■■■□□ 2.56
SUMO3-205ENST00000466861 LY75O60449 1722 aa31.04■■■□□ 2.56
SUMO3-205ENST00000466861 HMGB2P26583 209 aaKnown RBP31.04■■■□□ 2.56
SUMO3-205ENST00000466861 SLC27A3Q5K4L6 730 aa31.04■■■□□ 2.56
SUMO3-205ENST00000466861 MPRIPQ6WCQ1 1025 aa31.04■■■□□ 2.56
SUMO3-205ENST00000466861 PROM2Q8N271 834 aa31.04■■■□□ 2.56
SUMO3-205ENST00000466861 SMARCC1Q92922 1105 aaPredicted RBP31.04■■■□□ 2.56
SUMO3-205ENST00000466861 TMOD3Q9NYL9 352 aa31.04■■■□□ 2.56
SUMO3-205ENST00000466861 ANP32CO43423 234 aa31.03■■■□□ 2.56
SUMO3-205ENST00000466861 ADAMTS7Q9UKP4 1686 aa31.03■■■□□ 2.56
SUMO3-205ENST00000466861 NBPF14Q5TI25 921 aa31.02■■■□□ 2.56
SUMO3-205ENST00000466861 PIGBQ92521 554 aa31.02■■■□□ 2.56
SUMO3-205ENST00000466861 NEFMP07197 916 aa31.01■■■□□ 2.55
SUMO3-205ENST00000466861 VIRMAQ69YN4 1812 aaKnown RBP31■■■□□ 2.55
SUMO3-205ENST00000466861 PHACTR3Q96KR7 559 aa30.99■■■□□ 2.55
SUMO3-205ENST00000466861 MAP3K5Q99683 1374 aa30.98■■■□□ 2.55
SUMO3-205ENST00000466861 GNAT3A8MTJ3 354 aa30.97■■■□□ 2.55
SUMO3-205ENST00000466861 CABP4P57796 275 aa30.97■■■□□ 2.55
SUMO3-205ENST00000466861 MRC1P22897 1456 aa30.96■■■□□ 2.55
SUMO3-205ENST00000466861 RNMTO43148 476 aaKnown RBP30.96■■■□□ 2.55
SUMO3-205ENST00000466861 PLEKHF1Q96S99 279 aa30.96■■■□□ 2.55
SUMO3-205ENST00000466861 PALLDQ8WX93 1383 aa30.95■■■□□ 2.55
SUMO3-205ENST00000466861 HTATSF1O43719 755 aaKnown RBP30.93■■■□□ 2.54
SUMO3-205ENST00000466861 WDR43Q15061 677 aaKnown RBP eCLIP30.93■■■□□ 2.54
SUMO3-205ENST00000466861 PAPPAQ13219 1627 aa30.92■■■□□ 2.54
SUMO3-205ENST00000466861 SLC52A2Q9HAB3 445 aa30.92■■■□□ 2.54
SUMO3-205ENST00000466861 NFATC2IPQ8NCF5 419 aa30.9■■■□□ 2.54
SUMO3-205ENST00000466861 LGR6Q9HBX8 967 aa30.9■■■□□ 2.54
SUMO3-205ENST00000466861 ATG3Q9NT62 314 aa30.9■■■□□ 2.54
SUMO3-205ENST00000466861 LRRC4BQ9NT99 713 aa30.9■■■□□ 2.54
SUMO3-205ENST00000466861 CCNL1Q9UK58 526 aaPredicted RBP30.9■■■□□ 2.54
SUMO3-205ENST00000466861 ZNF831Q5JPB2 1677 aa30.9■■■□□ 2.54
SUMO3-205ENST00000466861 ASAP1Q9ULH1 1129 aa30.89■■■□□ 2.54
SUMO3-205ENST00000466861 MAPK8IP3Q9UPT6 1336 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms